Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G177100.1 | Wheat | nucleus | 95.05 | 95.49 |
| TraesCS4D01G135900.1 | Wheat | cytosol | 61.76 | 62.54 |
| TraesCS4D01G332000.1 | Wheat | cytosol | 63.78 | 61.04 |
| OQU84120 | Sorghum | nucleus | 50.15 | 51.1 |
| KXG29232 | Sorghum | cytosol | 51.24 | 48.68 |
| Zm00001d048600_P001 | Maize | nucleus | 48.45 | 48.53 |
| TraesCS4D01G136100.1 | Wheat | cytosol | 42.88 | 47.43 |
| KXG26392 | Sorghum | cytosol | 46.28 | 47.16 |
| Zm00001d003553_P001 | Maize | cytosol | 44.27 | 47.12 |
| TraesCS4D01G136200.1 | Wheat | cytosol | 42.88 | 45.56 |
| TraesCS4D01G136000.1 | Wheat | cytosol | 45.67 | 45.45 |
| TraesCS4D01G136300.1 | Wheat | cytosol | 47.06 | 45.1 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 29.57 | 42.54 |
| TraesCS4D01G136400.1 | Wheat | mitochondrion | 46.13 | 41.85 |
| TraesCS7D01G174300.1 | Wheat | cytosol | 47.06 | 41.7 |
| TraesCS7D01G174100.1 | Wheat | cytosol | 44.12 | 40.6 |
| TraesCS5D01G092000.1 | Wheat | cytosol | 38.54 | 40.42 |
| TraesCS4D01G136500.1 | Wheat | peroxisome | 44.89 | 37.81 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 34.83 | 34.25 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 39.01 | 32.56 |
| TraesCS3D01G354100.1 | Wheat | cytosol, extracellular, nucleus | 39.63 | 31.3 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 32.51 | 30.43 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 32.35 | 29.31 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 32.2 | 28.81 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 31.11 | 28.67 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 29.57 | 28.25 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 31.27 | 27.86 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 30.5 | 27.02 |
| TraesCS5D01G419400.2 | Wheat | cytosol | 21.67 | 25.45 |
| TraesCS2D01G198200.1 | Wheat | cytosol | 21.67 | 25.23 |
| TraesCS4D01G266400.1 | Wheat | cytosol | 19.66 | 23.69 |
| TraesCS2D01G220200.1 | Wheat | cytosol | 19.35 | 21.93 |
| TraesCS3D01G403100.1 | Wheat | cytosol | 18.73 | 21.92 |
| TraesCS2D01G393200.1 | Wheat | cytosol | 17.8 | 18.34 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G135500.1 | EnsemblPlantsGene:TraesCS4D01G135500 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF27 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr4D:-:122169499..122171439
Molecular Weight (calculated)
72174.6 Da
IEP (calculated)
6.978
GRAVY (calculated)
-0.346
Length
646 amino acids
Sequence
(BLAST)
(BLAST)
001: MPAMAAAQEE PLGLVKPAPP PPPPSIFLDQ PSMTNGDSQS QQPQDDLALA YISRMLMEED IIDKFFYQHP EHPTLLQAEQ PFAEILSASG ITTAGAHGSS
101: ALLPSQGNNT GIMASGFLSS EVRSQALILN GTVTAEEPSS GVTMGDLSSM AFFKGMEEAN SFLPTVNVMV DARGRKKRSG MDGETEACMG RSSKQIAVRV
201: LAHDDSAEED TALELDLLIL NGYNMHSNET MKERGDQAAH QSICRKAPCV RHSARQKVVA DLETLLIRCA EAVATNDRSN AGDLLKKIKQ HSLPTGDARQ
301: RLAYYFAEGL EARLAGTGRQ MYHSITMANH TSTVELFKSY HLCIAACCFL KVSLNFSNKN IYNAVAGRKK LHIVHYGVND GFQWPDLLRW LADREGGPPE
401: VRITGIISPQ PGPCPAKQAK ETKRRLSYCA RQFGVPFKFH AIIAKLEAVH AEDLDIDPDE VLVVNNMFHF RTLMDESLTF DMENPRDLVL NTIKKMKPSM
501: LIHAAVNGAY SSAFFMTRFR QALNNFTAQF DMMETTMMQN KEKRLLVERH IFARSVMNII ACEGPDRVER PQNYKEWHAR NQRAGLRQLS LDPDIVKMLK
601: DQVKKQYHKH FMIDEDQRWL LLGWKGRVLY ALSTWVADDA SGSQLE
101: ALLPSQGNNT GIMASGFLSS EVRSQALILN GTVTAEEPSS GVTMGDLSSM AFFKGMEEAN SFLPTVNVMV DARGRKKRSG MDGETEACMG RSSKQIAVRV
201: LAHDDSAEED TALELDLLIL NGYNMHSNET MKERGDQAAH QSICRKAPCV RHSARQKVVA DLETLLIRCA EAVATNDRSN AGDLLKKIKQ HSLPTGDARQ
301: RLAYYFAEGL EARLAGTGRQ MYHSITMANH TSTVELFKSY HLCIAACCFL KVSLNFSNKN IYNAVAGRKK LHIVHYGVND GFQWPDLLRW LADREGGPPE
401: VRITGIISPQ PGPCPAKQAK ETKRRLSYCA RQFGVPFKFH AIIAKLEAVH AEDLDIDPDE VLVVNNMFHF RTLMDESLTF DMENPRDLVL NTIKKMKPSM
501: LIHAAVNGAY SSAFFMTRFR QALNNFTAQF DMMETTMMQN KEKRLLVERH IFARSVMNII ACEGPDRVER PQNYKEWHAR NQRAGLRQLS LDPDIVKMLK
601: DQVKKQYHKH FMIDEDQRWL LLGWKGRVLY ALSTWVADDA SGSQLE
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.