Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G174300.1 | Wheat | cytosol | 93.18 | 95.61 |
| TraesCS7B01G078300.1 | Wheat | cytosol | 91.98 | 93.22 |
| TraesCS7B01G077800.1 | Wheat | cytosol | 90.91 | 92.52 |
| TraesCS7D01G174100.1 | Wheat | cytosol | 86.36 | 92.02 |
| Os11t0705200-01 | Rice | cytosol | 59.09 | 63.87 |
| TraesCS4A01G176400.1 | Wheat | cytosol | 41.31 | 62.05 |
| OQU84105 | Sorghum | cytosol | 57.49 | 58.9 |
| TraesCS5A01G505900.1 | Wheat | cytosol | 31.55 | 58.27 |
| Zm00001d048604_P001 | Maize | cytosol | 59.22 | 57.91 |
| TraesCS4A01G176200.1 | Wheat | peroxisome | 60.96 | 56.86 |
| TraesCS4A01G176600.1 | Wheat | cytosol | 47.33 | 54.55 |
| KXG36217 | Sorghum | cytosol | 60.03 | 54.1 |
| TraesCS4A01G176300.1 | Wheat | cytosol | 47.59 | 52.74 |
| TraesCS5A01G506000.1 | Wheat | cytosol | 39.97 | 49.5 |
| TraesCS4A01G176500.1 | Wheat | cytosol | 32.62 | 49.0 |
| TraesCS4A01G177100.1 | Wheat | nucleus | 41.18 | 47.9 |
| TraesCS4A01G176700.1 | Wheat | cytosol | 42.65 | 47.83 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 28.61 | 47.66 |
| TraesCS5A01G080300.1 | Wheat | cytosol | 47.19 | 47.45 |
| TraesCS5A01G506100.1 | Wheat | cytosol | 40.64 | 47.28 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 35.03 | 40.0 |
| TraesCS3A01G360300.1 | Wheat | cytosol, extracellular, nucleus | 39.3 | 37.22 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 38.37 | 36.98 |
| Zm00001d048603_P001 | Maize | cytosol | 61.1 | 32.12 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 30.75 | 31.9 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 30.08 | 31.87 |
| TraesCS5A01G414000.1 | Wheat | cytosol | 17.65 | 30.99 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 28.88 | 30.17 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 28.74 | 29.78 |
| TraesCS5A01G409800.1 | Wheat | nucleus, plastid | 19.39 | 28.94 |
| TraesCS2A01G189600.1 | Wheat | cytosol | 20.19 | 27.26 |
| TraesCS3A01G408000.1 | Wheat | cytosol | 18.98 | 25.72 |
| TraesCS4A01G039000.1 | Wheat | nucleus | 15.91 | 24.34 |
| TraesCS2A01G214400.1 | Wheat | cytosol | 17.78 | 23.33 |
| TraesCS2A01G395400.1 | Wheat | cytosol, mitochondrion, nucleus | 16.18 | 19.18 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G173000.1 | EnsemblPlantsGene:TraesCS7A01G173000 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF59 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr7A:+:127607258..127609504
Molecular Weight (calculated)
82491.2 Da
IEP (calculated)
4.866
GRAVY (calculated)
-0.461
Length
748 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEEFSPLSP SLFLDLPPTP PPAADVDLDF ISRMLMEEDI DDKFFYQYPD QPAILDAQRP YQQIISDTTT TSSGSPNGTT SSCSPNGTTF SDGNAMSRSN
101: AATSSSEETN NFSWPYDPLE LSQLLRSPPY LDDMLFGGLV PDSPADEDTR NSFVADAPAA GFQQSPPQFK GAADGAGAFF GQNGGSPGTQ SSAVLNGPAE
201: EKEAERKPAM FSAGDGGQGG LLSAFFSNGG DMDMLNSAFL KGMEEANKFL PTNNTLLEAI PGKEKERGFI VKKEEAANGT PTSGNGRRGR KYRYEEDDLD
301: AETARSSKLM MPDSEETGAR EMFDEIMLEG YETCMQGIEE LRLAMDSEAK KKNGKAARAK KSEVVDLRTM LIHCAQAVAA GDRRGATELL RQIKQHSGPT
401: GDATQRLAHC FAEGLEARLA GTGSQVYQSL VAKRTSVVEF LKAYKLFMAA CCFKKANFGF ANKTILNAVA GKRRLHIVDF GVQYGLQWPG LMRWLAQRDG
501: GPPEVRITGI DLPQPGFRPA RQVEETGRRL SSCARELGVP FKFHGVAAKW DTVRGEDLRI DPDEVLVVHC QCGLRNLMDD SIAVTTSSSS PRDVVLRNIR
601: DMKPDVFVEC VANGGYGAPF FVTRFREALF FYSAHFDILD ATIPRDNDER LMIERDLIGR GALNVIACEG ADRVERPETY RQWQARNRRA GLRQLPLDLE
701: VVGMVREKVR EHYHKDFLID VDHQWLLQGW KGRVLYALST WVAADDDS
101: AATSSSEETN NFSWPYDPLE LSQLLRSPPY LDDMLFGGLV PDSPADEDTR NSFVADAPAA GFQQSPPQFK GAADGAGAFF GQNGGSPGTQ SSAVLNGPAE
201: EKEAERKPAM FSAGDGGQGG LLSAFFSNGG DMDMLNSAFL KGMEEANKFL PTNNTLLEAI PGKEKERGFI VKKEEAANGT PTSGNGRRGR KYRYEEDDLD
301: AETARSSKLM MPDSEETGAR EMFDEIMLEG YETCMQGIEE LRLAMDSEAK KKNGKAARAK KSEVVDLRTM LIHCAQAVAA GDRRGATELL RQIKQHSGPT
401: GDATQRLAHC FAEGLEARLA GTGSQVYQSL VAKRTSVVEF LKAYKLFMAA CCFKKANFGF ANKTILNAVA GKRRLHIVDF GVQYGLQWPG LMRWLAQRDG
501: GPPEVRITGI DLPQPGFRPA RQVEETGRRL SSCARELGVP FKFHGVAAKW DTVRGEDLRI DPDEVLVVHC QCGLRNLMDD SIAVTTSSSS PRDVVLRNIR
601: DMKPDVFVEC VANGGYGAPF FVTRFREALF FYSAHFDILD ATIPRDNDER LMIERDLIGR GALNVIACEG ADRVERPETY RQWQARNRRA GLRQLPLDLE
701: VVGMVREKVR EHYHKDFLID VDHQWLLQGW KGRVLYALST WVAADDDS
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.