Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G176300.1 | Wheat | cytosol | 94.4 | 92.44 |
| HORVU4Hr1G027900.1 | Barley | cytosol | 91.98 | 91.84 |
| TraesCS4D01G136400.1 | Wheat | mitochondrion | 95.16 | 88.34 |
| TraesCS4B01G141300.1 | Wheat | cytosol | 82.3 | 80.71 |
| Os11t0705900-01 | Rice | cytosol | 58.7 | 60.44 |
| OQU84113 | Sorghum | cytosol, nucleus, plastid | 55.52 | 57.43 |
| Zm00001d048601_P001 | Maize | cytosol | 55.67 | 57.32 |
| TraesCS4B01G141100.1 | Wheat | cytosol | 49.92 | 52.46 |
| TraesCS7B01G077800.1 | Wheat | cytosol | 54.61 | 49.12 |
| TraesCS4B01G141200.1 | Wheat | cytosol | 41.6 | 48.5 |
| TraesCS4B01G336200.1 | Wheat | cytosol | 42.81 | 48.46 |
| TraesCS7B01G078300.1 | Wheat | cytosol | 54.01 | 48.37 |
| TraesCS4B01G140800.1 | Wheat | cytosol | 41.75 | 46.7 |
| TraesCS4B01G141500.1 | Wheat | peroxisome | 56.43 | 46.22 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 29.5 | 43.43 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 26.93 | 43.1 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 37.97 | 38.2 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 39.49 | 33.63 |
| TraesCS3B01G392600.1 | Wheat | cytosol | 41.0 | 33.25 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 33.74 | 31.68 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 32.22 | 29.46 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 31.47 | 28.85 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 32.83 | 28.67 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 30.71 | 28.39 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 31.16 | 28.3 |
| TraesCS2B01G217500.1 | Wheat | cytosol | 21.63 | 25.81 |
| TraesCS2B01G239400.1 | Wheat | cytosol | 20.73 | 24.04 |
| TraesCS3B01G441600.1 | Wheat | cytosol | 19.97 | 23.91 |
| TraesCS4B01G266700.1 | Wheat | cytosol | 19.36 | 23.84 |
| TraesCS2B01G413500.1 | Wheat | cytosol | 18.91 | 19.81 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G141400.1 | EnsemblPlantsGene:TraesCS4B01G141400 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF20 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr4B:-:186590937..186592967
Molecular Weight (calculated)
73800.9 Da
IEP (calculated)
6.955
GRAVY (calculated)
-0.437
Length
661 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATPEEFLG QQGFLARLEP PSPSLFLDLP PTPRGGHDDD GHSSFDDMVL PYISRLLMEE GTEDHLFYLY PNHPAVLRAQ QPFAQILVDV ADSASASTST
101: PSPSSSSDAT ASTTPSTASA SPDDAPVQIS RPSYTDVNGH ASASPDNQSD EMAKQPSSDL FNHLLPGDQD MLNLAFLKGM EEARKFLPPD ISLPPIKEGT
201: VVGGGNAASL KKKRAAPALE PDVGRPSKLM MPEQEERNMF DEMMFQEHEI CMKGTLQNLN EKSSRKKGRS RKTTVDDSEM VDLHTLLLNC AQALSTDNRH
301: SAVELLKRIR QHSSPKGDAG QRLAHYFANG LEARLAGRGS ELYQSLLLSR ISVADFLKAN QLYMAACCCK KVAYIFADKT ICNAVAGKRR LHIVDYGLNQ
401: GLQWPGLLRM LAAREGGPPE VRITGIDLPQ PGFHGAYHIE ETGRRLRNFA RVFGVPFKFR GIPAKRETVR PEDLNIDRDE VLVVISLCQF RHLMDESLGF
501: DGPSPRDQVL NNIKKMRPDV FIHGIMNGSY GATSFLTRFR EALFHYSAQF DLLDTTVPRD NEGRLLLERD IFGRSCLNVL ACEGADRVER PETYKQWQLR
601: NHRAGLRQLP LNPEVVKLVL DKVKDNYHRN FVVDADQRWL LHRWKGRVLY AWSSWVAADA T
101: PSPSSSSDAT ASTTPSTASA SPDDAPVQIS RPSYTDVNGH ASASPDNQSD EMAKQPSSDL FNHLLPGDQD MLNLAFLKGM EEARKFLPPD ISLPPIKEGT
201: VVGGGNAASL KKKRAAPALE PDVGRPSKLM MPEQEERNMF DEMMFQEHEI CMKGTLQNLN EKSSRKKGRS RKTTVDDSEM VDLHTLLLNC AQALSTDNRH
301: SAVELLKRIR QHSSPKGDAG QRLAHYFANG LEARLAGRGS ELYQSLLLSR ISVADFLKAN QLYMAACCCK KVAYIFADKT ICNAVAGKRR LHIVDYGLNQ
401: GLQWPGLLRM LAAREGGPPE VRITGIDLPQ PGFHGAYHIE ETGRRLRNFA RVFGVPFKFR GIPAKRETVR PEDLNIDRDE VLVVISLCQF RHLMDESLGF
501: DGPSPRDQVL NNIKKMRPDV FIHGIMNGSY GATSFLTRFR EALFHYSAQF DLLDTTVPRD NEGRLLLERD IFGRSCLNVL ACEGADRVER PETYKQWQLR
601: NHRAGLRQLP LNPEVVKLVL DKVKDNYHRN FVVDADQRWL LHRWKGRVLY AWSSWVAADA T
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.