CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042907_P001	Maize	cytosol	92.19	91.97
Os01t0842200-01	Rice	cytosol	77.94	76.71
HORVU3Hr1G086210.1	Barley	cytosol, nucleus, plasma membrane	72.24	73.7
TraesCS3B01G392600.1	Wheat	cytosol	73.36	72.64
TraesCS3D01G354100.1	Wheat	cytosol, extracellular, nucleus	73.61	72.62
TraesCS3A01G360300.1	Wheat	cytosol, extracellular, nucleus	70.26	71.77
OQU92829	Sorghum	cytosol	42.75	47.0
KXG38103	Sorghum	cytosol	35.56	45.85
KXG21079	Sorghum	cytosol	34.57	44.78
KXG37250	Sorghum	cytosol	36.06	44.7
KXG21080	Sorghum	cytosol	33.83	43.61
EES16206	Sorghum	cytosol	38.29	42.33
OQU84105	Sorghum	cytosol	37.92	41.92
OQU84115	Sorghum	cytosol	25.03	41.48
OQU84111	Sorghum	cytosol	34.2	40.95
KXG29219	Sorghum	cytosol	34.82	40.78
OQU83981	Sorghum	cytosol	24.66	40.04
OQU84112	Sorghum	cytosol	35.32	39.75
OQU84113	Sorghum	cytosol, nucleus, plastid	31.1	39.28
OQU84120	Sorghum	nucleus	30.73	39.12
KXG29223	Sorghum	cytosol	34.08	38.68
OQU90003	Sorghum	cytosol	36.06	37.69
EES09053	Sorghum	cytosol	29.86	37.66
EES18882	Sorghum	cytosol	34.08	37.52
OQU84116	Sorghum	nucleus	28.75	37.48
KXG26392	Sorghum	cytosol	29.37	37.38
OQU91407	Sorghum	nucleus	31.47	37.03
EES18880	Sorghum	cytosol	33.83	36.84
KXG29232	Sorghum	cytosol	30.98	36.76
OQU84114	Sorghum	mitochondrion	21.81	36.74
KXG29228	Sorghum	cytosol	28.0	36.51
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	28.62	36.38
KXG36217	Sorghum	cytosol	37.3	36.27
KXG29224	Sorghum	nucleus	30.73	35.79
OQU83979	Sorghum	plastid	26.77	35.58
OQU83980	Sorghum	cytosol	27.26	35.43
KXG38064	Sorghum	nucleus	31.6	35.42
OQU91406	Sorghum	nucleus	32.34	34.89
EER91260	Sorghum	nucleus	30.86	34.54
OQU83978	Sorghum	mitochondrion	26.77	34.12
OQU84106	Sorghum	cytosol, endoplasmic reticulum, plastid	33.71	33.79
OQU81651	Sorghum	cytosol	28.62	33.0
EER97449	Sorghum	cytosol	17.35	25.59
EER97346	Sorghum	cytosol	16.98	24.04
EER95348	Sorghum	cytosol	15.74	23.69
KXG33821	Sorghum	cytosol	15.86	22.5
EES18257	Sorghum	cytosol	15.61	22.38
EES05727	Sorghum	cytosol	14.13	18.12
EES12703	Sorghum	cytosol, nucleus, plastid	13.51	16.72

Protein Annotations

MapMan:15.5.12	EntrezGene:8058890	UniProt:C5XPP9	EnsemblPlants:EES01740	ProteinID:EES01740	ProteinID:EES01740.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR005202
PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF131	EnsemblPlantsGene:SORBI_3003G352600	unigene:Sbi.1992
InterPro:TF_GRAS	UniParc:UPI0001A8450D	RefSeq:XP_002456620.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:67155376..67158176

Molecular Weight (calculated)

89068.7 Da

IEP (calculated)

6.267

GRAVY (calculated)

-0.349

Length

807 amino acids

Sequence
(BLAST)

