Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G135900.1 | Wheat | cytosol | 89.21 | 93.26 |
| HORVU4Hr1G027480.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 87.71 | 82.74 |
| TraesCS5A01G506000.1 | Wheat | cytosol | 73.46 | 81.13 |
| TraesCS5A01G506100.1 | Wheat | cytosol | 76.91 | 79.78 |
| TraesCS4A01G177100.1 | Wheat | nucleus | 59.82 | 62.05 |
| OQU84120 | Sorghum | nucleus | 49.92 | 52.52 |
| TraesCS4A01G176400.1 | Wheat | cytosol | 38.83 | 52.01 |
| Zm00001d003553_P001 | Maize | cytosol | 46.93 | 51.57 |
| TraesCS5A01G505900.1 | Wheat | cytosol | 30.88 | 50.86 |
| KXG26392 | Sorghum | cytosol | 47.38 | 49.84 |
| Zm00001d048600_P001 | Maize | nucleus | 47.23 | 48.84 |
| KXG29232 | Sorghum | cytosol | 49.33 | 48.38 |
| TraesCS4A01G176300.1 | Wheat | cytosol | 47.08 | 46.52 |
| TraesCS4A01G176600.1 | Wheat | cytosol | 44.68 | 45.92 |
| TraesCS4A01G176500.1 | Wheat | cytosol | 32.53 | 43.57 |
| TraesCS7A01G173000.1 | Wheat | cytosol | 47.83 | 42.65 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 27.44 | 40.76 |
| TraesCS5A01G080300.1 | Wheat | cytosol | 44.98 | 40.32 |
| TraesCS4A01G176200.1 | Wheat | peroxisome | 47.53 | 39.53 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 34.18 | 34.81 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 38.98 | 33.51 |
| TraesCS5A01G414000.1 | Wheat | cytosol | 20.99 | 32.86 |
| TraesCS3A01G360300.1 | Wheat | cytosol, extracellular, nucleus | 37.93 | 32.03 |
| TraesCS5A01G409800.1 | Wheat | nucleus, plastid | 22.04 | 29.34 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 31.03 | 28.71 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 29.69 | 28.05 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 29.69 | 27.65 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 29.84 | 27.56 |
| TraesCS2A01G189600.1 | Wheat | cytosol | 22.79 | 27.44 |
| TraesCS4A01G039000.1 | Wheat | nucleus | 18.14 | 24.74 |
| TraesCS2A01G214400.1 | Wheat | cytosol | 20.09 | 23.51 |
| TraesCS3A01G408000.1 | Wheat | cytosol | 19.19 | 23.19 |
| TraesCS2A01G395400.1 | Wheat | cytosol, mitochondrion, nucleus | 17.69 | 18.7 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G176700.1 | EnsemblPlantsGene:TraesCS4A01G176700 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF27 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr4A:+:448106295..448108298
Molecular Weight (calculated)
74900.9 Da
IEP (calculated)
6.353
GRAVY (calculated)
-0.280
Length
667 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVIYPLQIQ YSFTAPSEIS MHSTMAATPE ELLGLAEPAP LSPSVFLDLP PTPMTHDDSQ QPQNDLALEY ISRMLTEEDI VDKFFYQYPD HPELLQAEQP
101: FAEILANTSS DAHESFASST SILMPSQGNG TDFMVSRCQV QYPAFFLNGT GIAEASGLVF PIPSESSTRT DMLSSMAFFK GMEEANRFLP ADNVMVAGRG
201: RKKRPGMDGE VEAGLGRSSK QITVLPRCVQ EEEEATALEM LDRLVLNGYD AHPGEMQEVV RVTLEDKENK SAIGRRGRRG ARHTVVTDLE TLLIRCAEAV
301: SSNDVHGASK LLERIKWHSS PTGDAKQRLA HYFAQGLEAR LAGTGSRLYR ALMEKHTLTV GLIKAFHLHM AACCSMKVGL LFAINTICKA VAGRRKLHIV
401: HYGITTGFQW PDLLRLLANR EGGPPQVRIT GINTPRPGLR PAQIMEEAGD RLGNCAKQFG VPFEFRAVAS KPEDVRAEDL HIDPDEVLVV NSMYEFRTLM
501: DESLTFDMVS PRDMVLNNIS KMRPAVFVQS LVNGPYSAAF FMTRFRHALY YFTALFDVME NTVPRDNDQR LLVERDMLAR SAINMIACEG ADRVERPQNY
601: KEWQARNERA GLRQLPLDPD VVLMLKDQVK SRYHKHFMIS EDHRWLLQGW KGRVLYAHST WASQVID
101: FAEILANTSS DAHESFASST SILMPSQGNG TDFMVSRCQV QYPAFFLNGT GIAEASGLVF PIPSESSTRT DMLSSMAFFK GMEEANRFLP ADNVMVAGRG
201: RKKRPGMDGE VEAGLGRSSK QITVLPRCVQ EEEEATALEM LDRLVLNGYD AHPGEMQEVV RVTLEDKENK SAIGRRGRRG ARHTVVTDLE TLLIRCAEAV
301: SSNDVHGASK LLERIKWHSS PTGDAKQRLA HYFAQGLEAR LAGTGSRLYR ALMEKHTLTV GLIKAFHLHM AACCSMKVGL LFAINTICKA VAGRRKLHIV
401: HYGITTGFQW PDLLRLLANR EGGPPQVRIT GINTPRPGLR PAQIMEEAGD RLGNCAKQFG VPFEFRAVAS KPEDVRAEDL HIDPDEVLVV NSMYEFRTLM
501: DESLTFDMVS PRDMVLNNIS KMRPAVFVQS LVNGPYSAAF FMTRFRHALY YFTALFDVME NTVPRDNDQR LLVERDMLAR SAINMIACEG ADRVERPQNY
601: KEWQARNERA GLRQLPLDPD VVLMLKDQVK SRYHKHFMIS EDHRWLLQGW KGRVLYAHST WASQVID
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.