CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0705200-01	Rice	cytosol	60.55	63.87
KXG36217	Sorghum	cytosol	69.86	61.45
KXG29219	Sorghum	cytosol	56.3	59.65
TraesCS7D01G174300.1	Wheat	cytosol	59.04	59.12
TraesCS7B01G078300.1	Wheat	cytosol	58.9	58.27
TraesCS7B01G077800.1	Wheat	cytosol	58.36	57.96
TraesCS7A01G173000.1	Wheat	cytosol	58.9	57.49
HORVU4Hr1G027920.1	Barley	peroxisome	62.19	57.25
TraesCS7D01G174100.1	Wheat	cytosol	54.66	56.84
TraesCS4D01G136500.1	Wheat	peroxisome	59.45	56.58
TraesCS4B01G141500.1	Wheat	peroxisome	62.19	56.26
TraesCS4A01G176200.1	Wheat	peroxisome	61.1	55.61
OQU84111	Sorghum	cytosol	49.45	53.56
OQU90003	Sorghum	cytosol	55.75	52.72
EES09053	Sorghum	cytosol	45.89	52.34
OQU84113	Sorghum	cytosol, nucleus, plastid	45.75	52.27
OQU84115	Sorghum	cytosol	34.79	52.16
OQU84112	Sorghum	cytosol	50.14	51.05
EES16206	Sorghum	cytosol	50.27	50.27
KXG29223	Sorghum	cytosol	48.36	49.65
OQU84120	Sorghum	nucleus	42.19	48.58
GSMUA_Achr5P08320_001	Banana	cytosol	29.59	48.11
OQU84114	Sorghum	mitochondrion	31.37	47.81
KXG29224	Sorghum	nucleus	44.79	47.19
KXG29228	Sorghum	cytosol	40.0	47.17
KXG26392	Sorghum	cytosol	40.96	47.16
OQU83981	Sorghum	cytosol	31.92	46.88
OQU84116	Sorghum	nucleus	39.73	46.85
OQU84106	Sorghum	cytosol, endoplasmic reticulum, plastid	49.73	45.09
OQU83980	Sorghum	cytosol	38.36	45.09
Zm00001d048603_P001	Maize	cytosol	86.71	44.48
OQU83979	Sorghum	plastid	36.71	44.15
KXG29232	Sorghum	cytosol	41.1	44.12
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	38.08	43.78
OQU83978	Sorghum	mitochondrion	37.4	43.13
OQU81651	Sorghum	cytosol	40.96	42.71
OQU92829	Sorghum	cytosol	40.82	40.6
KXG38103	Sorghum	cytosol	34.66	40.42
KXG21079	Sorghum	cytosol	33.42	39.17
KXG37250	Sorghum	cytosol	34.66	38.86
KXG21080	Sorghum	cytosol	33.29	38.82
EES01740	Sorghum	cytosol	41.92	37.92
OQU91407	Sorghum	nucleus	31.92	33.97
KXG38064	Sorghum	nucleus	32.05	32.5
EER91260	Sorghum	nucleus	31.92	32.32
OQU91406	Sorghum	nucleus	32.88	32.09
EES18882	Sorghum	cytosol	31.23	31.11
EES18880	Sorghum	cytosol	30.41	29.96
EER97449	Sorghum	cytosol	19.73	26.33
EER95348	Sorghum	cytosol	17.95	24.44
EER97346	Sorghum	cytosol	18.08	23.16
EES18257	Sorghum	cytosol	17.53	22.74
KXG33821	Sorghum	cytosol	17.53	22.5
EES05727	Sorghum	cytosol	16.44	19.08
EES12703	Sorghum	cytosol, nucleus, plastid	14.79	16.56

Protein Annotations

MapMan:15.5.12	UniProt:A0A1Z5RKX2	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	EnsemblPlants:OQU84105	ProteinID:OQU84105
ProteinID:OQU84105.1	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF59	EnsemblPlantsGene:SORBI_3005G229400
InterPro:TF_GRAS	UniParc:UPI000B8BA64C	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:71649933..71652353

Molecular Weight (calculated)

81023.6 Da

IEP (calculated)

4.949

GRAVY (calculated)

-0.387

Length

730 amino acids

Sequence
(BLAST)

001: MSAAPEEFLA QGTYLAAPEP FSPSIFLDLP PTPRPDGDDP TSDDPASSDD LVLPFISRML MEEDIDDKFF YQFPDHPALL SAQQPYAQIL SDATAASSSD
101: SAAITSSGTG GSSTFSSSSS APASADPTWP YDPIELSQLL RSPPYPDMGV GLDDFTADEV NAVFSPGQDA AFQPTFFGAQ NGENMDMLNM AFLKGMEEAK
201: KFLPTNNSLL INLDDTSGQS LPTDRDIKSS TAFVATQVKE EEVSLKKKEE VDGISLFRGI SNGRGRKNHH SQEDLEVETG RNSKLMMPEQ EEAGASELFD
301: ELMSGKHDGF LKNMQDLRIA MDSESEKSAR RVSGKGARGK QHGNEFVDLH TMLIHCAQAM ATGDRRSATE MLKQIKQHSS LRGDASERLA YCFAEGLEAR
401: LAGTGSQVYQ SLVAKRTSVV EFLKAYKLFL AAISLNKVHI FFSNRNIMDS VAGRSKLHIV AYGVQHGLQW PGLLNSLAGR EGGPPEVRFT GIDLPQPGFR
501: PAYQIEETGR RLSNCAREFG VPFKFHAIAA KWETICAKDL NIDPDEVLVV NSECHFSNLM DESVDADTPS PRDLVLNNIR KMQPNIFIQI VHSGTFGAPF
601: FLTRFREALF YYSALFDMLD ATIPRDNDVR LLIERDIVGR SALNVIACEG ADRLDRPETY KQWQVRNHRA GLKQLPLNPE IVKLARDKVK KYYHKDFLID
701: EDHRWLLQGW KGRVLFAMST WVAEDNNSIC

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.