Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES01740 | Sorghum | cytosol | 76.71 | 77.94 |
| Zm00001d042907_P001 | Maize | cytosol | 75.73 | 76.76 |
| HORVU3Hr1G086210.1 | Barley | cytosol, nucleus, plasma membrane | 71.34 | 73.96 |
| TraesCS3B01G392600.1 | Wheat | cytosol | 73.41 | 73.86 |
| TraesCS3A01G360300.1 | Wheat | cytosol, extracellular, nucleus | 70.37 | 73.04 |
| TraesCS3D01G354100.1 | Wheat | cytosol, extracellular, nucleus | 72.68 | 72.86 |
| Os04t0590400-01 | Rice | cytosol, nucleus, peroxisome | 37.32 | 48.11 |
| Os03t0690600-03 | Rice | cytosol | 42.8 | 48.02 |
| Os12t0573200-01 | Rice | cytosol, plasma membrane | 39.63 | 44.04 |
| Os11t0705200-01 | Rice | cytosol | 35.85 | 42.49 |
| Os11t0705900-01 | Rice | cytosol | 33.05 | 42.21 |
| Os11t0706200-00 | Rice | nucleus | 29.02 | 40.13 |
| Os11t0139600-01 | Rice | nucleus | 19.88 | 27.96 |
| Os07t0583600-01 | Rice | plasma membrane | 17.93 | 27.02 |
| Os03t0193000-01 | Rice | plastid | 17.32 | 26.54 |
| Os01t0881500-01 | Rice | cytosol | 15.85 | 23.51 |
| Os07t0545800-01 | Rice | cytosol, nucleus | 16.22 | 23.29 |
| Os02t0681900-01 | Rice | cytosol | 13.9 | 18.45 |
| Os04t0580300-01 | Rice | cytosol, nucleus, plastid | 13.78 | 18.26 |
Protein Annotations
| MapMan:15.5.12 | EntrezGene:4327499 | ProteinID:BAD81733.1 | ProteinID:BAF06685.1 | ProteinID:BAS75165.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR005202 | EnsemblPlantsGene:Os01g0842200 |
| EnsemblPlants:Os01t0842200-01 | PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF131 | UniProt:Q5N9X3 |
| InterPro:TF_GRAS | UniParc:UPI000049E871 | RefSeq:XP_015619294.1 | SEG:seg | : | : |
Description
Similar to Scarecrow-like 9 (Fragment). (Os01t0842200-01);Similar to SCARECROW-like protein. (Os01t0842200-02)
Coordinates
chr1:+:36158308..36161507
Molecular Weight (calculated)
90675.9 Da
IEP (calculated)
5.960
GRAVY (calculated)
-0.415
Length
820 amino acids
Sequence
(BLAST)
(BLAST)
001: MVMDAGVHDV CTMLPGSKRD AHLPLPIYPQ IAAANGFATA EEFDPLLFLS PDAVCGGGGG DYLNIVSAQP ISAASTNGAS PPRDVSVSAS AASSAAAQHD
101: DSEAFSDIVL GYINRMLMAE DIDEKFEHYP VNADDLLAAE KPFLEILADQ SPYSGGSSVE SPDGSSAANS CNSLSPCNCS SSSDGLGAVP QTPVLEFPTA
201: AFSQTPQLYG DLIPTGGMVE SGGAWPYDPT EFYQLQTKPV RENLPSQSSS FASSNGSSVT FSEGFESLLS PAGVLPDVSL NDFVVQNQQA LQFRRGFQEA
301: SKFLPDESKL VIDVDKLYSG DEGSRFLGEV RQEKKLVKVK TETSDVESAG HRGKKHFYGD DLDAEEGRCS KHSAQGIDTD HLVRDLMDKV LLCNGETCSK
401: GVKELREALQ HDVAKHSGGG HGKGSSHGKG RGKKQPKKEV VDLETLLIHC AQSVATDDRR SATELLKQIR QHAHANGDGD QRLAHCFANG LEARLAGTGS
501: QIYKNYTITR LPCTDVLKAY QLYLAACPFK KISHYFANQT ILNAVEKAKK VHIVDYGIYY GFQWPCLIQR LSNRPGGPPK LRITGIDTPQ PGFRPAERTE
601: ETGRYLSDYA QTFNVPFEFQ AIASRFEAVR MEDLHIEEDE VLIVNCMFKF KNLMDESVVA ESPRNMALKT IRKMNPHVFI HGVVNGSYNA PFFVTRFREA
701: LFHYSAIFDM LETNIPKDNE QRLLIESALF SREAINVISC EGLERMERPE TYKQWQVRNQ RVGFKQLPLN QDMMKRAREK VRCYHKDFII DEDNRWLLQG
801: WKGRILFALS TWKPDNRSSS
101: DSEAFSDIVL GYINRMLMAE DIDEKFEHYP VNADDLLAAE KPFLEILADQ SPYSGGSSVE SPDGSSAANS CNSLSPCNCS SSSDGLGAVP QTPVLEFPTA
201: AFSQTPQLYG DLIPTGGMVE SGGAWPYDPT EFYQLQTKPV RENLPSQSSS FASSNGSSVT FSEGFESLLS PAGVLPDVSL NDFVVQNQQA LQFRRGFQEA
301: SKFLPDESKL VIDVDKLYSG DEGSRFLGEV RQEKKLVKVK TETSDVESAG HRGKKHFYGD DLDAEEGRCS KHSAQGIDTD HLVRDLMDKV LLCNGETCSK
401: GVKELREALQ HDVAKHSGGG HGKGSSHGKG RGKKQPKKEV VDLETLLIHC AQSVATDDRR SATELLKQIR QHAHANGDGD QRLAHCFANG LEARLAGTGS
501: QIYKNYTITR LPCTDVLKAY QLYLAACPFK KISHYFANQT ILNAVEKAKK VHIVDYGIYY GFQWPCLIQR LSNRPGGPPK LRITGIDTPQ PGFRPAERTE
601: ETGRYLSDYA QTFNVPFEFQ AIASRFEAVR MEDLHIEEDE VLIVNCMFKF KNLMDESVVA ESPRNMALKT IRKMNPHVFI HGVVNGSYNA PFFVTRFREA
701: LFHYSAIFDM LETNIPKDNE QRLLIESALF SREAINVISC EGLERMERPE TYKQWQVRNQ RVGFKQLPLN QDMMKRAREK VRCYHKDFII DEDNRWLLQG
801: WKGRILFALS TWKPDNRSSS
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.