Factsheet for Os04t0590400-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G113620.1	Barley	cytosol, nucleus, peroxisome	68.55	67.7
TraesCS5D01G494900.1	Wheat	cytosol	69.5	67.28
TraesCS5B01G494500.1	Wheat	cytosol	69.18	66.97
TraesCS5A01G481300.1	Wheat	cytosol	68.87	66.87
Zm00001d034664_P001	Maize	plastid	58.49	66.55
KXG37250	Sorghum	cytosol	66.98	65.44
Solyc04g011630.1.1	Tomato	cytosol	16.35	61.18
CDX68389	Canola	cytosol	7.23	54.12
VIT_06s0004g04990.t01	Wine grape	cytosol	36.16	52.04
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	25.31	50.79
CDX80265	Canola	endoplasmic reticulum, golgi	25.0	50.16
PGSC0003DMT400005480	Potato	cytosol	36.01	47.02
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	49.84	44.71
PGSC0003DMT400049420	Potato	cytosol	43.87	42.02
KRH10240	Soybean	cytosol	39.78	41.75
KRH24780	Soybean	cytosol	43.24	41.67
KRH65839	Soybean	cytosol, plastid	47.8	41.64
Bra015584.1-P	Field mustard	cytosol	28.46	41.51
KRH29771	Soybean	cytosol	44.34	41.47
VIT_13s0019g01780.t01	Wine grape	nucleus	38.84	41.17
AT3G46600.1	Thale cress	cytosol	37.58	40.99
KRH29773	Soybean	cytosol	39.47	40.88
Os03t0690600-03	Rice	cytosol	46.86	40.77
KRH24773	Soybean	nucleus	44.03	40.76
VIT_13s0019g01810.t01	Wine grape	cytosol	47.64	40.51
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	40.72	40.09
Bra033813.1-P	Field mustard	nucleus	36.64	40.03
PGSC0003DMT400016258	Potato	cytosol	45.75	39.97
VIT_06s0004g04970.t01	Wine grape	cytosol	41.35	39.97
CDY71578	Canola	nucleus, plastid	32.7	39.92
Solyc06g082530.1.1	Tomato	cytosol	40.88	39.82
CDY47877	Canola	nucleus	38.68	39.81
VIT_06s0004g04980.t01	Wine grape	nucleus	44.03	39.77
CDY39530	Canola	cytosol	38.68	39.74
Os11t0705900-01	Rice	cytosol	40.09	39.72
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	39.31	39.68
KRH29774	Soybean	cytosol	39.31	39.62
PGSC0003DMT400022997	Potato	cytosol, plastid	47.33	39.55
Bra028391.1-P	Field mustard	nucleus	38.52	39.52
KRH23095	Soybean	cytosol	40.72	39.42
KRG99969	Soybean	cytosol	45.6	39.35
Solyc10g086530.1.1	Tomato	cytosol	47.01	39.29
PGSC0003DMT400078286	Potato	nucleus	41.2	39.28
Os11t0705200-01	Rice	cytosol	42.61	39.16
Solyc09g010920.1.1	Tomato	cytosol	46.86	39.16
KRH49113	Soybean	cytosol	45.13	39.1
CDX86475	Canola	nucleus	43.55	39.01
CDY33040	Canola	nucleus	36.48	38.86
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	41.04	38.78
CDX82987	Canola	nucleus	36.64	38.77
Solyc01g100200.2.1	Tomato	nucleus	40.57	38.74
CDX79750	Canola	peroxisome	41.04	38.72
KRH24775	Soybean	cytosol	41.35	38.68
CDY07777	Canola	cytosol, nucleus, peroxisome	40.88	38.63
KRH29775	Soybean	nucleus	40.88	38.63
Os12t0573200-01	Rice	cytosol, plasma membrane	44.65	38.48
VIT_13s0019g01700.t01	Wine grape	cytosol	45.91	38.42
KRH29779	Soybean	cytosol	44.81	38.41
Solyc06g076280.1.1	Tomato	cytosol	45.13	38.37
AT5G59450.1	Thale cress	nucleus	36.79	38.36
KRH23094	Soybean	cytosol	33.33	38.34
CDY06266	Canola	cytosol	37.74	37.97
VIT_13s0019g01710.t01	Wine grape	cytosol	43.4	37.96
VIT_06s0004g04950.t01	Wine grape	cytosol	44.97	37.93
PGSC0003DMT400077972	Potato	cytosol	44.81	37.9
AT2G37650.1	Thale cress	cytosol	42.77	37.88
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	44.18	37.82
VIT_13s0019g01790.t01	Wine grape	cytosol	42.61	37.69
Os11t0706200-00	Rice	nucleus	34.91	37.44
Os01t0842200-01	Rice	cytosol	48.11	37.32
KRH24778	Soybean	nucleus	39.62	37.28
KRH10241	Soybean	cytosol, nucleus, peroxisome	40.09	37.06
Bra030688.1-P	Field mustard	nucleus	43.24	37.01
CDY15616	Canola	nucleus	41.51	36.92
PGSC0003DMT400069949	Potato	cytosol	42.92	36.55
Solyc05g053090.1.1	Tomato	cytosol	42.61	36.47
Bra031581.1-P	Field mustard	cytosol	38.21	36.38
CDY47878	Canola	nucleus	39.47	36.32
AT2G29060.1	Thale cress	cytosol	39.62	36.31
CDX77228	Canola	cytosol	38.36	36.31
KRH10243	Soybean	nucleus	37.89	36.24
KRH23090	Soybean	vacuole	35.22	36.07
KRH23089	Soybean	cytosol	36.32	35.87
AT1G07520.3	Thale cress	cytosol	39.15	35.78
Bra028390.1-P	Field mustard	cytosol	39.47	35.55
CDX68388	Canola	cytosol	23.11	35.51
AT1G07530.1	Thale cress	cytosol	42.77	35.37
Bra035653.1-P	Field mustard	cytosol	40.09	35.32
CDY31749	Canola	cytosol	40.25	35.26
CDY06265	Canola	cytosol	38.21	35.22
Bra031580.1-P	Field mustard	cytosol	38.05	35.07
CDY09912	Canola	cytosol	38.36	34.86
VIT_06s0004g04960.t01	Wine grape	nucleus	43.4	34.63
CDY09911	Canola	nucleus	30.19	32.88
Os11t0139600-01	Rice	nucleus	23.74	25.9
Os03t0193000-01	Rice	plastid	20.6	24.49
Os07t0583600-01	Rice	plasma membrane	20.91	24.45
Os01t0881500-01	Rice	cytosol	19.03	21.88
Os07t0545800-01	Rice	cytosol, nucleus	19.34	21.54
Os02t0681900-01	Rice	cytosol	17.14	17.64
Os04t0580300-01	Rice	cytosol, nucleus, plastid	15.72	16.16

