Factsheet for GSMUA_Achr5P08320_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	53.45	54.3
GSMUA_Achr8P02550_001	Banana	nucleus	46.33	53.06
GSMUA_Achr7P15080_001	Banana	cytosol	55.01	41.3
GSMUA_Achr6P34090_001	Banana	nucleus	53.67	39.38
Zm00001d030744_P001	Maize	cytosol	40.53	36.99
GSMUA_Achr10P...	Banana	cytosol	46.99	35.23
TraesCS4A01G176400.1	Wheat	cytosol	38.75	34.94
TraesCS5A01G505900.1	Wheat	cytosol	31.4	34.81
GSMUA_AchrUn_...	Banana	cytosol	50.78	34.6
TraesCS5D01G092000.1	Wheat	cytosol	47.22	34.42
OQU84115	Sorghum	cytosol	36.53	33.68
TraesCS4B01G141100.1	Wheat	cytosol	46.33	33.07
TraesCS4D01G136000.1	Wheat	cytosol	46.77	32.36
TraesCS4A01G176600.1	Wheat	cytosol	46.33	32.05
TraesCS4B01G140800.1	Wheat	cytosol	41.87	31.81
HORVU4Hr1G027520.2	Barley	cytosol, peroxisome	45.66	31.39
TraesCS4B01G141200.1	Wheat	cytosol	39.64	31.39
TraesCS4B01G336200.1	Wheat	cytosol	40.53	31.16
Os11t0705900-01	Rice	cytosol	44.54	31.15
Os12t0573200-01	Rice	cytosol, plasma membrane	50.78	30.89
Zm00001d048588_P001	Maize	cytosol	43.43	30.76
Zm00001d041536_P001	Maize	cytosol	48.55	30.7
OQU84111	Sorghum	cytosol	45.88	30.56
TraesCS5A01G080300.1	Wheat	cytosol	50.56	30.51
Os11t0705200-01	Rice	cytosol	46.99	30.49
TraesCS4D01G136100.1	Wheat	cytosol	39.64	30.48
KXG29219	Sorghum	cytosol	46.77	30.48
HORVU5Hr1G020900.1	Barley	cytosol	50.56	30.47
TraesCS4A01G177100.1	Wheat	nucleus	43.21	30.17
EES16206	Sorghum	cytosol	49.0	30.14
TraesCS7D01G174100.1	Wheat	cytosol	46.33	29.63
Zm00001d048601_P001	Maize	cytosol	42.32	29.59
OQU84105	Sorghum	cytosol	48.11	29.59
TraesCS4D01G135500.1	Wheat	cytosol	42.54	29.57
TraesCS4B01G141400.1	Wheat	cytosol	43.43	29.5
Zm00001d048600_P001	Maize	nucleus	42.09	29.3
TraesCS4D01G136200.1	Wheat	cytosol	39.64	29.28
TraesCS7D01G174300.1	Wheat	cytosol	47.44	29.22
Os11t0706200-00	Rice	nucleus	38.53	29.17
TraesCS4D01G135900.1	Wheat	cytosol	41.43	29.15
TraesCS5A01G506000.1	Wheat	cytosol	39.2	29.14
HORVU4Hr1G027900.1	Barley	cytosol	42.76	29.0
OQU84113	Sorghum	cytosol, nucleus, plastid	41.2	28.95
OQU84112	Sorghum	cytosol	46.1	28.87
OQU84120	Sorghum	nucleus	40.76	28.86
TraesCS7B01G077800.1	Wheat	cytosol	47.22	28.84
TraesCS4B01G141300.1	Wheat	cytosol	43.21	28.78
TraesCS4D01G136300.1	Wheat	cytosol	43.21	28.78
TraesCS4A01G176300.1	Wheat	cytosol	43.21	28.74
HORVU4Hr1G080460.5	Barley	cytosol	37.19	28.69
KXG29223	Sorghum	cytosol	45.43	28.69
HORVU4Hr1G027610.1	Barley	cytosol	43.21	28.66
TraesCS7A01G173000.1	Wheat	cytosol	47.66	28.61
EES09053	Sorghum	cytosol	40.76	28.59
