Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G101810.4 | Barley | plastid | 53.12 | 39.53 |
| TraesCS7B01G350400.1 | Wheat | plastid | 53.12 | 35.6 |
| Os06t0683200-01 | Rice | plastid | 50.78 | 34.21 |
| EER90241 | Sorghum | plastid | 50.78 | 34.21 |
| Zm00001d014488_P001 | Maize | plastid | 50.78 | 31.4 |
| GSMUA_Achr8P33170_001 | Banana | plastid | 44.53 | 30.0 |
| KRH27125 | Soybean | plastid | 41.41 | 27.32 |
| KRH22214 | Soybean | nucleus, plastid | 40.62 | 26.8 |
| AT5G54600.1 | Thale cress | plastid | 41.41 | 26.77 |
| CDY18341 | Canola | plastid | 40.62 | 26.53 |
| PGSC0003DMT400049598 | Potato | plastid | 37.5 | 25.4 |
| Solyc07g063960.2.1 | Tomato | nucleus | 37.5 | 25.4 |
| CDY28762 | Canola | plastid | 39.84 | 25.37 |
| Bra022734.1-P | Field mustard | plastid | 39.84 | 25.37 |
| VIT_19s0014g04970.t01 | Wine grape | plastid | 37.5 | 25.13 |
| CDY06636 | Canola | plastid | 39.06 | 25.13 |
| CDY43032 | Canola | cytosol | 25.0 | 25.0 |
| Bra029017.1-P | Field mustard | cytosol | 25.0 | 25.0 |
| Bra002973.1-P | Field mustard | plastid | 38.28 | 24.62 |
| CDY42463 | Canola | plastid | 38.28 | 24.62 |
| CDY43816 | Canola | nucleus | 31.25 | 23.26 |
| PGSC0003DMT400064380 | Potato | plastid | 37.5 | 18.39 |
| TraesCS4B01G132600.1 | Wheat | cytosol | 17.19 | 13.84 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G204000.1 | EnsemblPlantsGene:TraesCS1B01G204000 | InterPro:Translation_prot_SH3-like_sf | SignalP:SignalP-noTM | SUPFAM:SSF50104 | TMHMM:TMhelix |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1B:-:367981824..367984410
Molecular Weight (calculated)
14889.4 Da
IEP (calculated)
8.222
GRAVY (calculated)
-0.222
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVFLFLSTP LPLSMWTCFL IMLKQWERKY CKPNNCPMPY KMHVRVSDTV QVITGHENSK VGEVDLNLKS KHNKCIEDEL GEIVMKNMMS RVGNHLLEDG
101: TKVHYLKKID VVMCNVDIQV KVFNERDS
101: TKVHYLKKID VVMCNVDIQV KVFNERDS
001: MATMSALQSS FTSLSLSPSS SFLGQRLISP ISLSVTSPVK PAENPCLVLA KLKRWERKEC KPNSLPILHK MHVKFGDTVK VISGRDKGKI GEVTKIFTHN
101: STIVIKDVNL KTKHMKSREE GEPGQIVKIE APIHSSNVML YSKEKDVVSR VGHKVLEDGQ KVRYLIKTGE LIDTIEKWKL LKEAKDKETT QVAVTSAS
101: STIVIKDVNL KTKHMKSREE GEPGQIVKIE APIHSSNVML YSKEKDVVSR VGHKVLEDGQ KVRYLIKTGE LIDTIEKWKL LKEAKDKETT QVAVTSAS
Arabidopsis Description
RPL24SVR8 [Source:UniProtKB/TrEMBL;Acc:A0A178U954]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.