Factsheet for HORVU7Hr1G101810.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G022000.2	Barley	cytosol	63.37	74.15
Os06t0683200-01	Rice	plastid	76.74	69.47
EER90241	Sorghum	plastid	76.16	68.95
Zm00001d014488_P001	Maize	plastid	75.0	62.32
Bra029017.1-P	Field mustard	cytosol	41.86	56.25
CDY43032	Canola	cytosol	41.86	56.25
GSMUA_Achr8P33170_001	Banana	plastid	60.47	54.74
TraesCS1B01G204000.1	Wheat	endoplasmic reticulum, extracellular	39.53	53.12
CDY18341	Canola	plastid	56.98	50.0
KRH27125	Soybean	plastid	56.4	50.0
VIT_19s0014g04970.t01	Wine grape	plastid	55.23	49.74
KRH22214	Soybean	nucleus, plastid	55.81	49.48
PGSC0003DMT400049598	Potato	plastid	53.49	48.68
Solyc07g063960.2.1	Tomato	nucleus	52.33	47.62
AT5G54600.1	Thale cress	plastid	54.65	47.47
CDY42463	Canola	plastid	54.65	47.24
CDY06636	Canola	plastid	54.65	47.24
Bra002973.1-P	Field mustard	plastid	54.65	47.24
CDY28762	Canola	plastid	53.49	45.77
Bra022734.1-P	Field mustard	plastid	53.49	45.77
PGSC0003DMT400064380	Potato	plastid	51.74	34.1
CDY43816	Canola	nucleus	32.56	32.56
HORVU4Hr1G026060.1	Barley	cytosol	22.67	24.53

Protein Annotations

MapMan:17.7.2.1.22	Gene3D:2.30.30.30	UniProt:A0A287XLU8	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU7Hr1G101810
EnsemblPlants:HORVU7Hr1G101810.4	InterPro:IPR014722	InterPro:KOW	HAMAP:MF_01326_B	PFAM:PF00467	PFAM:PF17136
ScanProsite:PS01108	PANTHER:PTHR12903	PANTHER:PTHR12903:SF0	InterPro:Rib_L2_dom2	InterPro:Ribosomal_L24	InterPro:Ribosomal_L24/26_CS
SMART:SM00739	SUPFAM:SSF50104	TIGRFAMs:TIGR01079	InterPro:Translation_prot_SH3-like_sf	UniParc:UPI000B470F79	SEG:seg

Description

No Description!

Coordinates

chrchr7H:+:610743744..610745606

Molecular Weight (calculated)

19206.2 Da

IEP (calculated)

10.533

GRAVY (calculated)

-0.784

Length

172 amino acids

Sequence
(BLAST)

001: APAPSGATRS PPPSPPRRLG SDSWPRQAQL KCGLKRWERK KCKPNSLPML HKMHVRVGDT VQVIAGREKG KVGEVVRLYK HNSTVIVKDL NLKSKHKKGT
101: EDEPGEIVMI EGPIHSSNMM LYSKEKNVTS RVGHKILEDG TKVRYLKKTG EVIDSVDNWV KVFKEGDSES SS

Best Arabidopsis Sequence Match ( AT5G54600.1 )
(BLAST)

001: MATMSALQSS FTSLSLSPSS SFLGQRLISP ISLSVTSPVK PAENPCLVLA KLKRWERKEC KPNSLPILHK MHVKFGDTVK VISGRDKGKI GEVTKIFTHN
101: STIVIKDVNL KTKHMKSREE GEPGQIVKIE APIHSSNVML YSKEKDVVSR VGHKVLEDGQ KVRYLIKTGE LIDTIEKWKL LKEAKDKETT QVAVTSAS

Arabidopsis Description

RPL24SVR8 [Source:UniProtKB/TrEMBL;Acc:A0A178U954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.