001: MVMDAGLHEP CALLPGSKRD GHMPIYPQIA AAANGFTAEE LESLLFLSPD GVASAAGGVG GGSYLNVAPT TVVPPARTDR RASPPPSVAQ PDDSEAFSDI
101: VLGYINRMLM AEDIDDKFEH YPEHPALLAA EKPFLEILTE RPSSSGGSAV DSPDGSSVGN SCYSAGSCTC ATATAASDAF AAVLTPALDF PSAAFLQPPQ
201: LYQDLSPESS VVEAGGAWPY DSTEFYQLQQ SNLLSQSSSF ASSNGSGVTL SDGFESLLSS PGVMPDVGIT DFAVQSQQVM QFCRGLEEAS KFLPDESKLV
301: IDLEKPASVT SLLANIKGEN RFAEVKTEKA DVDAAIHRGK KHFYGDDLDA EEGRCSKHSA PAIDTDHLVR EMMDKVLLCN GEMCSKGVKE LREALQHDVA
401: KNSHGVHGKG SGHGKGRGKK QPKKKEVVDL ETLLVHCAQS VATDDRRGAT ELLKQIRQHA SPNGDGDQRL AHCFANGLEA RLAGNGSQIY KSVIMTRFPC
501: TDVLKAYQLY LAACPFKKIS HFFANQTIMN AVEKAKKVHI VDYGIYYGFQ WPCLIQRLST RRGGPPRLRI TGIDTPQPGF RPAERIEETG RYLKDYAQTF
601: NVPFEFRAIP SRFEAVQIED LHIEKDELLI VNSMFKFKTL MDESVVAESP RNMVLNTIRK MNPHLFIHGI VNGSYNAPFF VSRFREALYH YSAIYDMLET
701: NIPGDNEQRL LIESALFGRE AINVISCEGL ERMERPETYK QWQVRNQRAG FKQLPINQDI MKRAREKVRC YHKDFIIDED NRWLLQGWKG RIILALSTWK
801: PDHKSSS

Best Arabidopsis Sequence Match ( AT2G37650.1 )
(BLAST)

001: MITEPSLTGI SGMVNRNRLS GLPDQPSSHS FTPVTLYDGF NYNLSSDHIN TVVAAPENSV FIREEEEEED PADDFDFSDA VLGYISQMLN EEDMDDKVCM
101: LQESLDLEAA ERSLYEAIGK KYPPSPERNL AFAERNSENL DRVVPGNYTG GDCIGFGNGG IKPLSSGFTL DFRNPQSCSS ILSVPQSNGL ITIYGDGIDE
201: SSKNNRENHQ SVWLFRREIE EANRFNPEEN ELIVNFREEN CVSKARKNSS RDEICVEEER SSKLPAVFGE DILRSDVVDK ILVHVPGGES MKEFNALRDV
301: LKKGVEKKKA SDAQGGKRRA RGRGRGRGRG GGGGQNGKKE VVDLRSLLIH CAQAVAADDR RCAGQLLKQI RLHSTPFGDG NQRLAHCFAN GLEARLAGTG
401: SQIYKGIVSK PRSAAAVLKA HQLFLACCPF RKLSYFITNK TIRDLVGNSQ RVHVIDFGIL YGFQWPTLIH RFSMYGSPKV RITGIEFPQP GFRPAQRVEE
501: TGQRLAAYAK LFGVPFEYKA IAKKWDAIQL EDLDIDRDEI TVVNCLYRAE NLHDESVKVE SCRDTVLNLI GKINPDLFVF GIVNGAYNAP FFVTRFREAL
601: FHFSSIFDML ETIVPREDEE RMFLEMEVFG REALNVIACE GWERVERPET YKQWHVRAMR SGLVQVPFDP SIMKTSLHKV HTFYHKDFVI DQDNRWLLQG
701: WKGRTVMALS VWKPESKA

Arabidopsis Description

SCL9Scarecrow-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80933]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.