Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79587 | Canola | cytosol | 90.44 | 90.44 |
| Bra022994.1-P | Field mustard | cytosol | 90.1 | 90.1 |
| CDX84626 | Canola | cytosol | 90.1 | 90.1 |
| CDY67686 | Canola | cytosol | 90.1 | 90.1 |
| Bra021935.1-P | Field mustard | cytosol | 89.42 | 89.42 |
| CDY70767 | Canola | cytosol | 63.48 | 86.92 |
| AT1G30630.1 | Thale cress | cytosol | 86.35 | 86.64 |
| VIT_10s0003g05630.t01 | Wine grape | extracellular | 79.52 | 80.62 |
| PGSC0003DMT400080641 | Potato | cytosol | 77.47 | 78.01 |
| Solyc02g030250.2.1 | Tomato | cytosol | 77.47 | 78.01 |
| Os04t0612600-02 | Rice | cytosol | 76.11 | 77.7 |
| PGSC0003DMT400054458 | Potato | cytosol | 77.13 | 77.66 |
| EES12840 | Sorghum | cytosol | 75.09 | 76.66 |
| TraesCS2A01G424700.2 | Wheat | golgi | 74.74 | 76.31 |
| GSMUA_Achr2P03150_001 | Banana | cytosol | 75.43 | 76.21 |
| TraesCS2B01G444400.2 | Wheat | extracellular | 74.4 | 75.96 |
| TraesCS2D01G422600.1 | Wheat | cytosol | 74.06 | 75.61 |
| KRH11873 | Soybean | endoplasmic reticulum | 74.06 | 74.83 |
| GSMUA_Achr7P16810_001 | Banana | cytosol | 72.7 | 73.96 |
| KRH36897 | Soybean | endoplasmic reticulum | 73.04 | 73.79 |
| Solyc02g069590.2.1 | Tomato | nucleus | 67.92 | 70.82 |
| Zm00001d042031_P001 | Maize | cytosol | 20.48 | 70.59 |
| Zm00001d026283_P001 | Maize | extracellular | 74.06 | 69.33 |
| HORVU2Hr1G099380.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 23.55 | 69.0 |
| HORVU2Hr1G099460.4 | Barley | cytosol, plastid | 66.89 | 67.35 |
| Zm00001d036659_P001 | Maize | cytosol | 32.76 | 66.67 |
| Zm00001d050474_P001 | Maize | cytosol | 16.72 | 66.22 |
| Os04t0644700-00 | Rice | plasma membrane | 66.21 | 65.32 |
| Zm00001d026438_P002 | Maize | plastid | 65.19 | 64.97 |
| OQU82434 | Sorghum | plastid | 65.19 | 64.53 |
| Zm00001d016183_P001 | Maize | cytosol | 38.57 | 42.48 |
| Zm00001d041399_P001 | Maize | cytosol | 23.21 | 41.98 |
| Zm00001d000079_P001 | Maize | cytosol | 17.41 | 33.55 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:22.3.1.3 | EntrezGene:818049 | ProteinID:AAC12824.1 | ProteinID:AEC09028.1 | ArrayExpress:AT2G34840 |
| EnsemblPlantsGene:AT2G34840 | RefSeq:AT2G34840 | TAIR:AT2G34840 | RefSeq:AT2G34840-TAIR-G | EnsemblPlants:AT2G34840.1 | TAIR:AT2G34840.1 |
| EMBL:AY075627 | EMBL:AY142051 | Unigene:At.37752 | InterPro:Coatomer_esu | GO:GO:0000139 | GO:GO:0003674 |
| GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005829 | GO:GO:0006810 | GO:GO:0006888 | GO:GO:0006890 |
| GO:GO:0006891 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030126 |
| GO:GO:0030663 | GO:GO:0031410 | InterPro:IPR011990 | RefSeq:NP_181030.1 | UniProt:O64748 | PFAM:PF04733 |
| PIRSF:PIRSF016478 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR10805 | PANTHER:PTHR10805:SF1 | SUPFAM:SSF48452 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI000000112F |
Description
Coatomer subunit epsilon-2 [Source:UniProtKB/Swiss-Prot;Acc:O64748]
Coordinates
chr2:+:14702488..14704371
Molecular Weight (calculated)
32660.1 Da
IEP (calculated)
4.923
GRAVY (calculated)
-0.108
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAMGAGPDH LFNLRNNFYL GAYQTAINNS EIANLSPENA VERDCLVFRS YIALGSYQLV ISEIDESAAT PLQAVKLLAM YLSTPQNKES TISSLKEWLA
101: DSTIGNNDTL RLIAGIIFMH EEDYNETLKH THAGGTMDLY ALNVQIFIKM HRAEYAEKQL RVMQQIDEDH TLTQLASAWL NLAVGGSKIQ EAYLIFEDFS
201: EKYPMTCLIL NGKAVCCMQM GNFDEAETLL LEALNKDAKD PETLANLVVC SLHVGKSSSR HLSQLKLSHP EHILVKRVSS AEDNFERAVQ LVA
101: DSTIGNNDTL RLIAGIIFMH EEDYNETLKH THAGGTMDLY ALNVQIFIKM HRAEYAEKQL RVMQQIDEDH TLTQLASAWL NLAVGGSKIQ EAYLIFEDFS
201: EKYPMTCLIL NGKAVCCMQM GNFDEAETLL LEALNKDAKD PETLANLVVC SLHVGKSSSR HLSQLKLSHP EHILVKRVSS AEDNFERAVQ LVA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.