Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G494500.1 | Wheat | cytosol | 95.42 | 95.13 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 95.42 | 95.13 |
| HORVU5Hr1G113620.1 | Barley | cytosol, nucleus, peroxisome | 90.23 | 91.77 |
| Os04t0590400-01 | Rice | cytosol, nucleus, peroxisome | 66.87 | 68.87 |
| Zm00001d034664_P001 | Maize | plastid | 54.2 | 63.51 |
| KXG37250 | Sorghum | cytosol | 61.37 | 61.75 |
| Solyc04g011630.1.1 | Tomato | cytosol | 15.27 | 58.82 |
| CDX68389 | Canola | cytosol | 7.48 | 57.65 |
| VIT_06s0004g04990.t01 | Wine grape | cytosol | 34.35 | 50.91 |
| Bra002564.1-P | Field mustard | endoplasmic reticulum, golgi | 23.82 | 49.21 |
| CDX80265 | Canola | endoplasmic reticulum, golgi | 23.51 | 48.58 |
| TraesCS5A01G505900.1 | Wheat | cytosol | 28.55 | 46.17 |
| TraesCS4A01G176400.1 | Wheat | cytosol | 34.5 | 45.38 |
| PGSC0003DMT400005480 | Potato | cytosol | 33.44 | 44.97 |
| VIT_08s0007g00510.t01 | Wine grape | cytosol, plastid | 46.26 | 42.74 |
| PGSC0003DMT400049420 | Potato | cytosol | 42.44 | 41.87 |
| PGSC0003DMT400063769 | Potato | cytosol, nucleus, peroxisome | 40.0 | 40.56 |
| KRH10240 | Soybean | cytosol | 37.1 | 40.1 |
| KRH65839 | Soybean | cytosol, plastid | 44.58 | 40.0 |
| KRH29773 | Soybean | cytosol | 37.4 | 39.9 |
| AT3G46600.1 | Thale cress | cytosol | 35.42 | 39.79 |
| KRH24780 | Soybean | cytosol | 40.0 | 39.7 |
| PGSC0003DMT400022997 | Potato | cytosol, plastid | 46.11 | 39.68 |
| VIT_13s0019g01780.t01 | Wine grape | nucleus | 36.34 | 39.67 |
| Solyc09g010920.1.1 | Tomato | cytosol | 45.65 | 39.29 |
| Solyc01g100200.2.1 | Tomato | nucleus | 39.85 | 39.19 |
| CDY71578 | Canola | nucleus, plastid | 31.14 | 39.16 |
| KRH29771 | Soybean | cytosol | 40.61 | 39.12 |
| VIT_13s0019g01810.t01 | Wine grape | cytosol | 44.58 | 39.04 |
| Solyc10g086530.1.1 | Tomato | cytosol | 45.34 | 39.03 |
| KRH24773 | Soybean | nucleus | 40.92 | 39.01 |
| Bra033813.1-P | Field mustard | nucleus | 34.66 | 39.0 |
| Bra015584.1-P | Field mustard | cytosol | 25.95 | 38.99 |
| VIT_06s0004g04980.t01 | Wine grape | nucleus | 41.83 | 38.92 |
| VIT_06s0004g04970.t01 | Wine grape | cytosol | 39.08 | 38.91 |
| Solyc06g082530.1.1 | Tomato | cytosol | 38.63 | 38.74 |
| KRG99969 | Soybean | cytosol | 43.51 | 38.67 |
| Bra000012.1-P | Field mustard | cytosol, nucleus, peroxisome | 39.69 | 38.63 |
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 39.69 | 38.63 |
| CDX79750 | Canola | peroxisome | 39.69 | 38.58 |
| KRH49113 | Soybean | cytosol | 43.05 | 38.42 |
| PGSC0003DMT400078286 | Potato | nucleus | 39.08 | 38.38 |
| AT2G29065.1 | Thale cress | cytosol, nucleus, plastid | 36.79 | 38.25 |
| PGSC0003DMT400016258 | Potato | cytosol | 42.44 | 38.19 |
| CDY47877 | Canola | nucleus | 35.88 | 38.03 |
| CDY39530 | Canola | cytosol | 35.88 | 37.96 |
