Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G176300.1 | Wheat | cytosol | 91.43 | 96.44 |
| TraesCS4B01G141400.1 | Wheat | cytosol | 88.34 | 95.16 |
| HORVU4Hr1G027900.1 | Barley | cytosol | 86.1 | 92.6 |
| TraesCS4D01G136300.1 | Wheat | cytosol | 77.25 | 81.6 |
| Os11t0705900-01 | Rice | cytosol | 54.35 | 60.28 |
| OQU84113 | Sorghum | cytosol, nucleus, plastid | 51.54 | 57.43 |
| Zm00001d048601_P001 | Maize | cytosol | 51.54 | 57.17 |
| TraesCS4D01G136000.1 | Wheat | cytosol | 46.63 | 51.16 |
| TraesCS4D01G135900.1 | Wheat | cytosol | 44.38 | 49.53 |
| TraesCS4D01G136100.1 | Wheat | cytosol | 40.17 | 48.97 |
| TraesCS7D01G174300.1 | Wheat | cytosol | 50.0 | 48.83 |
| TraesCS7D01G174100.1 | Wheat | cytosol | 47.19 | 47.86 |
| TraesCS4D01G332000.1 | Wheat | cytosol | 45.08 | 47.56 |
| TraesCS4D01G136200.1 | Wheat | cytosol | 40.45 | 47.37 |
| TraesCS5D01G092000.1 | Wheat | cytosol | 40.73 | 47.08 |
| TraesCS4D01G136500.1 | Wheat | peroxisome | 50.56 | 46.94 |
| TraesCS4D01G135500.1 | Wheat | cytosol | 41.85 | 46.13 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 27.39 | 43.43 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 35.11 | 38.05 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 37.36 | 34.37 |
| TraesCS3D01G354100.1 | Wheat | cytosol, extracellular, nucleus | 38.62 | 33.62 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 31.74 | 31.7 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 29.49 | 30.43 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 30.9 | 30.34 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 29.63 | 30.1 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 28.23 | 29.73 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 29.49 | 29.09 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 28.79 | 28.12 |
| TraesCS2D01G198200.1 | Wheat | cytosol | 20.37 | 26.13 |
| TraesCS5D01G419400.2 | Wheat | cytosol | 19.66 | 25.45 |
| TraesCS3D01G403100.1 | Wheat | cytosol | 18.68 | 24.09 |
| TraesCS4D01G266400.1 | Wheat | cytosol | 17.98 | 23.88 |
| TraesCS2D01G220200.1 | Wheat | cytosol | 18.68 | 23.33 |
| TraesCS2D01G393200.1 | Wheat | cytosol | 17.56 | 19.94 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G136400.1 | EnsemblPlantsGene:TraesCS4D01G136400 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF20 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr4D:-:122285385..122287523
Molecular Weight (calculated)
79100.5 Da
IEP (calculated)
7.484
GRAVY (calculated)
-0.381
Length
712 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPSHPILLK KKKCSGVMSN AALIATLLQW QVPTRSAMAA TPEEFLGQQG FLARLEPPSP SLFLDLPPTP RDDDGHSSFD DMVLPYISRL LMEEGTEDHL
101: FYLYPNHPAV LRAQQPFAQI LVDVADSASA SGSTSSPSPS SSSDATASTT PSTATASASA SPDDAPVQIS RPPYTDVNGH ASASPDNHSS GLLNGDEMAK
201: RPSSDFFSHL LPGDQDMLNL AFRKGMEEAS KFLPPDISLP PINEGTVVGG GNAVSLKKKR AALPLEPDVG RPSKLMMPEQ EERKMFDEMM FQEHEICMKG
301: THNLIAAADG EPGKNSRKKD RSRKAVDDRE MVDLHTLLLN CAQALSTDNR QSAIELLKRI RQHSSPKGDA GQRLAHYFAN GLEARLAGRG SELYQSLLLS
401: RISVADFLKA NQLYMAACCC KKVAYIFADK TICNAVAGKR RLHIVDYGLN QGLQWPGLLR MLAAREGGPP EVRITGIDLP QPGFHGAYHI EETGRRLSNF
501: ARVFGVPFKF RGIPAKRETV RPEDLNIDRD EVLVVISLCQ FRHLMDESLG FDGPSPRDQV LNNIRKMRPD VFIHGIMNGS YGATSFLTRF REALFHYSAQ
601: FDLLDTTVPR DNEGRLLLER DIFGRSCLNV LACEGADRVE RPETYKQWQL RNHRAGLRQL PLNPEVVKLV LDKVKDNYHR NFVVDADQRW LLHRWKGRVL
701: YAWSSWIAAD AT
101: FYLYPNHPAV LRAQQPFAQI LVDVADSASA SGSTSSPSPS SSSDATASTT PSTATASASA SPDDAPVQIS RPPYTDVNGH ASASPDNHSS GLLNGDEMAK
201: RPSSDFFSHL LPGDQDMLNL AFRKGMEEAS KFLPPDISLP PINEGTVVGG GNAVSLKKKR AALPLEPDVG RPSKLMMPEQ EERKMFDEMM FQEHEICMKG
301: THNLIAAADG EPGKNSRKKD RSRKAVDDRE MVDLHTLLLN CAQALSTDNR QSAIELLKRI RQHSSPKGDA GQRLAHYFAN GLEARLAGRG SELYQSLLLS
401: RISVADFLKA NQLYMAACCC KKVAYIFADK TICNAVAGKR RLHIVDYGLN QGLQWPGLLR MLAAREGGPP EVRITGIDLP QPGFHGAYHI EETGRRLSNF
501: ARVFGVPFKF RGIPAKRETV RPEDLNIDRD EVLVVISLCQ FRHLMDESLG FDGPSPRDQV LNNIRKMRPD VFIHGIMNGS YGATSFLTRF REALFHYSAQ
601: FDLLDTTVPR DNEGRLLLER DIFGRSCLNV LACEGADRVE RPETYKQWQL RNHRAGLRQL PLNPEVVKLV LDKVKDNYHR NFVVDADQRW LLHRWKGRVL
701: YAWSSWIAAD AT
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.