Subcellular Localization
min:
: max
Winner_takes_all: extracellular, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- mitochondrion 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G354100.1 | Wheat | cytosol, extracellular, nucleus | 95.95 | 92.67 |
| TraesCS3B01G392600.1 | Wheat | cytosol | 95.44 | 92.52 |
| HORVU3Hr1G086210.1 | Barley | cytosol, nucleus, plasma membrane | 90.13 | 90.01 |
| Os01t0842200-01 | Rice | cytosol | 73.04 | 70.37 |
| EES01740 | Sorghum | cytosol | 71.77 | 70.26 |
| Zm00001d042907_P001 | Maize | cytosol | 70.63 | 68.97 |
| TraesCS5A01G505900.1 | Wheat | cytosol | 25.32 | 49.38 |
| TraesCS4A01G176400.1 | Wheat | cytosol | 30.13 | 47.79 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 35.57 | 42.9 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 41.65 | 42.4 |
| TraesCS5A01G080300.1 | Wheat | cytosol | 38.99 | 41.4 |
| TraesCS4A01G176600.1 | Wheat | cytosol | 33.67 | 40.99 |
| TraesCS5A01G506000.1 | Wheat | cytosol | 30.38 | 39.74 |
| TraesCS4A01G177100.1 | Wheat | nucleus | 32.28 | 39.66 |
| TraesCS4A01G176300.1 | Wheat | cytosol | 33.8 | 39.56 |
| TraesCS7A01G173000.1 | Wheat | cytosol | 37.22 | 39.3 |
| TraesCS5A01G506100.1 | Wheat | cytosol | 31.65 | 38.88 |
| TraesCS4A01G176500.1 | Wheat | cytosol | 24.3 | 38.55 |
| TraesCS4A01G176700.1 | Wheat | cytosol | 32.03 | 37.93 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 32.53 | 36.4 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 32.53 | 35.64 |
| TraesCS4A01G176200.1 | Wheat | peroxisome | 35.7 | 35.16 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 31.65 | 34.63 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 31.27 | 34.5 |
| TraesCS5A01G414000.1 | Wheat | cytosol | 15.32 | 28.4 |
| TraesCS2A01G189600.1 | Wheat | cytosol | 17.85 | 25.45 |
| TraesCS5A01G409800.1 | Wheat | nucleus, plastid | 15.82 | 24.95 |
| TraesCS2A01G214400.1 | Wheat | cytosol | 16.84 | 23.33 |
| TraesCS4A01G039000.1 | Wheat | nucleus | 14.05 | 22.7 |
| TraesCS3A01G408000.1 | Wheat | cytosol | 14.94 | 21.38 |
| TraesCS2A01G395400.1 | Wheat | cytosol, mitochondrion, nucleus | 13.29 | 16.64 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G360300.1 | EnsemblPlantsGene:TraesCS3A01G360300 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF131 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr3A:+:608189211..608191673
Molecular Weight (calculated)
86893.0 Da
IEP (calculated)
5.447
GRAVY (calculated)
-0.297
Length
790 amino acids
Sequence
(BLAST)
(BLAST)
001: MLCGGGGGVS MVMDAALRDW CGPLPGGSKL PAYPQIPDGF TAEELESLLL FPSDGADAAA CPNAAAAPPL LPSPAASADS ASPPPPRDAS GSASSPAAAA
101: AGQAHPQPDD SEVFSDIVLG YINRMLMAED IDEKFDHYPA HPALLAAEKP FLEILADQPP CSGGSTVESP DGSSVTTNSF NSHGSCNCAA PSGGGLGAMQ
201: APPALEFPTA EFLQPPQFYQ DLSPESCVVE AGGAWPPYDA MEFNPLPDAL LSQSSSFASS NGSSVAFSEG FEPWLSTAGA VPDAALSDFV LQSQQAAQFS
301: RGFEEASRFL PQESKLVIDV DSLPSVWVKE DKKVVEVKKE KADSEVAIHR GKKHFYGDDL DADEVRCCKH SAPVVDADHL VREMMDKVLL CNGETCSRGV
401: KKQVKQPKKE VVDLETLLIH CAQSVSIDDR RSATDLLKQI RQHASATGDG DQRLAHCFAN GLEARLAGNG SQIYKLHTIS RFACTDVLKA YQLYLAACPF
501: KKISHYFANQ TIMNAVEKAK KVHIVDFGVY YGFQWPCLIQ RLSKRLGGPP ELRITAIDTP QPGFRPAERI EEIGRYLSDY AQTFKVPFKY HGIASQFEAV
601: RVEDLHIEKD EILIVNSMFR FKTLMDESVV AESPRNMVLN TIRKMKPHVF IHGVTNGSYN APFFVSRFRE ALFQFSAHFD MLEANIPRDN EERLLIESTI
701: FSREAINVIS CEGMERMERP ETYKQWQVRN QRAGFKQLPL DPEIMKRARE KVKCYHKNFI IDEDNRWLLQ GWKGRILYAL STWKANPQSS
101: AGQAHPQPDD SEVFSDIVLG YINRMLMAED IDEKFDHYPA HPALLAAEKP FLEILADQPP CSGGSTVESP DGSSVTTNSF NSHGSCNCAA PSGGGLGAMQ
201: APPALEFPTA EFLQPPQFYQ DLSPESCVVE AGGAWPPYDA MEFNPLPDAL LSQSSSFASS NGSSVAFSEG FEPWLSTAGA VPDAALSDFV LQSQQAAQFS
301: RGFEEASRFL PQESKLVIDV DSLPSVWVKE DKKVVEVKKE KADSEVAIHR GKKHFYGDDL DADEVRCCKH SAPVVDADHL VREMMDKVLL CNGETCSRGV
401: KKQVKQPKKE VVDLETLLIH CAQSVSIDDR RSATDLLKQI RQHASATGDG DQRLAHCFAN GLEARLAGNG SQIYKLHTIS RFACTDVLKA YQLYLAACPF
501: KKISHYFANQ TIMNAVEKAK KVHIVDFGVY YGFQWPCLIQ RLSKRLGGPP ELRITAIDTP QPGFRPAERI EEIGRYLSDY AQTFKVPFKY HGIASQFEAV
601: RVEDLHIEKD EILIVNSMFR FKTLMDESVV AESPRNMVLN TIRKMKPHVF IHGVTNGSYN APFFVSRFRE ALFQFSAHFD MLEANIPRDN EERLLIESTI
701: FSREAINVIS CEGMERMERP ETYKQWQVRN QRAGFKQLPL DPEIMKRARE KVKCYHKNFI IDEDNRWLLQ GWKGRILYAL STWKANPQSS
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.