Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G174100.1 | Wheat | cytosol | 89.99 | 93.45 |
| TraesCS7B01G078300.1 | Wheat | cytosol | 94.51 | 93.36 |
| TraesCS7A01G173000.1 | Wheat | cytosol | 95.61 | 93.18 |
| Os11t0705200-01 | Rice | cytosol | 59.95 | 63.15 |
| OQU84105 | Sorghum | cytosol | 59.12 | 59.04 |
| TraesCS4D01G136500.1 | Wheat | peroxisome | 61.18 | 58.15 |
| Zm00001d048604_P001 | Maize | cytosol | 60.91 | 58.04 |
| TraesCS4D01G136000.1 | Wheat | cytosol | 48.56 | 54.55 |
| TraesCS4D01G136300.1 | Wheat | cytosol | 50.34 | 54.45 |
| KXG36217 | Sorghum | cytosol | 61.73 | 54.22 |
| TraesCS4D01G136100.1 | Wheat | cytosol | 41.84 | 52.23 |
| TraesCS5D01G092000.1 | Wheat | cytosol | 43.76 | 51.79 |
| TraesCS4D01G136200.1 | Wheat | cytosol | 42.25 | 50.66 |
| TraesCS4D01G136400.1 | Wheat | mitochondrion | 48.83 | 50.0 |
| TraesCS4D01G135900.1 | Wheat | cytosol | 43.07 | 49.22 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 29.22 | 47.44 |
| TraesCS4D01G135500.1 | Wheat | cytosol | 41.7 | 47.06 |
| TraesCS4D01G332000.1 | Wheat | cytosol | 43.07 | 46.52 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 35.39 | 39.27 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 39.37 | 37.08 |
| TraesCS3D01G354100.1 | Wheat | cytosol, extracellular, nucleus | 39.78 | 35.45 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 32.65 | 33.38 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 31.82 | 33.1 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 32.1 | 32.28 |
| Zm00001d048603_P001 | Maize | cytosol | 62.55 | 32.05 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 29.36 | 31.01 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 30.59 | 30.59 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 29.9 | 30.19 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 27.02 | 29.14 |
| TraesCS5D01G419400.2 | Wheat | cytosol | 20.58 | 27.27 |
| TraesCS2D01G198200.1 | Wheat | cytosol | 20.58 | 27.03 |
| TraesCS3D01G403100.1 | Wheat | cytosol | 19.34 | 25.54 |
| TraesCS4D01G266400.1 | Wheat | cytosol | 18.52 | 25.19 |
| TraesCS2D01G220200.1 | Wheat | cytosol | 18.38 | 23.51 |
| TraesCS2D01G393200.1 | Wheat | cytosol | 16.74 | 19.46 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G174300.1 | EnsemblPlantsGene:TraesCS7D01G174300 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF59 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr7D:+:126681685..126683874
Molecular Weight (calculated)
80246.5 Da
IEP (calculated)
4.699
GRAVY (calculated)
-0.452
Length
729 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEEFSPLSP SLFLDLPPTP PPAADVDLDF ISRMLMEEDI DDKFFYQYPD QPAILDAQRP YEQIISDTTT TSSGSPNGTT SSDGNAATSS SEETNNSSWP
101: YDPLELSQLL RSPPYLDDML FGGLVPDSPA DEDARDSFLA DAPAAGFQQS PAEFKGAADW AGAFSGQNGG SPGTQSSAVL NGPAEEKGAE RKPAMFSAGD
201: GGQGGLLSAF FSNGGDMDML NSAFLKGMEE ANKFLPTNNT LLEAIPGKER GFTVKKDEVA NGTPTSGNGR GRKYRYDEDD LEAETARSSK LMMPDNEETG
301: AREMFDEIML EGYETCMQGI EELRLAMDSE AKKKNGKAAR GKKSEAVDLR TMLIHCAQAV AAGDRRGATE LLRQIKQHSG PTGDATQRLA HCFAEGLEAR
401: LAGTGSQVYQ SLVAKRTSVV EFLKAYKLFM AACCFKKANF GFANKTILNA VTGKPRLHIV DFGVQYGLQW PGLMRWLAQR DGGPPEVRIT GIDLPQPGFR
501: PARQVEETGR RLSSCARELG VPFKFHGVAA KWDTVRAEDL RIDPEEVLVV HCQCGLRNLM DDSVAVTTSS SSPRDVVLRN IRDMRPDVFV ECVANGGYGA
601: PFFVTRFREA MFFYSAHFDM LDATIPRDND VRLLIEQDLI GPGALNVIAC EGADRVERPE TYRQWQARNR RAGLRQLPLD PEVVGMVREK VREHYHKDFL
701: IDVDHQWLLQ GWKGRVLYAL STWVADDNS
101: YDPLELSQLL RSPPYLDDML FGGLVPDSPA DEDARDSFLA DAPAAGFQQS PAEFKGAADW AGAFSGQNGG SPGTQSSAVL NGPAEEKGAE RKPAMFSAGD
201: GGQGGLLSAF FSNGGDMDML NSAFLKGMEE ANKFLPTNNT LLEAIPGKER GFTVKKDEVA NGTPTSGNGR GRKYRYDEDD LEAETARSSK LMMPDNEETG
301: AREMFDEIML EGYETCMQGI EELRLAMDSE AKKKNGKAAR GKKSEAVDLR TMLIHCAQAV AAGDRRGATE LLRQIKQHSG PTGDATQRLA HCFAEGLEAR
401: LAGTGSQVYQ SLVAKRTSVV EFLKAYKLFM AACCFKKANF GFANKTILNA VTGKPRLHIV DFGVQYGLQW PGLMRWLAQR DGGPPEVRIT GIDLPQPGFR
501: PARQVEETGR RLSSCARELG VPFKFHGVAA KWDTVRAEDL RIDPEEVLVV HCQCGLRNLM DDSVAVTTSS SSPRDVVLRN IRDMRPDVFV ECVANGGYGA
601: PFFVTRFREA MFFYSAHFDM LDATIPRDND VRLLIEQDLI GPGALNVIAC EGADRVERPE TYRQWQARNR RAGLRQLPLD PEVVGMVREK VREHYHKDFL
701: IDVDHQWLLQ GWKGRVLYAL STWVADDNS
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.