TraesCS7B01G078300.1	Wheat	cytosol	46.99	28.59
OQU84114	Sorghum	mitochondrion	30.29	28.39
TraesCS5A01G506100.1	Wheat	cytosol	40.53	28.3
Zm00001d003553_P001	Maize	cytosol	38.08	28.17
KXG26392	Sorghum	cytosol	39.64	28.08
OQU90003	Sorghum	cytosol	47.66	27.72
KXG29232	Sorghum	cytosol	41.87	27.65
Zm00001d048602_P001	Maize	cytosol	40.98	27.63
KXG29228	Sorghum	cytosol	38.08	27.63
OQU83981	Sorghum	cytosol	30.51	27.57
TraesCS4A01G176700.1	Wheat	cytosol	40.76	27.44
TraesCS4D01G136400.1	Wheat	mitochondrion	43.43	27.39
Zm00001d048604_P001	Maize	cytosol	46.33	27.19
OQU84116	Sorghum	nucleus	37.19	26.98
TraesCS4A01G176500.1	Wheat	cytosol	29.62	26.71
Zm00001d007248_P001	Maize	cytosol, endoplasmic reticulum, nucleus	32.07	26.62
KXG29224	Sorghum	nucleus	40.76	26.41
TraesCS4D01G332000.1	Wheat	cytosol	39.64	26.37
Zm00001d048681_P001	Maize	cytosol	33.41	26.36
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	37.19	26.3
Zm00001d048682_P001	Maize	nucleus	36.75	26.23
OQU83978	Sorghum	mitochondrion	36.75	26.07
HORVU4Hr1G027480.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	40.98	26.03
OQU83979	Sorghum	plastid	34.97	25.86
TraesCS4D01G136500.1	Wheat	peroxisome	43.88	25.68
OQU83980	Sorghum	cytosol	35.19	25.44
Zm00001d007713_P001	Maize	cytosol	33.41	25.04
HORVU4Hr1G027920.1	Barley	peroxisome	44.1	24.97
KXG36217	Sorghum	cytosol	46.1	24.94
OQU81651	Sorghum	cytosol	38.75	24.86
TraesCS4B01G141500.1	Wheat	peroxisome	44.54	24.78
OQU84106	Sorghum	cytosol, endoplasmic reticulum, plastid	44.1	24.6
TraesCS4A01G176200.1	Wheat	peroxisome	43.88	24.56
Os11t0139600-01	Rice	nucleus	29.18	22.47
GSMUA_Achr8P03610_001	Banana	cytosol	7.13	22.22
GSMUA_Achr4P07010_001	Banana	cytosol	16.04	21.95
GSMUA_Achr6P11780_001	Banana	cytosol	16.48	21.64
GSMUA_Achr4P11050_001	Banana	nucleus	18.04	20.4
GSMUA_AchrUn_...	Banana	nucleus	17.82	18.69
GSMUA_Achr6P24310_001	Banana	cytosol	21.6	18.13
GSMUA_Achr10P...	Banana	cytosol	20.49	16.67
GSMUA_Achr3P02410_001	Banana	nucleus	21.38	16.35
GSMUA_Achr4P26400_001	Banana	cytosol, mitochondrion, plastid	19.38	14.9
GSMUA_Achr1P03650_001	Banana	mitochondrion	18.49	14.56
Zm00001d048603_P001	Maize	cytosol	45.88	14.48
GSMUA_Achr5P12810_001	Banana	cytosol, plastid	18.04	14.41
GSMUA_AchrUn_...	Banana	plastid	18.26	14.02
GSMUA_Achr9P18770_001	Banana	cytosol	17.37	13.71
GSMUA_Achr9P12070_001	Banana	mitochondrion, plastid	15.81	13.65
GSMUA_Achr4P24960_001	Banana	cytosol	13.59	12.58
GSMUA_Achr9P24710_001	Banana	endoplasmic reticulum, plastid	14.48	11.15

