Factsheet for GSMUA_AchrUn_randomP05550_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P08840_001	Banana	cytosol	79.87	91.79
Solyc03g097800.2.1	Tomato	nucleus	43.51	77.01
TraesCS1B01G475400.3	Wheat	golgi	72.08	29.21
EES20054	Sorghum	plastid	71.43	29.18
TraesCS1D01G449200.3	Wheat	cytosol	71.43	28.95
TraesCS1A01G440200.1	Wheat	cytosol	71.43	28.95
Os05t0593100-01	Rice	plasma membrane	70.78	28.91
Zm00001d039157_P001	Maize	plastid	68.83	28.12
TraesCS5A01G063700.1	Wheat	cytosol	44.16	28.1
HORVU1Hr1G094800.2	Barley	cytosol, endoplasmic reticulum, mitochondrion	70.78	27.66
Zm00001d044665_P001	Maize	plastid	67.53	27.59
KXG22879	Sorghum	plastid	69.48	25.97
TraesCS1A01G282100.1	Wheat	cytosol	60.39	24.6
TraesCS1D01G281400.1	Wheat	cytosol	59.74	24.4
TraesCS1B01G291300.1	Wheat	cytosol	59.09	24.14
TraesCS7A01G285700.1	Wheat	cytosol	8.44	8.97
Zm00001d012311_P001	Maize	plastid	9.09	6.97
GSMUA_Achr4P08830_001	Banana	mitochondrion, plastid	5.84	3.53
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	5.84	3.49
KRH62549	Soybean	mitochondrion	1.95	2.17

Protein Annotations

Gene3D:1.20.1460.10	MapMan:24.1.1.2.3	InterPro:ATPase_V1-cplx_csu	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0015078	GO:GO:0015991	GO:GO:0015992
GO:GO:0016020	GO:GO:0033180	EnsemblPlantsGene:GSMUA_AchrUn_randomG05550_001	EnsemblPlants:GSMUA_AchrUn_randomP05550_001	EnsemblPlants:GSMUA_AchrUn_randomT05550_001	UniProt:M0U6L7
PFAM:PF03223	PANTHER:PTHR10137	PANTHER:PTHR10137:SF0	SUPFAM:SSF118203	UniParc:UPI000296D056	InterPro:Vac_ATP_synth_c_sf
SEG:seg	:	:	:	:	:

Description

V-type proton ATPase subunit C [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG05550_001]

Coordinates

chrchrUn_random:-:22770166..22772866

Molecular Weight (calculated)

17604.0 Da

IEP (calculated)

4.596

GRAVY (calculated)

-0.112

Length

154 amino acids

Sequence
(BLAST)

001: MLEPFLELSE NSQMCISFHL RFLNGQIREF EYSPEAQESR KQELEKLIQD QESKRSSLLQ WCYASYGEVF SSWMHFCAVR VFAESILRYG LPPSFLAVVL
101: APLVKSEKKV RGILEELCGN VNSSYWKSED EIGLAGIGGE AEAYPYVSFT INLV

Best Arabidopsis Sequence Match ( AT1G12840.1 )
(BLAST)

001: MTSRYWVVSL PVKDSASSLW NRLQEQISKH SFDTPVYRFN IPNLRVGTLD SLLALGDDLL KSNSFVEGVS QKIRRQIEEL ERISGVESNA LTVDGVPVDS
101: YLTRFVWDEA KYPTMSPLKE VVDNIQSQVA KIEDDLKVRV AEYNNIRGQL NAINRKQSGS LAVRDLSNLV KPEDIVESEH LVTLLAVVPK YSQKDWLACY
201: ETLTDYVVPR SSKKLFEDNE YALYTVTLFT RVADNFRIAA REKGFQVRDF EQSVEAQETR KQELAKLVQD QESLRSSLLQ WCYTSYGEVF SSWMHFCAVR
301: TFAESIMRYG LPPAFLACVL SPAVKSEKKV RSILERLCDS TNSLYWKSEE DAGAMAGLAG DSETHPYVSF TINLA

Arabidopsis Description

VHA-CV-type proton ATPase subunit C [Source:UniProtKB/TrEMBL;Acc:A0A178WM16]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.