| CDX82987 | Canola | nucleus | 34.81 | 37.94 |
| Bra028391.1-P | Field mustard | nucleus | 35.88 | 37.9 |
| KRH23095 | Soybean | cytosol | 38.02 | 37.9 |
| AT2G37650.1 | Thale cress | cytosol | 41.53 | 37.88 |
| KRH24775 | Soybean | cytosol | 39.08 | 37.65 |
| KRH23094 | Soybean | cytosol | 31.76 | 37.61 |
| CDX86475 | Canola | nucleus | 40.76 | 37.61 |
| KRH29774 | Soybean | cytosol | 36.18 | 37.56 |
| AT5G59450.1 | Thale cress | nucleus | 34.96 | 37.54 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 44.43 | 37.5 |
| TraesCS4A01G176600.1 | Wheat | cytosol | 37.1 | 37.44 |
| VIT_13s0019g01710.t01 | Wine grape | cytosol | 41.53 | 37.41 |
| VIT_13s0019g01700.t01 | Wine grape | cytosol | 43.36 | 37.37 |
| CDY33040 | Canola | nucleus | 34.05 | 37.35 |
| TraesCS4A01G176300.1 | Wheat | cytosol | 38.32 | 37.19 |
| KRH29775 | Soybean | nucleus | 38.02 | 37.0 |
| TraesCS5A01G080300.1 | Wheat | cytosol | 41.83 | 36.83 |
| VIT_06s0004g04950.t01 | Wine grape | cytosol | 42.29 | 36.74 |
| Solyc06g076280.1.1 | Tomato | cytosol | 41.68 | 36.5 |
| PGSC0003DMT400077972 | Potato | cytosol | 41.68 | 36.3 |
| VIT_13s0019g01790.t01 | Wine grape | cytosol | 39.85 | 36.3 |
| KRH29779 | Soybean | cytosol | 41.07 | 36.25 |
| TraesCS5A01G506100.1 | Wheat | cytosol | 35.57 | 36.24 |
| CDY06266 | Canola | cytosol | 34.96 | 36.23 |
| Solyc05g053090.1.1 | Tomato | cytosol | 41.07 | 36.2 |
| TraesCS5A01G506000.1 | Wheat | cytosol | 33.28 | 36.09 |
| PGSC0003DMT400069949 | Potato | cytosol | 41.07 | 36.01 |
| Bra030688.1-P | Field mustard | nucleus | 40.46 | 35.67 |
| TraesCS3A01G360300.1 | Wheat | cytosol, extracellular, nucleus | 42.9 | 35.57 |
| KRH10243 | Soybean | nucleus | 35.88 | 35.34 |
| KRH23090 | Soybean | vacuole | 33.44 | 35.27 |
| KRH23089 | Soybean | cytosol | 34.66 | 35.25 |
| CDY15616 | Canola | nucleus | 38.47 | 35.24 |
| CDX77228 | Canola | cytosol | 36.03 | 35.12 |
| KRH24778 | Soybean | nucleus | 36.18 | 35.06 |
| Bra031581.1-P | Field mustard | cytosol | 35.73 | 35.03 |
| TraesCS7A01G173000.1 | Wheat | cytosol | 40.0 | 35.03 |
| CDY47878 | Canola | nucleus | 36.95 | 35.02 |
| AT2G29060.1 | Thale cress | cytosol | 37.1 | 35.01 |
| TraesCS4A01G176500.1 | Wheat | cytosol | 26.41 | 34.74 |
| KRH23091 | Soybean | endoplasmic reticulum, plasma membrane | 39.39 | 34.72 |
| TraesCS4A01G177100.1 | Wheat | nucleus | 34.05 | 34.68 |
| CDX68388 | Canola | cytosol | 21.83 | 34.54 |
| AT1G07520.3 | Thale cress | cytosol | 36.49 | 34.34 |
| KRH10241 | Soybean | cytosol, nucleus, peroxisome | 36.03 | 34.3 |
| Bra028390.1-P | Field mustard | cytosol | 36.95 | 34.28 |
| TraesCS4A01G176700.1 | Wheat | cytosol | 34.81 | 34.18 |
| Bra035653.1-P | Field mustard | cytosol | 37.4 | 33.93 |
| CDY06265 | Canola | cytosol | 35.73 | 33.91 |
| CDY31749 | Canola | cytosol | 37.56 | 33.88 |
| AT1G07530.1 | Thale cress | cytosol | 39.69 | 33.81 |
