Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G154600.2 | Wheat | nucleus | 92.7 | 98.07 |
| TraesCS4A01G160700.1 | Wheat | nucleus | 92.21 | 97.54 |
| TraesCS4B01G157400.1 | Wheat | nucleus | 92.37 | 97.38 |
| EER94734 | Sorghum | nucleus | 84.74 | 89.34 |
| Os03t0397500-01 | Rice | nucleus | 84.74 | 89.18 |
| Zm00001d047245_P001 | Maize | extracellular, plasma membrane | 84.08 | 88.64 |
| Zm00001d029435_P001 | Maize | nucleus | 83.91 | 88.62 |
| CDY55054 | Canola | cytosol | 18.74 | 85.61 |
| CDX93405 | Canola | cytosol | 18.74 | 72.44 |
| Solyc02g078970.2.1 | Tomato | nucleus | 66.83 | 70.7 |
| VIT_01s0026g00040.t01 | Wine grape | nucleus | 67.99 | 70.21 |
| Bra019919.1-P | Field mustard | nucleus | 65.67 | 70.09 |
| GSMUA_Achr1P14840_001 | Banana | nucleus | 67.66 | 69.98 |
| AT1G10580.1 | Thale cress | nucleus | 66.5 | 69.98 |
| KRH34573 | Soybean | nucleus | 66.83 | 69.48 |
| PGSC0003DMT400057595 | Potato | nucleus | 66.83 | 69.48 |
| KRG92226 | Soybean | nucleus | 66.0 | 69.22 |
| GSMUA_Achr3P00660_001 | Banana | nucleus | 66.83 | 68.65 |
| PGSC0003DMT400078422 | Potato | cytosol | 31.68 | 65.41 |
| HORVU2Hr1G011560.1 | Barley | plastid | 14.1 | 24.5 |
Protein Annotations
| MapMan:16.4.5.2.11 | Gene3D:2.130.10.10 | UniProt:A0A287NUM2 | InterPro:G-protein_beta_WD-40_rep | GO:GO:0000398 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0071013 | EnsemblPlantsGene:HORVU4Hr1G039720 |
| EnsemblPlants:HORVU4Hr1G039720.1 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | PFAM:PF00400 | PRINTS:PR00320 |
| InterPro:PRPF17 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR43979 | SMART:SM00320 |
| SUPFAM:SSF50978 | UniParc:UPI000B47076F | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom |
| InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:+:304694447..304706541
Molecular Weight (calculated)
64582.6 Da
IEP (calculated)
7.159
GRAVY (calculated)
-0.623
Length
603 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXXXXXXXX XXXXXXXXXX XXXXXXXPAR PPAMDLLQSS YAPGDASSPE DESLSSTDTS PLRLPTKSAA PAVDETALAL SAAAASTSRP LDPSLHRIPF
101: NPTAEQLWAP VLGPQHPHAP ISSASGHRNH KLGHVEDAAL LPFLFDEQYN TFHRFGYASD PSGLHIIGDA QSQAPDPDTV YNLPPSEHKR RRIQSREENH
201: EPVPQEAQNP ASDEWVVHNK QSPWAGNREG PPVELTDEQR QYAEAHAAKK AEKEARGEGK EKTEVVVKST FHGKEEKDYQ GRSWTTPPKD AKTTNERCYI
