CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU84106	Sorghum	cytosol, endoplasmic reticulum, plastid	82.81	65.84
KXG29219	Sorghum	cytosol	59.84	55.59
OQU84111	Sorghum	cytosol	52.66	50.0
OQU84105	Sorghum	cytosol	52.34	45.89
OQU84112	Sorghum	cytosol	51.09	45.61
KXG29224	Sorghum	nucleus	49.22	45.45
OQU84115	Sorghum	cytosol	34.06	44.76
OQU84113	Sorghum	cytosol, nucleus, plastid	44.69	44.76
KXG29223	Sorghum	cytosol	49.69	44.73
OQU90003	Sorghum	cytosol	53.28	44.17
EES16206	Sorghum	cytosol	50.0	43.84
KXG36217	Sorghum	cytosol	56.41	43.49
OQU84116	Sorghum	nucleus	40.94	42.33
OQU84120	Sorghum	nucleus	40.78	41.17
GSMUA_Achr5P08320_001	Banana	cytosol	28.59	40.76
KXG26392	Sorghum	cytosol	40.16	40.54
OQU84114	Sorghum	mitochondrion	30.0	40.08
KXG29232	Sorghum	cytosol	41.41	38.97
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	38.59	38.9
KXG29228	Sorghum	cytosol	37.5	38.77
OQU83981	Sorghum	cytosol	29.84	38.43
OQU83980	Sorghum	cytosol	36.56	37.68
OQU83979	Sorghum	plastid	35.62	37.56
KXG38103	Sorghum	cytosol	35.62	36.42
OQU83978	Sorghum	mitochondrion	35.47	35.86
OQU81651	Sorghum	cytosol	38.91	35.57
KXG21079	Sorghum	cytosol	34.38	35.31
OQU92829	Sorghum	cytosol	39.06	34.06
KXG21080	Sorghum	cytosol	33.28	34.03
KXG37250	Sorghum	cytosol	33.44	32.87
EES01740	Sorghum	cytosol	37.66	29.86
EES18882	Sorghum	cytosol	32.34	28.24
OQU91407	Sorghum	nucleus	29.69	27.7
EES18880	Sorghum	cytosol	31.41	27.13
EER91260	Sorghum	nucleus	30.16	26.77
KXG38064	Sorghum	nucleus	29.38	26.11
OQU91406	Sorghum	nucleus	29.53	25.27
EER97449	Sorghum	cytosol	18.91	22.12
EES18257	Sorghum	cytosol	18.75	21.31
KXG33821	Sorghum	cytosol	18.75	21.09
EER95348	Sorghum	cytosol	17.03	20.34
EER97346	Sorghum	cytosol	17.5	19.65
EES05727	Sorghum	cytosol	17.5	17.81
EES12703	Sorghum	cytosol, nucleus, plastid	15.78	15.49

Protein Annotations

MapMan:15.5.12	UniProt:C5Y8L5	EnsemblPlants:EES09053	ProteinID:EES09053	ProteinID:EES09053.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR005202	PFAM:PF03514
PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF41	EnsemblPlantsGene:SORBI_3005G229700	unigene:Sbi.8918	InterPro:TF_GRAS
UniParc:UPI0001A8684C	RefSeq:XP_002450065.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:71667519..71669800

Molecular Weight (calculated)

70541.4 Da

IEP (calculated)

4.745

GRAVY (calculated)

-0.342

Length

640 amino acids

Sequence
(BLAST)

001: MAASPEDFVA EPAEPPFSPS IFLDLPPTPC PDGNGEGKDP ASDDLGLPFI ERMLMEEGIH EEFFYQYPDH PALLQAQESY ARVLSDATAD STSYGSPTVS
101: VSSSGSDDLT TDASTGSEQS PAQAQLRDGG ARSDAAAAEE EMEEKANSTM LAAVDDDHAA LASAFFSAQQ DAGSNAMLNL AFLKGMEEAN KFLPRDIDLL
201: RGSATVLQVK EEAEEEGTAN LGRGRKNLHN WDDVLEANLG RERKMMAPEP EESGEVVDEM IANGFQLFLR EVESLRISMG SEAEKKKSRK GNARSANGVA
301: DLCALLMHCA QAVAMDDRCS AAELLRKIKK HSSPRGDAAQ RLARYFAEGL EARLAGSGSP VYNSLMAKRT SVVDFLKAYR LYAAACCFRM MAFKFANLTI
401: SKAIAGRKKP GFRPAARVKE TGRRLSSYAS QFGVPFKYRG IAAKWETVGV DDLDIDPDEV LIVNSILHFG NLMDEGVDMS SPSPRDVVLS NIRKMRPDVF
501: ILFIMNGTYS SPYFVPRFRE ALFHYSAMFD MMDATTPRDS DLRVLVERDL FGQCAQNVIA CEGLDRVERP ETYKKWQLRN HRAGLRQLSL DPDIVKAVQE
601: SVRDKFHEDF VTDVDLQWLL GGWKGRILYA MSTWAAADAI

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.