Factsheet for HORVU2Hr1G099380.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol, golgi, plasma membrane, endoplasmic reticulum, vacuole

Predictor Summary:

mitochondrion 1
cytosol 1
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	secretory

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042031_P001	Maize	cytosol	73.0	85.88
Zm00001d041399_P001	Maize	cytosol	81.0	50.0
Zm00001d000079_P001	Maize	cytosol	60.0	39.47
HORVU2Hr1G099460.4	Barley	cytosol, plastid	85.0	29.21
Os04t0612600-02	Rice	cytosol	79.0	27.53
GSMUA_Achr2P03150_001	Banana	cytosol	70.0	24.14
VIT_10s0003g05630.t01	Wine grape	extracellular	69.0	23.88
AT2G34840.1	Thale cress	cytosol	69.0	23.55
Solyc02g030250.2.1	Tomato	cytosol	67.0	23.02
PGSC0003DMT400080641	Potato	cytosol	66.0	22.68
CDY67686	Canola	cytosol	66.0	22.53
Bra021935.1-P	Field mustard	cytosol	66.0	22.53
Bra022994.1-P	Field mustard	cytosol	66.0	22.53
CDX79587	Canola	cytosol	66.0	22.53
CDX84626	Canola	cytosol	66.0	22.53
PGSC0003DMT400054458	Potato	cytosol	65.0	22.34
AT1G30630.1	Thale cress	cytosol	64.0	21.92
GSMUA_Achr7P16810_001	Banana	cytosol	61.0	21.18
CDY02313	Canola	cytosol	60.0	20.48
Bra032410.1-P	Field mustard	cytosol	60.0	20.48
CDY09554	Canola	cytosol	60.0	20.48
KRH11873	Soybean	endoplasmic reticulum	57.0	19.66
KRH36897	Soybean	endoplasmic reticulum	57.0	19.66
CDY70767	Canola	cytosol	42.0	19.63
Solyc02g069590.2.1	Tomato	nucleus	31.0	11.03

Protein Annotations

EnsemblPlants:HORVU2Hr1G099380.1	EnsemblPlantsGene:HORVU2Hr1G099380	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005198	GO:GO:0005488
GO:GO:0005515	GO:GO:0006810	GO:GO:0006890	GO:GO:0008150	InterPro:Coatomer_esu	InterPro:IPR011990
InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR10805	PANTHER:PTHR10805:SF1	PFAM:PF04733	UniParc:UPI000B460BFF	UniProt:A0A287J509
MapMan:22.3.1.3	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:687479393..687480594

Molecular Weight (calculated)

10675.9 Da

IEP (calculated)

4.661

GRAVY (calculated)

0.374

Length

100 amino acids

Sequence
(BLAST)

1: RVVMXVQLVI SEIDSSAATS LQAVKLLALY LTGDKEGAIS SLKEWLSDSA IGSNPVLRLI AGIIFMHEQD YNEALKHTHT GGTLDLLVSF FPMPLDGSAF

Best Arabidopsis Sequence Match ( AT2G34840.1 )
(BLAST)

001: MSAMGAGPDH LFNLRNNFYL GAYQTAINNS EIANLSPENA VERDCLVFRS YIALGSYQLV ISEIDESAAT PLQAVKLLAM YLSTPQNKES TISSLKEWLA
101: DSTIGNNDTL RLIAGIIFMH EEDYNETLKH THAGGTMDLY ALNVQIFIKM HRAEYAEKQL RVMQQIDEDH TLTQLASAWL NLAVGGSKIQ EAYLIFEDFS
201: EKYPMTCLIL NGKAVCCMQM GNFDEAETLL LEALNKDAKD PETLANLVVC SLHVGKSSSR HLSQLKLSHP EHILVKRVSS AEDNFERAVQ LVA

Arabidopsis Description

Coatomer subunit epsilon-2 [Source:UniProtKB/Swiss-Prot;Acc:O64748]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.