CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0881500-01	Rice	cytosol	86.64	89.15
TraesCS3D01G403100.1	Wheat	cytosol	84.71	87.32
TraesCS3A01G408000.1	Wheat	cytosol	84.53	87.14
TraesCS3B01G441600.1	Wheat	cytosol	84.36	86.96
HORVU3Hr1G091250.1	Barley	cytosol	83.66	86.23
EES18257	Sorghum	cytosol	72.41	73.18
GSMUA_Achr6P11780_001	Banana	cytosol	43.59	72.51
Bra017915.1-P	Field mustard	cytoskeleton, cytosol, nucleus, plastid	44.82	62.5
GSMUA_Achr10P...	Banana	cytosol	59.93	61.78
GSMUA_Achr3P02410_001	Banana	nucleus	58.0	56.22
VIT_04s0044g01370.t01	Wine grape	nucleus	55.71	55.81
VIT_18s0001g15270.t01	Wine grape	cytosol, plastid	54.66	55.04
KRH18097	Soybean	cytosol	54.31	52.28
KRH64568	Soybean	cytosol	54.66	52.18
KRH53364	Soybean	cytosol	54.83	52.0
CDY61060	Canola	cytosol	49.21	51.95
CDY00377	Canola	cytosol	49.91	51.64
CDY50240	Canola	cytosol	51.85	51.22
KRH15917	Soybean	cytosol	53.08	51.1
PGSC0003DMT400063944	Potato	cytosol, mitochondrion	50.09	50.98
Solyc04g064550.1.1	Tomato	mitochondrion	50.44	50.98
CDY68224	Canola	cytosol	51.49	50.87
Bra012280.1-P	Field mustard	cytosol	49.03	50.82
AT1G21450.1	Thale cress	nucleus	50.79	48.74
EER97449	Sorghum	cytosol	37.61	39.12
EER95348	Sorghum	cytosol	36.03	38.25
EER97346	Sorghum	cytosol	37.96	37.89
EES05727	Sorghum	cytosol	29.35	26.55
EES12703	Sorghum	cytosol, nucleus, plastid	28.65	25.0
OQU83981	Sorghum	cytosol	20.74	23.74
KXG21079	Sorghum	cytosol	23.73	21.67
OQU84115	Sorghum	cytosol	18.45	21.56
KXG21080	Sorghum	cytosol	23.37	21.25
KXG38103	Sorghum	cytosol	23.2	21.09
OQU84116	Sorghum	nucleus	21.97	20.19
OQU84113	Sorghum	cytosol, nucleus, plastid	22.32	19.87
OQU84120	Sorghum	nucleus	21.97	19.72
OQU84111	Sorghum	cytosol	23.02	19.44
OQU83979	Sorghum	plastid	20.39	19.11
OQU91407	Sorghum	nucleus	22.85	18.95
KXG29228	Sorghum	cytosol	20.56	18.9
KXG29219	Sorghum	cytosol	22.85	18.87
KXG26392	Sorghum	cytosol	20.91	18.77
EES09053	Sorghum	cytosol	21.09	18.75
KXG37250	Sorghum	cytosol	21.27	18.59
KXG29232	Sorghum	cytosol	22.14	18.53
OQU83980	Sorghum	cytosol	20.21	18.52
KXG38064	Sorghum	nucleus	23.37	18.47
KXG29223	Sorghum	cytosol	23.02	18.42
EES16206	Sorghum	cytosol	23.37	18.22
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	20.21	18.11
OQU84112	Sorghum	cytosol	22.67	17.99
OQU92829	Sorghum	cytosol	22.67	17.57
OQU84105	Sorghum	cytosol	22.5	17.53
EER91260	Sorghum	nucleus	21.97	17.34
KXG29224	Sorghum	nucleus	21.09	17.32
OQU91406	Sorghum	nucleus	22.67	17.25
OQU90003	Sorghum	cytosol	23.37	17.23
OQU84114	Sorghum	mitochondrion	14.24	16.91
OQU83978	Sorghum	mitochondrion	18.8	16.9
OQU81651	Sorghum	cytosol	20.56	16.71
OQU84106	Sorghum	cytosol, endoplasmic reticulum, plastid	23.37	16.52
EES18880	Sorghum	cytosol	21.27	16.33
EES18882	Sorghum	cytosol	20.74	16.1
EES01740	Sorghum	cytosol	22.5	15.86
KXG36217	Sorghum	cytosol	22.67	15.54

