Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G092000.1 | Wheat | cytosol | 81.45 | 98.38 |
| HORVU5Hr1G020900.1 | Barley | cytosol | 94.89 | 94.77 |
| Zm00001d030744_P001 | Maize | cytosol | 48.79 | 73.78 |
| Os12t0573200-01 | Rice | cytosol, plasma membrane | 71.91 | 72.49 |
| Zm00001d041536_P001 | Maize | cytosol | 65.99 | 69.15 |
| EES16206 | Sorghum | cytosol | 66.8 | 68.08 |
| TraesCS4A01G176400.1 | Wheat | cytosol | 38.58 | 57.63 |
| TraesCS5A01G505900.1 | Wheat | cytosol | 29.57 | 54.32 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 30.51 | 50.56 |
| TraesCS4A01G176300.1 | Wheat | cytosol | 44.62 | 49.19 |
| TraesCS4A01G176600.1 | Wheat | cytosol | 42.88 | 49.15 |
| TraesCS5A01G506000.1 | Wheat | cytosol | 38.44 | 47.35 |
| TraesCS7A01G173000.1 | Wheat | cytosol | 47.45 | 47.19 |
| TraesCS5A01G506100.1 | Wheat | cytosol | 40.19 | 46.5 |
| TraesCS4A01G176500.1 | Wheat | cytosol | 30.91 | 46.18 |
| TraesCS4A01G176700.1 | Wheat | cytosol | 40.32 | 44.98 |
| TraesCS4A01G177100.1 | Wheat | nucleus | 37.9 | 43.86 |
| TraesCS4A01G176200.1 | Wheat | peroxisome | 46.77 | 43.39 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 36.83 | 41.83 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 41.53 | 39.82 |
| TraesCS3A01G360300.1 | Wheat | cytosol, extracellular, nucleus | 41.4 | 38.99 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 32.26 | 33.29 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 30.78 | 31.98 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 30.11 | 31.73 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 30.65 | 31.58 |
| TraesCS5A01G414000.1 | Wheat | cytosol | 16.53 | 28.87 |
| TraesCS5A01G409800.1 | Wheat | nucleus, plastid | 18.15 | 26.95 |
| TraesCS2A01G189600.1 | Wheat | cytosol | 19.49 | 26.17 |
| TraesCS4A01G039000.1 | Wheat | nucleus | 16.53 | 25.15 |
| TraesCS3A01G408000.1 | Wheat | cytosol | 18.15 | 24.46 |
| TraesCS2A01G214400.1 | Wheat | cytosol | 17.88 | 23.33 |
| TraesCS2A01G395400.1 | Wheat | cytosol, mitochondrion, nucleus | 14.92 | 17.59 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G080300.1 | EnsemblPlantsGene:TraesCS5A01G080300 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF41 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr5A:-:100618548..100620910
Molecular Weight (calculated)
82078.2 Da
IEP (calculated)
5.368
GRAVY (calculated)
-0.406
Length
744 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSSYLPHD MDFSPYLPAD MGSPTADDPS LNLYLSDLIP GSPSEYLDLP LTPHHEQEHQ KPSPDGHGGG GGGGGGGDSP SSTPEDLVLP FISRILMEED
101: IDDKFFYDFP DNPALIEAQQ PFLEILSDPS SNSTSDDSNN RAVSPCSPSD ASVGTAAQLP PTPAAVDSYD RFQFEPVDLD PAAFFGGGAN SDLMSSAFLK
201: GMQEANKFLP SQDKLVIDLE ASSGQFFKGV EEGNKFLPRE DKLVVGFNGH AAPASAPAVL SLKKEEVVDA VSANSGGGRG RKNPYHDDEL EQEGGRSSKQ
