Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G176600.1 | Wheat | cytosol | 97.53 | 97.53 |
| TraesCS4B01G141100.1 | Wheat | cytosol | 93.22 | 96.18 |
| HORVU4Hr1G027520.2 | Barley | cytosol, peroxisome | 91.68 | 91.12 |
| TraesCS4D01G136300.1 | Wheat | cytosol | 52.08 | 50.15 |
| TraesCS4D01G136100.1 | Wheat | cytosol | 43.76 | 48.63 |
| TraesCS7D01G174300.1 | Wheat | cytosol | 54.55 | 48.56 |
| TraesCS4D01G136200.1 | Wheat | cytosol | 45.15 | 48.19 |
| TraesCS7D01G174100.1 | Wheat | cytosol | 51.62 | 47.72 |
| OQU84116 | Sorghum | nucleus | 45.45 | 47.66 |
| TraesCS4D01G135900.1 | Wheat | cytosol | 46.38 | 47.18 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 32.36 | 46.77 |
| TraesCS4D01G136400.1 | Wheat | mitochondrion | 51.16 | 46.63 |
| TraesCS5D01G092000.1 | Wheat | cytosol | 44.07 | 46.43 |
| TraesCS4D01G135500.1 | Wheat | cytosol | 45.45 | 45.67 |
| TraesCS4D01G332000.1 | Wheat | cytosol | 45.3 | 43.56 |
| TraesCS4D01G136500.1 | Wheat | peroxisome | 51.0 | 43.16 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 38.21 | 37.75 |
| Os11t0139600-01 | Rice | nucleus | 32.2 | 35.85 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 40.37 | 33.85 |
| TraesCS3D01G354100.1 | Wheat | cytosol, extracellular, nucleus | 40.52 | 32.15 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 35.29 | 32.12 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 34.67 | 32.1 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 35.59 | 31.86 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 32.2 | 30.29 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 32.51 | 29.22 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 32.67 | 29.08 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 29.43 | 28.25 |
| TraesCS2D01G198200.1 | Wheat | cytosol | 20.34 | 23.78 |
| TraesCS5D01G419400.2 | Wheat | cytosol | 19.72 | 23.27 |
| TraesCS4D01G266400.1 | Wheat | cytosol | 19.11 | 23.13 |
| TraesCS3D01G403100.1 | Wheat | cytosol | 19.26 | 22.64 |
| TraesCS2D01G220200.1 | Wheat | cytosol | 18.8 | 21.4 |
| TraesCS2D01G393200.1 | Wheat | cytosol | 17.57 | 18.18 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G136000.1 | EnsemblPlantsGene:TraesCS4D01G136000 | InterPro:IPR005202 | InterPro:TF_GRAS | ncoils:Coil | PANTHER:PTHR31636 |
| PANTHER:PTHR31636:SF124 | PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : |
Description
No Description!
Coordinates
chr4D:-:122257612..122259561
Molecular Weight (calculated)
72742.0 Da
IEP (calculated)
5.599
GRAVY (calculated)
-0.354
Length
649 amino acids
Sequence
(BLAST)
(BLAST)
001: MPIAREELLG LKEHMEPPPP SPSVYLDIPP SPCGGSVGDL VLPYITRILM EEDIDDRFFY QYPDHLAFLQ AQQQFTQILD DAKNLLSCEG GDMEKMHSDA
101: SLQGIRGGSM CLADKDVPSW TFSDGAEVDN NGDQSKLNRS NEAMLNFAFL KGMEEANKFL PRDNQPQADV FSVDQAKEIF GRSISGGARK GQRDVDKLEE
201: VVGRSSKLLM PELEEDGARE MINKIMLNSY ELCGETMEKL QITMENIRAD RKNKKAVRGK QGKKEAVDLR GLLLCCAQEV ATGNRHGAGN LLKQIRQHAS
301: ATGDAAQRLA YCFAKGLEAR LAGTGSQVYR SLMAKHTSTM EFLKGYELFM AACSFKRVAF TFSSMTIFDA VEGKSKLHIV DYGLHYGCQW PGLLAWLATR
401: DGGPPEVRIT GIDLPQPGFR PAKRLEETGR ALSNCARQFG LPFKFHAIAA KWETIRAEDL NIDPDEVLVV NDLFNFNTLM DESLVIDRPS PRDVVLSNIR
501: EMQPDVFIQG VVNGSSGPFF LARFREALFF YSSVFDMLDA TTPPDSYQRF VLERDMFGQC ALNTIACESA DRVERPETYK QWQLRNQRAG LRQLPLKPII
601: TKVASGKVKS LYHKEFVVDV DQGWLLQGWK GRILYAHSAW VADDTSSEY
101: SLQGIRGGSM CLADKDVPSW TFSDGAEVDN NGDQSKLNRS NEAMLNFAFL KGMEEANKFL PRDNQPQADV FSVDQAKEIF GRSISGGARK GQRDVDKLEE
201: VVGRSSKLLM PELEEDGARE MINKIMLNSY ELCGETMEKL QITMENIRAD RKNKKAVRGK QGKKEAVDLR GLLLCCAQEV ATGNRHGAGN LLKQIRQHAS
301: ATGDAAQRLA YCFAKGLEAR LAGTGSQVYR SLMAKHTSTM EFLKGYELFM AACSFKRVAF TFSSMTIFDA VEGKSKLHIV DYGLHYGCQW PGLLAWLATR
401: DGGPPEVRIT GIDLPQPGFR PAKRLEETGR ALSNCARQFG LPFKFHAIAA KWETIRAEDL NIDPDEVLVV NDLFNFNTLM DESLVIDRPS PRDVVLSNIR
501: EMQPDVFIQG VVNGSSGPFF LARFREALFF YSSVFDMLDA TTPPDSYQRF VLERDMFGQC ALNTIACESA DRVERPETYK QWQLRNQRAG LRQLPLKPII
601: TKVASGKVKS LYHKEFVVDV DQGWLLQGWK GRILYAHSAW VADDTSSEY
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.