Protein Annotations

EnsemblPlants:KXG33821	EnsemblPlantsGene:SORBI_3003G377900	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:Scarecrow-like_1	InterPro:TF_GRAS
PANTHER:PTHR31636	PANTHER:PTHR31636:SF10	PFAM:PF03514	PFscan:PS50985	ProteinID:KXG33820.1	ProteinID:KXG33821
ProteinID:KXG33821.1	SEG:seg	UniParc:UPI0001C809DD	UniProt:A0A1B6Q7E5	MapMan:15.5.12	:

Description

hypothetical protein

Coordinates

chr3:-:69203742..69207932

Molecular Weight (calculated)

63273.5 Da

IEP (calculated)

4.767

GRAVY (calculated)

-0.322

Length

569 amino acids

Sequence
(BLAST)

001: MSFARRLDPS AYTDNLYIHK FATPSSTFAA RRFSSDTQLF RYDPEPYNEY GHMGFTGAPS AAFQNSLCSQ QASLKPYHVT NDGRSPSVAD TQSNSCSDAA
101: KDSPVVSNVS QQNSQSVSDS QSSEIEVEFD EDDIRLKLQE LEHALLDDGD DILFDISQAG SINDEWADPM KNVLLPNSPK ESESSISCAV SNSGAPRTPK
201: QLLFDCATAL SEYNTDEAQA IITELRQMVS IQGDPSQRIA AYLVEGLAAR IVASGNGIYK ALTCKDPPTL YQLSAMQILF EICPCFRLGF MAANYAIVEA
301: CKGEERLHII DFDINQGSQY ITLIQFLKNN ANKPRHLRIT GVDDPETVQR PIGGLRVIGQ RLEKLAEDCG VSFEFRAVGA NIGDVTPAML DCRPGEALVV
401: NFAFQLHHLP DESVSIMNER DQLLRMVKGL HPKLVTLVEQ DANTNTAPFL PRFREVYDYY SALFDSLDAT LPRESPDRMN VERQCLAREI VNILACEGPD
501: RVERYEVAGK WRARMTMAGF IPCAFNSNVI SGIKSTLKSY CDRYKFHEDH GGLHFGWGEK TLIVSSAWQ

Best Arabidopsis Sequence Match ( AT1G21450.1 )
(BLAST)

001: MVEQTVVREH IKARVMSLVR SAEPSSYRNP KLYTLNENGN NNGVSSAQIF DPDRSKNPCL TDDSYPSQSY EKYFLDSPTD EFVQHPIGSG ASVSSFGSLD
101: SFPYQSRPVL GCSMEFQLPL DSTSTSSTRL LGDYQAVSYS PSMDVVEEFD DEQMRSKIQE LERALLGDED DKMVGIDNLM EIDSEWSYQN ESEQHQDSPK
201: ESSSADSNSH VSSKEVVSQA TPKQILISCA RALSEGKLEE ALSMVNELRQ IVSIQGDPSQ RIAAYMVEGL AARMAASGKF IYRALKCKEP PSDERLAAMQ
301: VLFEVCPCFK FGFLAANGAI LEAIKGEEEV HIIDFDINQG NQYMTLIRSI AELPGKRPRL RLTGIDDPES VQRSIGGLRI IGLRLEQLAE DNGVSFKFKA
401: MPSKTSIVSP STLGCKPGET LIVNFAFQLH HMPDESVTTV NQRDELLHMV KSLNPKLVTV VEQDVNTNTS PFFPRFIEAY EYYSAVFESL DMTLPRESQE
501: RMNVERQCLA RDIVNIVACE GEERIERYEA AGKWRARMMM AGFNPKPMSA KVTNNIQNLI KQQYCNKYKL KEEMGELHFC WEEKSLIVAS AWR

Arabidopsis Description

SCL1Scarecrow-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SDQ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.