Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G101810.4 | Barley | plastid | 74.15 | 63.37 |
| TraesCS7A01G450600.1 | Wheat | golgi, plastid | 80.95 | 62.3 |
| TraesCS7B01G350400.1 | Wheat | plastid | 80.95 | 62.3 |
| TraesCS7D01G439900.1 | Wheat | plastid | 80.95 | 62.3 |
| Os06t0683200-01 | Rice | plastid | 70.75 | 54.74 |
| EER90241 | Sorghum | plastid | 70.75 | 54.74 |
| CDY43032 | Canola | cytosol | 44.22 | 50.78 |
| Bra029017.1-P | Field mustard | cytosol | 44.22 | 50.78 |
| Zm00001d014488_P001 | Maize | plastid | 71.43 | 50.72 |
| KRH22214 | Soybean | nucleus, plastid | 59.86 | 45.36 |
| KRH27125 | Soybean | plastid | 59.86 | 45.36 |
| GSMUA_Achr8P33170_001 | Banana | plastid | 58.5 | 45.26 |
| VIT_19s0014g04970.t01 | Wine grape | plastid | 58.5 | 45.03 |
| CDY18341 | Canola | plastid | 58.5 | 43.88 |
| AT5G54600.1 | Thale cress | plastid | 57.14 | 42.42 |
| PGSC0003DMT400049598 | Potato | plastid | 54.42 | 42.33 |
| Bra002973.1-P | Field mustard | plastid | 56.46 | 41.71 |
| CDY42463 | Canola | plastid | 56.46 | 41.71 |
| CDY06636 | Canola | plastid | 56.46 | 41.71 |
| CDY28762 | Canola | plastid | 56.46 | 41.29 |
| Bra022734.1-P | Field mustard | plastid | 56.46 | 41.29 |
| Solyc07g063960.2.1 | Tomato | nucleus | 53.06 | 41.27 |
| CDY43816 | Canola | nucleus | 35.37 | 30.23 |
| PGSC0003DMT400064380 | Potato | plastid | 52.38 | 29.5 |
| HORVU4Hr1G026060.1 | Barley | cytosol | 24.49 | 22.64 |
Protein Annotations
| MapMan:17.7.2.1.22 | Gene3D:2.30.30.30 | UniProt:A0A287HBV8 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:HORVU2Hr1G022000 |
| EnsemblPlants:HORVU2Hr1G022000.2 | InterPro:IPR014722 | InterPro:KOW | HAMAP:MF_01326_B | PFAM:PF00467 | PFAM:PF17136 |
| ScanProsite:PS01108 | PANTHER:PTHR12903 | PANTHER:PTHR12903:SF0 | InterPro:Rib_L2_dom2 | InterPro:Ribosomal_L24 | InterPro:Ribosomal_L24/26_CS |
| SMART:SM00739 | SUPFAM:SSF50104 | TIGRFAMs:TIGR01079 | InterPro:Translation_prot_SH3-like_sf | UniParc:UPI000B487F57 | : |
Description
No Description!
Coordinates
chrchr2H:-:62703769..62704596
Molecular Weight (calculated)
17058.3 Da
IEP (calculated)
10.797
GRAVY (calculated)
-0.520
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: RKKLILESKV RFMAKTSPIE MRLKRWERKK CKPNSLTMLH KMHVRVGDTV QVIAGREKGK VGEVVRLYKH NSTVIVKDLN LNSKHKKGTE DEPGEIVMIE
101: GPIHSSNMML YSKEKNVTSR VGHKILEDGT KVRYLKRVML YDLLSFI
101: GPIHSSNMML YSKEKNVTSR VGHKILEDGT KVRYLKRVML YDLLSFI
001: MATMSALQSS FTSLSLSPSS SFLGQRLISP ISLSVTSPVK PAENPCLVLA KLKRWERKEC KPNSLPILHK MHVKFGDTVK VISGRDKGKI GEVTKIFTHN
101: STIVIKDVNL KTKHMKSREE GEPGQIVKIE APIHSSNVML YSKEKDVVSR VGHKVLEDGQ KVRYLIKTGE LIDTIEKWKL LKEAKDKETT QVAVTSAS
101: STIVIKDVNL KTKHMKSREE GEPGQIVKIE APIHSSNVML YSKEKDVVSR VGHKVLEDGQ KVRYLIKTGE LIDTIEKWKL LKEAKDKETT QVAVTSAS
Arabidopsis Description
RPL24SVR8 [Source:UniProtKB/TrEMBL;Acc:A0A178U954]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.