Protein Annotations

EnsemblPlants:GSMUA_Achr5P08320_001	EnsemblPlants:GSMUA_Achr5T08320_001	EnsemblPlantsGene:GSMUA_Achr5G08320_001	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS
PANTHER:PTHR31636	PANTHER:PTHR31636:SF44	PFAM:PF03514	PFscan:PS50985	UniParc:UPI000294ACD5	UniProt:M0SWR1
MapMan:15.5.12	:	:	:	:	:

Description

Putative Scarecrow-like protein 9 [Source:GMGC_GENE;Acc:GSMUA_Achr5G08320_001]

Coordinates

chr5:-:6060169..6062778

Molecular Weight (calculated)

50938.3 Da

IEP (calculated)

5.400

GRAVY (calculated)

-0.538

Length

449 amino acids

Sequence
(BLAST)

001: MDSLVAPEFS PDMVLGFISQ ILMEEDMDDK FDVFHEDLAL LAAEKPFYEI LGETFPPLPD QNSGPSAESP DGSSIIESLS NPLSDNDLVI QSTPAWQFQK
101: GLEEARRFLP SNWKLAEINA DEKHESPIRE PRGRKTHHDD DLDLQEGRSN KQSALSTEEP LRPDILDDVL LCGKKQSMKD VVDLRTLLVH CAESVAIGDR
201: RSAGELLKQI RQHSSPFGDA NERLAHCFAD GLEARLAGTG SQIYHSIVAK RISTSDILKG YKCYMRACPF KKIAYLYSNR TILNRLASQP GGPPRLRITG
301: IDKPSPGFRP TERIDETGQR LADYARRFGI PFEFHAIATK WDTIRTEDLN IDKDEVLVVN SLFQFKSLID ETGSERVERP ETYKQWQVRN IRAGFKQLPL
401: NSDIIKMAKE KLKAYHKDFV LDVDGQWLLQ GWKGRILQAF SAWRSDDYS

Best Arabidopsis Sequence Match ( AT2G29060.2 )
(BLAST)

001: MGSYSAGFPG SLDWFDFPGL GNGSYLNDQP LLDIGSVPPP LDPYPQQNLA SADADFSDSV LKYISQVLME EDMEDKPCMF HDALSLQAAE KSLYEALGEK
101: YPVDDSDQPL TTTTSLAQLT PIPSNFIFQS TSTRASSGNA VFGSSFSGDL VSNMFNDTDL ALQFKKGMEE ASKFLPKSSQ LVIDNSVPNR LTGKKSHWRE
201: EEHLTEERSK KQSAIYVDET DELTDMFDNI LIFGEAKEQP VCILNESFPK EPAKASTFSK SPKGEKPEAS GNSYTKETPD LRTMLVSCAQ AVSINDRRTA
301: DELLSRIRQH SSSYGDGTER LAHYFANSLE ARLAGIGTQV YTALSSKKTS TSDMLKAYQT YISVCPFKKI AIIFANHSIM RLASSANAKT IHIIDFGISD
401: GFQWPSLIHR LAWRRGSSCK LRITGIELPQ RGFRPAEGVI ETGRRLAKYC QKFNIPFEYN AIAQKWESIK LEDLKLKEGE FVAVNSLFRF RNLLDETVAV
501: HSPRDTVLKL IRKIKPDVFI PGILSGSYNA PFFVTRFREV LFHYSSLFDM CDTNLTREDP MRVMFEKEFY GREIMNVVAC EGTERVERPE SYKQWQARAM
601: RAGFRQIPLE KELVQKLKLM VESGYKPKEF DVDQDCHWLL QGWKGRIVYG SSIWVPL

Arabidopsis Description

SCL33Scarecrow-like protein 33 [Source:UniProtKB/Swiss-Prot;Acc:P0C883]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.