Factsheet for HORVU2Hr1G099460.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G444400.2	Wheat	extracellular	87.97	89.2
TraesCS2A01G424700.2	Wheat	golgi	87.97	89.2
TraesCS2D01G422600.1	Wheat	cytosol	87.63	88.85
EES12840	Sorghum	cytosol	84.19	85.37
HORVU2Hr1G099380.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	29.21	85.0
Zm00001d026283_P001	Maize	extracellular	83.85	77.96
GSMUA_Achr2P03150_001	Banana	cytosol	73.2	73.45
VIT_10s0003g05630.t01	Wine grape	extracellular	70.79	71.28
GSMUA_Achr7P16810_001	Banana	cytosol	68.73	69.44
Solyc02g030250.2.1	Tomato	cytosol	69.07	69.07
PGSC0003DMT400080641	Potato	cytosol	68.73	68.73
PGSC0003DMT400054458	Potato	cytosol	67.7	67.7
Bra021935.1-P	Field mustard	cytosol	68.04	67.58
CDX79587	Canola	cytosol	68.04	67.58
CDY67686	Canola	cytosol	67.7	67.24
Bra022994.1-P	Field mustard	cytosol	67.7	67.24
AT1G30630.1	Thale cress	cytosol	67.35	67.12
AT2G34840.1	Thale cress	cytosol	67.35	66.89
CDX84626	Canola	cytosol	67.35	66.89
Bra032410.1-P	Field mustard	cytosol	65.64	65.19
CDY02313	Canola	cytosol	65.64	65.19
CDY09554	Canola	cytosol	65.64	65.19
CDY70767	Canola	cytosol	47.08	64.02
KRH11873	Soybean	endoplasmic reticulum	62.89	63.1
KRH36897	Soybean	endoplasmic reticulum	62.54	62.76
Solyc02g069590.2.1	Tomato	nucleus	56.01	58.01

Protein Annotations

Gene3D:1.25.40.10	MapMan:22.3.1.3	UniProt:A0A287J568	InterPro:Coatomer_esu	GO:GO:0000139	GO:GO:0003674
GO:GO:0005198	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0006890	GO:GO:0008150	GO:GO:0015031
GO:GO:0016020	GO:GO:0016192	GO:GO:0031410	EnsemblPlantsGene:HORVU2Hr1G099460	EnsemblPlants:HORVU2Hr1G099460.4	InterPro:IPR011990
PFAM:PF04733	PIRSF:PIRSF016478	PANTHER:PTHR10805	PANTHER:PTHR10805:SF1	SUPFAM:SSF48452	InterPro:TPR-like_helical_dom_sf
UniParc:UPI000B46FD90	SEG:seg	:	:	:	:

Description

Coatomer subunit epsilon [Source:UniProtKB/TrEMBL;Acc:A0A287J568]

Coordinates

chrchr2H:-:687685822..687689267

Molecular Weight (calculated)

31922.2 Da

IEP (calculated)

5.552

GRAVY (calculated)

-0.081

Length

291 amino acids

Sequence
(BLAST)

001: RTQATHSSFS RSPTPPPRVA VEPTPSPAAP PLPAMATPDL LFNLRNLFYL GAYQSAINNS DVPGLDADAA AERDVIVFRS YIALGSYQLV ISEIDSSAAT
101: SLQAVKLLAL YLTGDKEGAI SSLKEWLSDS AIGSNPVLRL IAGIIFMHEQ DYNEALKHTH TGGTLDLHAL NVQIFLKMHR SDYADKQLKI MQQTDEDHTL
201: TQLANAWLDI AVGGSKIREA YLIFQDFAEK YPMTGMVLNG KAVCCMHMGS FEEAETLLLE ALNKDAKDPE TLANLIVCNL HLGKPSSRYF R

Best Arabidopsis Sequence Match ( AT1G30630.1 )
(BLAST)

001: MASMAGPDHL FNLRNHFYLG AYQAAINNSE IPNLSQEDIV ERDCLVHRAY IALGSYQLVI SEIDEAAATP LQAVKLLAMY LSSPENKEST ISSLREWLAD
101: PTVGNNAIIR LIAGTIFMHE EDYNEALKHT HSGGTMDLHA LNVQIFIKMH RSDFAEKQLR VMQQIDEDHT LTQLASAWLN LAVGGSKIQE AYLIFQDFSE
201: KYPMTSLILN GKAVCCMHMG NFEEAETLLL EALNKDAKDP ETLANLVVCS LHVGKSSSRY LNQLKLSHPE HVLVKRAASA EDNFERALQS FA

Arabidopsis Description

Coatomer subunit epsilon-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.