301: SALGDDVSAR EMFDRMLMPS DEMCIVQMQN LRIAMQEAVA KNDGGGGKGA NGKGRGRRGG SDVVDLRTLL IHCAQAVATD DRRSATELLK QIKLHARPDG
401: DGTQRLAHCF AEGLQARLAG TGGLVHQSLM ATRISAVDML KAYQLYMAAI CFKKVSFLFS NSTIYNASLG KKKIHIIDYG IQYGFQWPCF LRRISTRPGG
501: PPDVRITGID LPQPGFRPRE RIEETGRRLK KYANEFNVPF EYRAIATAKM ESLRKEDLKI DPDEVLIVNS LFQFKNLMDE SVVLESPRDV VLKNIRKMRP
601: HTFIHAIVNG SFSAPFFVTR FREVLFYYSA LFDVLDTTTP RDNEQRMLIE QNILGRAALN VIACEGTDRV ERPETYKQWQ VRNQRAGLKL LPLNPEVIEL
701: ARDKVKNCYH KDFVIDIDQH WLLQGWKGRI LYAISTWTAN DASS
101: IDDKFFYDFP DNPALIEAQQ PFLEILSDPS SNSTSDDSNN RAVSPCSPSD ASVGTAAQLP PTPAAVDSYD RFQFEPVDLD PAAFFGGGAN SDLMSSAFLK
201: GMQEANKFLP SQDKLVIDLE ASSGQFFKGV EEGNKFLPRE DKLVVGFNGH AAPASAPAVL SLKKEEVVDA VSANSGGGRG RKNPYHDDEL EQEGGRSSKQ
301: SALGDDVSAR EMFDRMLMPS DEMCIVQMQN LRIAMQEAVA KNDGGGGKGA NGKGRGRRGG SDVVDLRTLL IHCAQAVATD DRRSATELLK QIKLHARPDG
401: DGTQRLAHCF AEGLQARLAG TGGLVHQSLM ATRISAVDML KAYQLYMAAI CFKKVSFLFS NSTIYNASLG KKKIHIIDYG IQYGFQWPCF LRRISTRPGG
501: PPDVRITGID LPQPGFRPRE RIEETGRRLK KYANEFNVPF EYRAIATAKM ESLRKEDLKI DPDEVLIVNS LFQFKNLMDE SVVLESPRDV VLKNIRKMRP
601: HTFIHAIVNG SFSAPFFVTR FREVLFYYSA LFDVLDTTTP RDNEQRMLIE QNILGRAALN VIACEGTDRV ERPETYKQWQ VRNQRAGLKL LPLNPEVIEL
701: ARDKVKNCYH KDFVIDIDQH WLLQGWKGRI LYAISTWTAN DASS
001: MDPNFSESLN GFEYFDGNPN LLTDPMEDQY PPPSDTLLKY VSEILMEESN GDYKQSMFYD SLALRKTEEM LQQVITDSQN QSFSPADSLI TNSWDASGSI
101: DESAYSADPQ PVNEIMVKSM FSDAESALQF KKGVEEASKF LPNSDQWVIN LDIERSERRD SVKEEMGLDQ LRVKKNHERD FEEVRSSKQF ASNVEDSKVT
201: DMFDKVLLLD GECDPQTLLD SEIQAIRSSK NIGEKGKKKK KKKSQVVDFR TLLTHCAQAI STGDKTTALE FLLQIRQQSS PLGDAGQRLA HCFANALEAR
301: LQGSTGPMIQ TYYNALTSSL KDTAADTIRA YRVYLSSSPF VTLMYFFSIW MILDVAKDAP VLHIVDFGIL YGFQWPMFIQ SISDRKDVPR KLRITGIELP
401: QCGFRPAERI EETGRRLAEY CKRFNVPFEY KAIASQNWET IRIEDLDIRP NEVLAVNAGL RLKNLQDETG SEENCPRDAV LKLIRNMNPD VFIHAIVNGS
501: FNAPFFISRF KEAVYHYSAL FDMFDSTLPR DNKERIRFER EFYGREAMNV IACEEADRVE RPETYRQWQV RMVRAGFKQK TIKPELVELF RGKLKKWRYH
601: KDFVVDENSK WLLQGWKGRT LYASSCWVPA
101: DESAYSADPQ PVNEIMVKSM FSDAESALQF KKGVEEASKF LPNSDQWVIN LDIERSERRD SVKEEMGLDQ LRVKKNHERD FEEVRSSKQF ASNVEDSKVT
201: DMFDKVLLLD GECDPQTLLD SEIQAIRSSK NIGEKGKKKK KKKSQVVDFR TLLTHCAQAI STGDKTTALE FLLQIRQQSS PLGDAGQRLA HCFANALEAR
301: LQGSTGPMIQ TYYNALTSSL KDTAADTIRA YRVYLSSSPF VTLMYFFSIW MILDVAKDAP VLHIVDFGIL YGFQWPMFIQ SISDRKDVPR KLRITGIELP
401: QCGFRPAERI EETGRRLAEY CKRFNVPFEY KAIASQNWET IRIEDLDIRP NEVLAVNAGL RLKNLQDETG SEENCPRDAV LKLIRNMNPD VFIHAIVNGS
501: FNAPFFISRF KEAVYHYSAL FDMFDSTLPR DNKERIRFER EFYGREAMNV IACEEADRVE RPETYRQWQV RMVRAGFKQK TIKPELVELF RGKLKKWRYH
601: KDFVVDENSK WLLQGWKGRT LYASSCWVPA
Arabidopsis Description
SCL34Scarecrow-like protein 34 [Source:UniProtKB/Swiss-Prot;Acc:P0C884]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.