Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G141400.1 | Wheat | cytosol | 92.44 | 94.4 |
| HORVU4Hr1G027900.1 | Barley | cytosol | 90.52 | 92.3 |
| TraesCS4D01G136400.1 | Wheat | mitochondrion | 96.44 | 91.43 |
| TraesCS4A01G176400.1 | Wheat | cytosol | 60.89 | 82.53 |
| Os11t0705900-01 | Rice | cytosol | 57.33 | 60.28 |
| Zm00001d048601_P001 | Maize | cytosol | 54.67 | 57.48 |
| OQU84113 | Sorghum | cytosol, nucleus, plastid | 54.37 | 57.43 |
| TraesCS5A01G505900.1 | Wheat | cytosol | 32.0 | 53.33 |
| TraesCS4A01G176600.1 | Wheat | cytosol | 48.74 | 50.69 |
| TraesCS5A01G506100.1 | Wheat | cytosol | 45.63 | 47.9 |
| TraesCS7A01G173000.1 | Wheat | cytosol | 52.74 | 47.59 |
| TraesCS5A01G506000.1 | Wheat | cytosol | 42.52 | 47.52 |
| TraesCS4A01G176700.1 | Wheat | cytosol | 46.52 | 47.08 |
| TraesCS4A01G176500.1 | Wheat | cytosol | 34.67 | 46.99 |
| TraesCS4A01G176200.1 | Wheat | peroxisome | 54.52 | 45.89 |
| TraesCS4A01G177100.1 | Wheat | nucleus | 43.7 | 45.88 |
| TraesCS5A01G080300.1 | Wheat | cytosol | 49.19 | 44.62 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 28.74 | 43.21 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 37.19 | 38.32 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 38.96 | 33.89 |
| TraesCS3A01G360300.1 | Wheat | cytosol, extracellular, nucleus | 39.56 | 33.8 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 32.0 | 29.96 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 31.11 | 29.75 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 31.26 | 29.47 |
| TraesCS5A01G414000.1 | Wheat | cytosol | 18.52 | 29.34 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 31.26 | 29.22 |
| TraesCS5A01G409800.1 | Wheat | nucleus, plastid | 19.56 | 26.35 |
| TraesCS2A01G189600.1 | Wheat | cytosol | 21.19 | 25.81 |
| TraesCS3A01G408000.1 | Wheat | cytosol | 19.11 | 23.37 |
| TraesCS4A01G039000.1 | Wheat | nucleus | 16.89 | 23.31 |
| TraesCS2A01G214400.1 | Wheat | cytosol | 19.56 | 23.16 |
| TraesCS2A01G395400.1 | Wheat | cytosol, mitochondrion, nucleus | 17.78 | 19.02 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G176300.1 | EnsemblPlantsGene:TraesCS4A01G176300 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF20 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr4A:+:447791625..447793955
Molecular Weight (calculated)
74912.0 Da
IEP (calculated)
6.630
GRAVY (calculated)
-0.388
Length
675 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATPEEFLG QQGFLARLEP PSPSLFLDLP PTPRDDDGHS SFDDMVLPYI SRLLMEEGTE DHLFYLYPNH PAVLRAQQPF AQILVDLADS ASASGSTSSP
101: SSSSDATAST TPSTATASAS ASASPDDAPV QISRPPYTDV NGHASASPDN HSPGLLNGDE MAKRPSSDLF NHLLPRDEDM LNLAFLKGME EASKFLPPDI
201: TLSINEGTVV GGGNAVSLNN KKRAALALEP DVGRPSKLMM PEQEERKMFD EMMFQEHEIC MKGTQNLTAA VDGEPGKNSR KNGRSRKAVD DSEMVDLHTL
301: LLNCAQALST DNRQSAIELL KRIRQHSSPK GDAGQRLAHY FANGLEARLA GRGSELYQSL LLSRISVADF LKANQLYMAA CCCKKVAYIF ADKTICNAVA
401: GKRRLHIVDY GLNQGLQWPG LLRMLAAREG GPPEVRITGI DLPQPGFHGA YHIEETGHRL SNFARVFGVP FKFRGIPAKR ETVRPEDLNI DRDEVLVVIS
501: LCHFRHLMDE SLGFDGPSPR DQVLNNIRKM RPDVFIHGIM NGSYGATSFL TRFREALFHY SAQFDLLDTT APRDNEGRLL LERDIFGRSC LNVLACEGAD
601: RVERPETYKQ WQLRNHRAGL RQLPLNPVVV KLVLDKVKDN YHRNFVVDAD QRWLLHRWKG RVLYAWSSWI AADAT
101: SSSSDATAST TPSTATASAS ASASPDDAPV QISRPPYTDV NGHASASPDN HSPGLLNGDE MAKRPSSDLF NHLLPRDEDM LNLAFLKGME EASKFLPPDI
201: TLSINEGTVV GGGNAVSLNN KKRAALALEP DVGRPSKLMM PEQEERKMFD EMMFQEHEIC MKGTQNLTAA VDGEPGKNSR KNGRSRKAVD DSEMVDLHTL
301: LLNCAQALST DNRQSAIELL KRIRQHSSPK GDAGQRLAHY FANGLEARLA GRGSELYQSL LLSRISVADF LKANQLYMAA CCCKKVAYIF ADKTICNAVA
401: GKRRLHIVDY GLNQGLQWPG LLRMLAAREG GPPEVRITGI DLPQPGFHGA YHIEETGHRL SNFARVFGVP FKFRGIPAKR ETVRPEDLNI DRDEVLVVIS
501: LCHFRHLMDE SLGFDGPSPR DQVLNNIRKM RPDVFIHGIM NGSYGATSFL TRFREALFHY SAQFDLLDTT APRDNEGRLL LERDIFGRSC LNVLACEGAD
601: RVERPETYKQ WQLRNHRAGL RQLPLNPVVV KLVLDKVKDN YHRNFVVDAD QRWLLHRWKG RVLYAWSSWI AADAT
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.