Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G505900.1 | Wheat | cytosol | 58.59 | 84.2 |
| TraesCS4A01G176500.1 | Wheat | cytosol | 68.56 | 80.12 |
| TraesCS4B01G141200.1 | Wheat | cytosol | 77.49 | 79.54 |
| TraesCS4D01G136100.1 | Wheat | cytosol | 78.35 | 78.08 |
| OQU84114 | Sorghum | mitochondrion | 38.83 | 47.18 |
| HORVU4Hr1G027520.2 | Barley | cytosol, peroxisome | 44.5 | 39.66 |
| HORVU4Hr1G027900.1 | Barley | cytosol | 44.5 | 39.12 |
| HORVU4Hr1G027610.1 | Barley | cytosol | 45.36 | 39.0 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 28.69 | 37.19 |
| HORVU5Hr1G020900.1 | Barley | cytosol | 45.53 | 35.57 |
| HORVU3Hr1G012520.1 | Barley | cytosol | 27.32 | 34.87 |
| HORVU4Hr1G027480.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 42.27 | 34.79 |
| HORVU4Hr1G027920.1 | Barley | peroxisome | 45.36 | 33.29 |
| HORVU5Hr1G113620.1 | Barley | cytosol, nucleus, peroxisome | 35.22 | 31.83 |
| HORVU5Hr1G045020.29 | Barley | cytosol | 38.66 | 28.59 |
| HORVU3Hr1G012550.6 | Barley | cytosol | 29.21 | 28.52 |
| HORVU3Hr1G086210.1 | Barley | cytosol, nucleus, plasma membrane | 38.66 | 28.45 |
| HORVU1Hr1G004440.1 | Barley | cytosol | 33.33 | 26.98 |
| HORVU4Hr1G071670.1 | Barley | cytosol | 20.96 | 22.76 |
| HORVU2Hr1G036280.1 | Barley | cytosol | 21.65 | 22.62 |
| HORVU3Hr1G091250.1 | Barley | cytosol | 19.93 | 21.01 |
| HORVU2Hr1G043780.1 | Barley | cytosol | 20.45 | 20.88 |
| HORVU5Hr1G099160.1 | Barley | plastid | 21.13 | 19.52 |
| HORVU2Hr1G094040.2 | Barley | cytosol, plastid | 10.65 | 16.1 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G080460.5 | EnsemblPlantsGene:HORVU4Hr1G080460 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 |
| PANTHER:PTHR31636:SF41 | PFAM:PF03514 | PFscan:PS50985 | SEG:seg | UniParc:UPI000B473F76 | UniProt:A0A287PTZ3 |
| MapMan:15.5.12 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:615736049..615737871
Molecular Weight (calculated)
64759.4 Da
IEP (calculated)
5.614
GRAVY (calculated)
-0.315
Length
582 amino acids
Sequence
(BLAST)
(BLAST)
001: IHSSKSFAIA ITIAAAPAHD DSNRFPVQDH LALPYIAQIL MEEEEDDDVD QDNPALLKAQ RPFAQILSSS THASKGSALA SDVHSPSPAT FKFKGVDEVR
101: SLLLLANGED NTHIFSTAFL KGMEEAKKFL PTNCELTTTG AQDQPKEKSG SGREDRSDEV EADASRTNGS VGARACEVFD FDQMCSSMDN ETGSSSKKGR
201: KSKARVIDLH TLLIHCARAT TDDRRRAGEL LMEIQLHASP AGDGTQRLAY WFAEGLEARL AGTGSQVYGT ITAKATSAVV HSEAYQAFIS TCCFRNVSIL
301: FANRAILNAA AGRSRLHIVD YGFCYGFQWS ELLRSLAARD GGSPEVRITH IDLPQPGLHP GRHMEEVGGR LTDIARELGV PFKYRAILAQ WQTVCAEDLD
401: LEEDEVLAVN DLYNFRTLMD ECVVVGSPNP RDVVLSNVCR MKPDVFVQST VNGSYGTFFL SRFRGALFFY SAMFDMLDAT MPRESELRLA LERGVFGWVA
501: LNAVAYEGED RVERGETFRH WQVRNQRAGL RQLPLDKETV KMARDMVKNE YHKDFVIDED QQWVAYCVKV NNSYWVSHIR VT
101: SLLLLANGED NTHIFSTAFL KGMEEAKKFL PTNCELTTTG AQDQPKEKSG SGREDRSDEV EADASRTNGS VGARACEVFD FDQMCSSMDN ETGSSSKKGR
201: KSKARVIDLH TLLIHCARAT TDDRRRAGEL LMEIQLHASP AGDGTQRLAY WFAEGLEARL AGTGSQVYGT ITAKATSAVV HSEAYQAFIS TCCFRNVSIL
301: FANRAILNAA AGRSRLHIVD YGFCYGFQWS ELLRSLAARD GGSPEVRITH IDLPQPGLHP GRHMEEVGGR LTDIARELGV PFKYRAILAQ WQTVCAEDLD
401: LEEDEVLAVN DLYNFRTLMD ECVVVGSPNP RDVVLSNVCR MKPDVFVQST VNGSYGTFFL SRFRGALFFY SAMFDMLDAT MPRESELRLA LERGVFGWVA
501: LNAVAYEGED RVERGETFRH WQVRNQRAGL RQLPLDKETV KMARDMVKNE YHKDFVIDED QQWVAYCVKV NNSYWVSHIR VT
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.