| Bra031580.1-P | Field mustard | cytosol | 35.57 | 33.77 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 36.34 | 33.71 |
| CDY09912 | Canola | cytosol | 35.88 | 33.57 |
| VIT_06s0004g04960.t01 | Wine grape | nucleus | 40.15 | 33.0 |
| TraesCS4A01G176200.1 | Wheat | peroxisome | 40.31 | 32.92 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 36.03 | 32.73 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 36.03 | 32.69 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 35.27 | 32.26 |
| CDY09911 | Canola | nucleus | 28.24 | 31.68 |
| TraesCS5A01G414000.1 | Wheat | cytosol | 19.24 | 29.58 |
| TraesCS5A01G409800.1 | Wheat | nucleus, plastid | 19.39 | 25.35 |
| TraesCS2A01G189600.1 | Wheat | cytosol | 20.31 | 24.01 |
| TraesCS4A01G039000.1 | Wheat | nucleus | 17.4 | 23.31 |
| TraesCS2A01G214400.1 | Wheat | cytosol | 18.32 | 21.05 |
| TraesCS3A01G408000.1 | Wheat | cytosol | 17.71 | 21.01 |
| TraesCS2A01G395400.1 | Wheat | cytosol, mitochondrion, nucleus | 16.49 | 17.12 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G481300.1 | EnsemblPlantsGene:TraesCS5A01G481300 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF23 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr5A:+:653848063..653850030
Molecular Weight (calculated)
73540.2 Da
IEP (calculated)
6.515
GRAVY (calculated)
-0.417
Length
655 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSCEDLGYG DVYSVPNPAA APAYALDFSL HHQQQQQLRF PPSSYGFHGL PAASAAYYQP SPPQSALIGS TPSPVSTTTE LGSPEEASDD AVLAYINQFL
101: LEDDDDDEFF APASEPARDS ALLAVAKPFV DIIADAKPAA ATVYQDRSWM DPCCAFATMG GGSPDMFVSS RQSSCQLVPC DSVKEEEECA VHKGRKNRHG
201: DDDLEPEDER RRKQLALSEE ETVREMFDKV LLCSGVNCIL QSPLPAEAEI SSVYVKGSGN RRGRKKGKTG VPTVEEESVD LTTLLIHCAQ AAAIDDHRGS
301: GELLKQIRRH SSPHGDAGQR LAHYIANGLE ARLAGTGSTV YRSLVARRTS SADMLKIFKL YGTACPFIRM SRFYSNEAIL DAAAKGVTSV HIVDYGIDWG
401: FQWPIFLQRI SKRDGGPPRI RITAIDLPQP GFRPAERLEA TGRRLRDYAK MFDVPFEYRA IAAKWDAIRV EDLRIDKDDL LIVNCLFRMR HMMDETVADE
501: SPRKTVLNTI RKMNPHRFIH AVVNGTYNAP FFVTRFKEAL FYFSSLYDML EATAPPVDEH RQLIEREYFG RELLNVVACE GTERVERPET YKQWQVRNLR
601: AGFRQVPLLQ ETVKKARYKV IKSYHRDFFV DEDNKWMLQG WKGRVIGALS TWKPS
101: LEDDDDDEFF APASEPARDS ALLAVAKPFV DIIADAKPAA ATVYQDRSWM DPCCAFATMG GGSPDMFVSS RQSSCQLVPC DSVKEEEECA VHKGRKNRHG
201: DDDLEPEDER RRKQLALSEE ETVREMFDKV LLCSGVNCIL QSPLPAEAEI SSVYVKGSGN RRGRKKGKTG VPTVEEESVD LTTLLIHCAQ AAAIDDHRGS
301: GELLKQIRRH SSPHGDAGQR LAHYIANGLE ARLAGTGSTV YRSLVARRTS SADMLKIFKL YGTACPFIRM SRFYSNEAIL DAAAKGVTSV HIVDYGIDWG
401: FQWPIFLQRI SKRDGGPPRI RITAIDLPQP GFRPAERLEA TGRRLRDYAK MFDVPFEYRA IAAKWDAIRV EDLRIDKDDL LIVNCLFRMR HMMDETVADE
501: SPRKTVLNTI RKMNPHRFIH AVVNGTYNAP FFVTRFKEAL FYFSSLYDML EATAPPVDEH RQLIEREYFG RELLNVVACE GTERVERPET YKQWQVRNLR
601: AGFRQVPLLQ ETVKKARYKV IKSYHRDFFV DEDNKWMLQG WKGRVIGALS TWKPS
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.