Protein Annotations

MapMan:15.5.12	EntrezGene:4336820	ProteinID:BAF15620.1	ProteinID:BAS90746.1	ProteinID:CAE04870.2	ProteinID:EAZ31812.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR005202
EnsemblPlantsGene:Os04g0590400	EnsemblPlants:Os04t0590400-01	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF23
UniProt:Q7XLZ1	InterPro:TF_GRAS	UniParc:UPI00001B19EC	RefSeq:XP_015637021.1	SEG:seg	:

Description

GRAS transcription factor 23GRAS transcription factor, Drought stress response (Os04t0590400-01)

Coordinates

chr4:+:29857572..29860316

Molecular Weight (calculated)

71659.7 Da

IEP (calculated)

5.466

GRAVY (calculated)

-0.424

Length

636 amino acids

Sequence
(BLAST)

001: MLDSGSYDDV DYGDLFSIPN PPAPHLLNFP LQFFPSNGFI SSADDSHRSP AGMFGSTPSP TSTTTELENS EDLSESADDA VLAYINQFLL EDEEDESCPG
101: TITSVEDSAL LAVEKPFVDI LTASQEACQE NSWIDSCCDF TGNGGLLDTF TTTHAACQPA PCEFEKEKGE CAVHKGRKNP HDDCLLFEEE SRRSKQLAVS
201: EEETVREMFD KVLLCNGECE LRAPLPAEAR NCGVYVKGSG NKRGRKKGKS GASAEDDAVD LTTLLIHCAQ AAAIDDHRNS NELLKQIRQR SSAYGDAGQR
301: LAHCFANALE ARLAGTGSNI YRSLAAKRTS VYDILNAFKL YVTACPFKKI SNFFSIEAIL NASKGMTRLH IVDYGIQYGF QWPIFFQRIS KRPGGPPSVR
401: ITGVDLPQPG FRPAQLIEAT GRRLHDYARM FNVPFEYHAI AAKWDTIRVE DLKIDKDKDE LLVVNCLFRM RNMMDEMVTD DSPRMQVLKT IRKMNPNLFI
501: HGVVNGTYNA PFFVTRFKEA LFYYSSLFDM LETTASRVDE NRLLIERDLF GREALNVVAC EGTERVERPE TYKQWQVRNI RAGFKQLPLN QETVKKARYK
601: VKKSYHRDFL VDEDNKWMLQ GWKGRIIFAL SAWEPN

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.