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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid, secretory
MultiLoc:cytosol
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G444400.2 Wheat extracellular 99.65 99.65
TraesCS2A01G424700.2 Wheat golgi 99.3 99.3
EES12840 Sorghum cytosol 93.73 93.73
Os04t0612600-02 Rice cytosol 93.38 93.38
HORVU2Hr1G099460.4 Barley cytosol, plastid 88.85 87.63
Zm00001d026283_P001 Maize extracellular 93.03 85.3
GSMUA_Achr2P03150_001 Banana cytosol 80.84 80.0
VIT_10s0003g05630.t01 Wine grape extracellular 78.05 77.51
GSMUA_Achr7P16810_001 Banana cytosol 75.96 75.69
Bra021935.1-P Field mustard cytosol 76.66 75.09
CDX79587 Canola cytosol 76.66 75.09
Solyc02g030250.2.1 Tomato cytosol 75.96 74.91
PGSC0003DMT400080641 Potato cytosol 75.96 74.91
CDY67686 Canola cytosol 76.31 74.74
Bra022994.1-P Field mustard cytosol 76.31 74.74
CDX84626 Canola cytosol 75.96 74.4
AT1G30630.1 Thale cress cytosol 75.61 74.32
AT2G34840.1 Thale cress cytosol 75.61 74.06
PGSC0003DMT400054458 Potato cytosol 74.91 73.88
CDY70767 Canola cytosol 55.05 73.83
Bra032410.1-P Field mustard cytosol 74.91 73.38
CDY02313 Canola cytosol 74.91 73.38
CDY09554 Canola cytosol 74.91 73.38
KRH11873 Soybean endoplasmic reticulum 71.08 70.34
KRH36897 Soybean endoplasmic reticulum 70.38 69.66
Solyc02g069590.2.1 Tomato nucleus 62.72 64.06
Protein Annotations
EnsemblPlants:TraesCS2D01G422600.1EnsemblPlantsGene:TraesCS2D01G422600Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005198GO:GO:0005488
GO:GO:0005515GO:GO:0006810GO:GO:0006890GO:GO:0008150InterPro:Coatomer_esuInterPro:IPR011990
InterPro:TPR-like_helical_dom_sfPANTHER:PTHR10805PANTHER:PTHR10805:SF1PFAM:PF04733PIRSF:PIRSF016478SEG:seg
SUPFAM:SSF48452MapMan:22.3.1.3::::
Description
No Description!
Coordinates
chr2D:+:535745988..535749652
Molecular Weight (calculated)
31592.8 Da
IEP (calculated)
5.137
GRAVY (calculated)
-0.009
Length
287 amino acids
Sequence
(BLAST)
001: MATPDLLFNL RNLFYLGAYQ SAINNSDVPG LDADAAAERD VIVFRSYIAL GSYQLVISEI DSSAATSLQA VKLLALYLTG DKEGAIASLK EWLSDSAIGS
101: NPVLRLIAGI IFMHEQDYNE ALKHTHTGGT LDLHALNVQI FLKMHRSDYA DKQLKIMQQT DEDHTLTQLA NAWLDIAVGG SKIREAYLIF QDFAEKYPMT
201: GMVLNGKAVC CMHMGSFEEA ETLLLEALNK DAKDPETLAN LIVCNLHLGK PSSRYFSQLK LSHPDHVLVK TTTSAEGNFE RALQAVA
Best Arabidopsis Sequence Match ( AT1G30630.1 )
(BLAST)
001: MASMAGPDHL FNLRNHFYLG AYQAAINNSE IPNLSQEDIV ERDCLVHRAY IALGSYQLVI SEIDEAAATP LQAVKLLAMY LSSPENKEST ISSLREWLAD
101: PTVGNNAIIR LIAGTIFMHE EDYNEALKHT HSGGTMDLHA LNVQIFIKMH RSDFAEKQLR VMQQIDEDHT LTQLASAWLN LAVGGSKIQE AYLIFQDFSE
201: KYPMTSLILN GKAVCCMHMG NFEEAETLLL EALNKDAKDP ETLANLVVCS LHVGKSSSRY LNQLKLSHPE HVLVKRAASA EDNFERALQS FA
Arabidopsis Description
Coatomer subunit epsilon-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA78]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.