Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G141400.1 | Wheat | cytosol | 91.84 | 91.98 |
| TraesCS4A01G176300.1 | Wheat | cytosol | 92.3 | 90.52 |
| TraesCS4D01G136400.1 | Wheat | mitochondrion | 92.6 | 86.1 |
| HORVU4Hr1G027610.1 | Barley | cytosol | 81.12 | 79.32 |
| Os11t0705900-01 | Rice | cytosol | 57.55 | 59.35 |
| OQU84113 | Sorghum | cytosol, nucleus, plastid | 55.59 | 57.59 |
| Zm00001d048601_P001 | Maize | cytosol | 54.98 | 56.7 |
| HORVU4Hr1G027520.2 | Barley | cytosol, peroxisome | 49.85 | 50.54 |
| HORVU4Hr1G027920.1 | Barley | peroxisome | 56.95 | 47.54 |
| HORVU4Hr1G027480.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 48.34 | 45.26 |
| HORVU5Hr1G020900.1 | Barley | cytosol | 50.15 | 44.56 |
| HORVU4Hr1G080460.5 | Barley | cytosol | 39.12 | 44.5 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 29.0 | 42.76 |
| HORVU3Hr1G012520.1 | Barley | cytosol | 27.79 | 40.35 |
| HORVU5Hr1G113620.1 | Barley | cytosol, nucleus, peroxisome | 36.56 | 37.58 |
| HORVU5Hr1G045020.29 | Barley | cytosol | 39.88 | 33.55 |
| HORVU3Hr1G086210.1 | Barley | cytosol, nucleus, plasma membrane | 40.03 | 33.5 |
| HORVU3Hr1G012550.6 | Barley | cytosol | 29.61 | 32.89 |
| HORVU1Hr1G004440.1 | Barley | cytosol | 32.78 | 30.18 |
| HORVU2Hr1G036280.1 | Barley | cytosol | 22.05 | 26.21 |
| HORVU3Hr1G091250.1 | Barley | cytosol | 19.79 | 23.73 |
| HORVU4Hr1G071670.1 | Barley | cytosol | 18.88 | 23.32 |
| HORVU2Hr1G043780.1 | Barley | cytosol | 19.79 | 22.98 |
| HORVU5Hr1G099160.1 | Barley | plastid | 20.69 | 21.75 |
| HORVU2Hr1G094040.2 | Barley | cytosol, plastid | 10.42 | 17.92 |
Protein Annotations
| MapMan:15.5.12 | EMBL:AK367226 | UniProt:F2DTK8 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU4Hr1G027900 | EnsemblPlants:HORVU4Hr1G027900.1 |
| InterPro:IPR005202 | PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF20 | InterPro:TF_GRAS |
| UniParc:UPI0002006FD1 | SEG:seg | : | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DTK8]
Coordinates
chrchr4H:-:171833857..171837800
Molecular Weight (calculated)
73552.5 Da
IEP (calculated)
6.476
GRAVY (calculated)
-0.424
Length
662 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATPEEFLA QQAFLARLEP PSPSLFLDLP PTPRGGGDDD DGHSSFDDMV LPYISHLLME EGTEEEDHLF YLYPNHPAVL RAQQPFAQIL VDVADSASGS
101: TSITSPSSSS DATASTAPST ATASPHDALV QISPPPCTDA NGHASASPDN HGDEMAKRPS SDFFNHLLPG DPDMLNLAFL KGMEDARKFL PPDTSLPPIK
201: EGTVVGGGNA GRFKKKRDAP APEPDEGRPS KLMMPEQEER KMFDEMMFRE HEICMKGTQN LTDGEPGKKG RSRKAVNDSE MVDLHTLLLN CAQALSTDNR
301: QSAIELLKGI RQHSTPKGDA GQRLAHYFAN GLEARLAGRG SELYQSLLLS RISVADFLKA NQLYMAACCC KKVAFIFADK TICNAVAGKT RLHIVDYGLN
401: QGLQWPGLLR MLAAREGGPP EVRITGIDLP QPGFHGAYHI EETGRRLSNF ARVFGVPFKF RGIPAKRETV RPEDLNIDPD EVLVVISLCH FRHLMDESLG
501: FDGPSPRDQV LNNIRKMRPH VFIHGIMNGS YGATSFLTRF REALFHYSAQ FDLLDTTVPR DNEGRLLLER DIFGRSCLNV LACEGADRVE RPETYKQWQL
601: RNHRAGLRQL PLNPDVVKLV LDKVKDNYHR NFVVDADQRW LLHRWKGRVL YAWSSWIAAD AT
101: TSITSPSSSS DATASTAPST ATASPHDALV QISPPPCTDA NGHASASPDN HGDEMAKRPS SDFFNHLLPG DPDMLNLAFL KGMEDARKFL PPDTSLPPIK
201: EGTVVGGGNA GRFKKKRDAP APEPDEGRPS KLMMPEQEER KMFDEMMFRE HEICMKGTQN LTDGEPGKKG RSRKAVNDSE MVDLHTLLLN CAQALSTDNR
301: QSAIELLKGI RQHSTPKGDA GQRLAHYFAN GLEARLAGRG SELYQSLLLS RISVADFLKA NQLYMAACCC KKVAFIFADK TICNAVAGKT RLHIVDYGLN
401: QGLQWPGLLR MLAAREGGPP EVRITGIDLP QPGFHGAYHI EETGRRLSNF ARVFGVPFKF RGIPAKRETV RPEDLNIDPD EVLVVISLCH FRHLMDESLG
501: FDGPSPRDQV LNNIRKMRPH VFIHGIMNGS YGATSFLTRF REALFHYSAQ FDLLDTTVPR DNEGRLLLER DIFGRSCLNV LACEGADRVE RPETYKQWQL
601: RNHRAGLRQL PLNPDVVKLV LDKVKDNYHR NFVVDADQRW LLHRWKGRVL YAWSSWIAAD AT
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.