301: PKRCVHEWIG HTKGVSAIRF SPKYGHLLLS ASMDCKIKIW DVLESKTCMR TYMGHSKAVR DISFSNDGSK FLSAGYDRNI QYWDTETGQV ISTFSTGKVP
401: YVVKLNPDED KQHILLAGMS DKKIVQWDMK SGQITQEYDQ HLGAVNTITF VDNNRRFVTS SDDKSLRVWE FGIPVVIKYI SEPHMHSMPS IAVHPNSNWL
501: AAQSLDNQIL IYSTKERFQL NKKKRFAGHI VAGYACQVSF SPDGRFVMSG DGEGSCWFWD WKSCRRFKTL KCHNGVCIGC EWHPLETSKV ATCGWDGVIK
601: YWD
101: NPTAEQLWAP VLGPQHPHAP ISSASGHRNH KLGHVEDAAL LPFLFDEQYN TFHRFGYASD PSGLHIIGDA QSQAPDPDTV YNLPPSEHKR RRIQSREENH
201: EPVPQEAQNP ASDEWVVHNK QSPWAGNREG PPVELTDEQR QYAEAHAAKK AEKEARGEGK EKTEVVVKST FHGKEEKDYQ GRSWTTPPKD AKTTNERCYI
301: PKRCVHEWIG HTKGVSAIRF SPKYGHLLLS ASMDCKIKIW DVLESKTCMR TYMGHSKAVR DISFSNDGSK FLSAGYDRNI QYWDTETGQV ISTFSTGKVP
401: YVVKLNPDED KQHILLAGMS DKKIVQWDMK SGQITQEYDQ HLGAVNTITF VDNNRRFVTS SDDKSLRVWE FGIPVVIKYI SEPHMHSMPS IAVHPNSNWL
501: AAQSLDNQIL IYSTKERFQL NKKKRFAGHI VAGYACQVSF SPDGRFVMSG DGEGSCWFWD WKSCRRFKTL KCHNGVCIGC EWHPLETSKV ATCGWDGVIK
601: YWD
001: MDLIQSYEEE DEAVASSPES SPPRMLKAKS SAPEVDDTAL ALTVANVNQS KSKPIDPTQH VVFYNPTHDQ LWAPMFGPAH PYAKDGIAQG MRNHKLGSVE
101: DASIGSFGFE EQYHTFHKCG YAADPSGMNY VGDVEAFKKN DGLSVFNIPQ SEQKRRKIER SKEEREGEEK KEEIEPEAEN PETEAWLRKN RKSPWSRKKE
201: VVQGELTEEQ KKYAEDHAKK KEEKGQQGET KGEHYADKST FHGKEEKDYQ GRSWIEAPKD AKANNDHCYI PKRLVHTWSG HTKGVSAIRF FPKQGHLLLS
301: AGMDCKVKIW DVYNSGKCMR TYMGHAKAVR DICFSNDGSK FLTAGYDKNI KYWDTETGQV ISTFSTGKIP YVVKLNPDDD KQNILLAGMS DKKIVQWDIN
401: TGEVTQEYDQ HLGAVNTITF VDNNRRFVTS SDDKSLRVWE FGIPVVIKYI SEPHMHSMPS ISVHPNGNWL AAQSLDNQIL IYSTRERFQL NKKKRFAGHI
501: VAGYACQVNF SPDGRFVMSG DGEGKCWFWD WKSCKVFRTL KCHNGVCIGA EWHPLEQSKV ATCGWDGLIK YWD
101: DASIGSFGFE EQYHTFHKCG YAADPSGMNY VGDVEAFKKN DGLSVFNIPQ SEQKRRKIER SKEEREGEEK KEEIEPEAEN PETEAWLRKN RKSPWSRKKE
201: VVQGELTEEQ KKYAEDHAKK KEEKGQQGET KGEHYADKST FHGKEEKDYQ GRSWIEAPKD AKANNDHCYI PKRLVHTWSG HTKGVSAIRF FPKQGHLLLS
301: AGMDCKVKIW DVYNSGKCMR TYMGHAKAVR DICFSNDGSK FLTAGYDKNI KYWDTETGQV ISTFSTGKIP YVVKLNPDDD KQNILLAGMS DKKIVQWDIN
401: TGEVTQEYDQ HLGAVNTITF VDNNRRFVTS SDDKSLRVWE FGIPVVIKYI SEPHMHSMPS ISVHPNGNWL AAQSLDNQIL IYSTRERFQL NKKKRFAGHI
501: VAGYACQVNF SPDGRFVMSG DGEGKCWFWD WKSCKVFRTL KCHNGVCIGA EWHPLEQSKV ATCGWDGLIK YWD
Arabidopsis Description
At1g10580 [Source:UniProtKB/TrEMBL;Acc:A4FVN8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.