Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2B01G444400.2 | Wheat | extracellular | 99.65 | 99.65 |
TraesCS2A01G424700.2 | Wheat | golgi | 99.3 | 99.3 |
EES12840 | Sorghum | cytosol | 93.73 | 93.73 |
Os04t0612600-02 | Rice | cytosol | 93.38 | 93.38 |
HORVU2Hr1G099460.4 | Barley | cytosol, plastid | 88.85 | 87.63 |
Zm00001d026283_P001 | Maize | extracellular | 93.03 | 85.3 |
GSMUA_Achr2P03150_001 | Banana | cytosol | 80.84 | 80.0 |
VIT_10s0003g05630.t01 | Wine grape | extracellular | 78.05 | 77.51 |
GSMUA_Achr7P16810_001 | Banana | cytosol | 75.96 | 75.69 |
Bra021935.1-P | Field mustard | cytosol | 76.66 | 75.09 |
CDX79587 | Canola | cytosol | 76.66 | 75.09 |
Solyc02g030250.2.1 | Tomato | cytosol | 75.96 | 74.91 |
PGSC0003DMT400080641 | Potato | cytosol | 75.96 | 74.91 |
CDY67686 | Canola | cytosol | 76.31 | 74.74 |
Bra022994.1-P | Field mustard | cytosol | 76.31 | 74.74 |
CDX84626 | Canola | cytosol | 75.96 | 74.4 |
AT1G30630.1 | Thale cress | cytosol | 75.61 | 74.32 |
AT2G34840.1 | Thale cress | cytosol | 75.61 | 74.06 |
PGSC0003DMT400054458 | Potato | cytosol | 74.91 | 73.88 |
CDY70767 | Canola | cytosol | 55.05 | 73.83 |
Bra032410.1-P | Field mustard | cytosol | 74.91 | 73.38 |
CDY02313 | Canola | cytosol | 74.91 | 73.38 |
CDY09554 | Canola | cytosol | 74.91 | 73.38 |
KRH11873 | Soybean | endoplasmic reticulum | 71.08 | 70.34 |
KRH36897 | Soybean | endoplasmic reticulum | 70.38 | 69.66 |
Solyc02g069590.2.1 | Tomato | nucleus | 62.72 | 64.06 |
Protein Annotations
EnsemblPlants:TraesCS2D01G422600.1 | EnsemblPlantsGene:TraesCS2D01G422600 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005198 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0006810 | GO:GO:0006890 | GO:GO:0008150 | InterPro:Coatomer_esu | InterPro:IPR011990 |
InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR10805 | PANTHER:PTHR10805:SF1 | PFAM:PF04733 | PIRSF:PIRSF016478 | SEG:seg |
SUPFAM:SSF48452 | MapMan:22.3.1.3 | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:535745988..535749652
Molecular Weight (calculated)
31592.8 Da
IEP (calculated)
5.137
GRAVY (calculated)
-0.009
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MATPDLLFNL RNLFYLGAYQ SAINNSDVPG LDADAAAERD VIVFRSYIAL GSYQLVISEI DSSAATSLQA VKLLALYLTG DKEGAIASLK EWLSDSAIGS
101: NPVLRLIAGI IFMHEQDYNE ALKHTHTGGT LDLHALNVQI FLKMHRSDYA DKQLKIMQQT DEDHTLTQLA NAWLDIAVGG SKIREAYLIF QDFAEKYPMT
201: GMVLNGKAVC CMHMGSFEEA ETLLLEALNK DAKDPETLAN LIVCNLHLGK PSSRYFSQLK LSHPDHVLVK TTTSAEGNFE RALQAVA
101: NPVLRLIAGI IFMHEQDYNE ALKHTHTGGT LDLHALNVQI FLKMHRSDYA DKQLKIMQQT DEDHTLTQLA NAWLDIAVGG SKIREAYLIF QDFAEKYPMT
201: GMVLNGKAVC CMHMGSFEEA ETLLLEALNK DAKDPETLAN LIVCNLHLGK PSSRYFSQLK LSHPDHVLVK TTTSAEGNFE RALQAVA
001: MASMAGPDHL FNLRNHFYLG AYQAAINNSE IPNLSQEDIV ERDCLVHRAY IALGSYQLVI SEIDEAAATP LQAVKLLAMY LSSPENKEST ISSLREWLAD
101: PTVGNNAIIR LIAGTIFMHE EDYNEALKHT HSGGTMDLHA LNVQIFIKMH RSDFAEKQLR VMQQIDEDHT LTQLASAWLN LAVGGSKIQE AYLIFQDFSE
201: KYPMTSLILN GKAVCCMHMG NFEEAETLLL EALNKDAKDP ETLANLVVCS LHVGKSSSRY LNQLKLSHPE HVLVKRAASA EDNFERALQS FA
101: PTVGNNAIIR LIAGTIFMHE EDYNEALKHT HSGGTMDLHA LNVQIFIKMH RSDFAEKQLR VMQQIDEDHT LTQLASAWLN LAVGGSKIQE AYLIFQDFSE
201: KYPMTSLILN GKAVCCMHMG NFEEAETLLL EALNKDAKDP ETLANLVVCS LHVGKSSSRY LNQLKLSHPE HVLVKRAASA EDNFERALQS FA
Arabidopsis Description
Coatomer subunit epsilon-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA78]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.