CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22214	Soybean	nucleus, plastid	92.27	92.27
VIT_19s0014g04970.t01	Wine grape	plastid	70.62	71.73
GSMUA_Achr8P33170_001	Banana	plastid	68.56	70.0
PGSC0003DMT400049598	Potato	plastid	68.04	69.84
Solyc07g063960.2.1	Tomato	nucleus	68.04	69.84
Bra029017.1-P	Field mustard	cytosol	45.36	68.75
CDY43032	Canola	cytosol	45.36	68.75
CDY18341	Canola	plastid	66.49	65.82
AT5G54600.1	Thale cress	plastid	66.49	65.15
Bra002973.1-P	Field mustard	plastid	66.49	64.82
CDY42463	Canola	plastid	66.49	64.82
Os06t0683200-01	Rice	plastid	62.89	64.21
CDY06636	Canola	plastid	65.46	63.82
EER90241	Sorghum	plastid	61.34	62.63
CDY28762	Canola	plastid	63.4	61.19
Bra022734.1-P	Field mustard	plastid	63.4	61.19
TraesCS7D01G439900.1	Wheat	plastid	59.28	60.21
TraesCS7B01G350400.1	Wheat	plastid	59.28	60.21
TraesCS7A01G450600.1	Wheat	golgi, plastid	59.28	60.21
HORVU2Hr1G022000.2	Barley	cytosol	45.36	59.86
Zm00001d014488_P001	Maize	plastid	61.34	57.49
HORVU7Hr1G101810.4	Barley	plastid	50.0	56.4
PGSC0003DMT400064380	Potato	plastid	69.07	51.34
TraesCS1B01G204000.1	Wheat	endoplasmic reticulum, extracellular	27.32	41.41
CDY43816	Canola	nucleus	35.57	40.12
KRH49799	Soybean	cytosol	21.13	25.79
KRH05093	Soybean	cytosol	20.62	25.16
KRG99034	Soybean	cytosol	17.53	24.64
KRH71399	Soybean	mitochondrion	23.2	20.09

Protein Annotations

MapMan:17.7.2.1.22	Gene3D:2.30.30.30	UniProt:A0A0R0HID3	EMBL:ACUP02007774	EnsemblPlantsGene:GLYMA_12G215900	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	GO:GO:0030529	InterPro:IPR014722	InterPro:KOW	EnsemblPlants:KRH27125	ProteinID:KRH27125
ProteinID:KRH27125.1	HAMAP:MF_01326_B	PFAM:PF00467	PFAM:PF17136	ScanProsite:PS01108	PANTHER:PTHR12903
PANTHER:PTHR12903:SF0	InterPro:Rib_L2_dom2	InterPro:Ribosomal_L24	InterPro:Ribosomal_L24/26_CS	SMART:SM00739	SUPFAM:SSF50104
TIGRFAMs:TIGR01079	InterPro:Translation_prot_SH3-like_sf	UniParc:UPI00018C69AA	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr12:-:37501801..37505009

Molecular Weight (calculated)

21401.4 Da

IEP (calculated)

10.660

GRAVY (calculated)

-0.405

Length

194 amino acids

Sequence
(BLAST)

001: MAAMAALQSS MAGLSLSSKS FLGQLLPPIT LPSLLPGKST EKQCPIVMRL KRWERKECKP NSLPILHKMH VKLGDTVQVI SGRERGKVGE ITKIFKHNST
101: VIVKDLNLKT KHVKSREEGE PGQIIKIEGP IHSSNVMLYS KDQKVASRVG HKVLDNGKKV RYLIKTGEII DSSENWKKLK EATKKSEEAA AAAA

Best Arabidopsis Sequence Match ( AT5G54600.1 )
(BLAST)

001: MATMSALQSS FTSLSLSPSS SFLGQRLISP ISLSVTSPVK PAENPCLVLA KLKRWERKEC KPNSLPILHK MHVKFGDTVK VISGRDKGKI GEVTKIFTHN
101: STIVIKDVNL KTKHMKSREE GEPGQIVKIE APIHSSNVML YSKEKDVVSR VGHKVLEDGQ KVRYLIKTGE LIDTIEKWKL LKEAKDKETT QVAVTSAS

Arabidopsis Description

RPL24SVR8 [Source:UniProtKB/TrEMBL;Acc:A0A178U954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.