Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G030800.1 | Wheat | cytosol | 77.92 | 81.03 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 45.27 | 79.9 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 77.78 | 78.64 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 76.27 | 77.98 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 74.49 | 74.9 |
| Zm00001d035670_P001 | Maize | cytosol | 53.77 | 53.99 |
| EES18882 | Sorghum | cytosol | 53.22 | 52.93 |
| EES18880 | Sorghum | cytosol | 53.36 | 52.5 |
| Solyc04g011630.1.1 | Tomato | cytosol | 11.8 | 50.59 |
| VIT_06s0004g04990.t01 | Wine grape | cytosol | 26.89 | 44.34 |
| Bra002564.1-P | Field mustard | endoplasmic reticulum, golgi | 18.66 | 42.9 |
| GSMUA_Achr8P02550_001 | Banana | nucleus | 23.05 | 42.86 |
| CDX80265 | Canola | endoplasmic reticulum, golgi | 18.52 | 42.59 |
| CDX68389 | Canola | cytosol | 4.66 | 40.0 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 37.45 | 39.57 |
| GSMUA_Achr6P34090_001 | Banana | nucleus | 32.78 | 39.05 |
| PGSC0003DMT400005480 | Potato | cytosol | 26.06 | 39.01 |
| PGSC0003DMT400049420 | Potato | cytosol | 34.98 | 38.4 |
| KRH24780 | Soybean | cytosol | 34.57 | 38.18 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 36.9 | 37.26 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 34.29 | 36.98 |
| KRH49113 | Soybean | cytosol | 36.9 | 36.65 |
| VIT_06s0004g04970.t01 | Wine grape | cytosol | 33.06 | 36.63 |
| KRH10240 | Soybean | cytosol | 30.32 | 36.47 |
| VIT_08s0007g00510.t01 | Wine grape | cytosol, plastid | 35.25 | 36.25 |
| KRG99969 | Soybean | cytosol | 36.63 | 36.23 |
| KRH29771 | Soybean | cytosol | 33.61 | 36.03 |
| KRH65839 | Soybean | cytosol, plastid | 36.08 | 36.03 |
| PGSC0003DMT400016258 | Potato | cytosol | 35.94 | 35.99 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 38.0 | 35.79 |
| PGSC0003DMT400069949 | Potato | cytosol | 36.63 | 35.74 |
| Solyc05g053090.1.1 | Tomato | cytosol | 36.35 | 35.67 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 32.1 | 35.62 |
| GSMUA_AchrUn_... | Banana | cytosol | 31.96 | 35.36 |
| VIT_13s0019g01780.t01 | Wine grape | nucleus | 29.08 | 35.33 |
| CDY71578 | Canola | nucleus, plastid | 25.24 | 35.32 |
| KRH23095 | Soybean | cytosol | 31.82 | 35.31 |
| VIT_13s0019g01710.t01 | Wine grape | cytosol | 35.12 | 35.21 |
| PGSC0003DMT400022997 | Potato | cytosol, plastid | 36.63 | 35.09 |
| KRH24773 | Soybean | nucleus | 33.06 | 35.08 |
| VIT_13s0019g01810.t01 | Wine grape | cytosol | 35.94 | 35.03 |
| Solyc09g010920.1.1 | Tomato | cytosol | 36.49 | 34.95 |
| AT2G29065.1 | Thale cress | cytosol, nucleus, plastid | 30.18 | 34.92 |
| Bra033813.1-P | Field mustard | nucleus | 27.85 | 34.88 |
| KRH29773 | Soybean | cytosol | 29.36 | 34.85 |
| CDY47877 | Canola | nucleus | 29.49 | 34.79 |
| KRH23094 | Soybean | cytosol | 26.34 | 34.72 |
| Bra000012.1-P | Field mustard | cytosol, nucleus, peroxisome | 31.96 | 34.62 |
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 31.96 | 34.62 |
| CDX79750 | Canola | peroxisome | 31.96 | 34.57 |
| KRH29774 | Soybean | cytosol | 29.9 | 34.55 |
| Bra028391.1-P | Field mustard | nucleus | 29.36 | 34.52 |
| CDY33040 | Canola | nucleus | 28.26 | 34.51 |
| Solyc10g086530.1.1 | Tomato | cytosol | 35.94 | 34.43 |
| CDY39530 | Canola | cytosol | 29.08 | 34.25 |
| KRH29779 | Soybean | cytosol | 34.84 | 34.23 |
| PGSC0003DMT400063769 | Potato | cytosol, nucleus, peroxisome | 30.32 | 34.21 |
| KRH24775 | Soybean | cytosol | 31.82 | 34.12 |
| CDX82987 | Canola | nucleus | 28.12 | 34.11 |
| AT3G46600.1 | Thale cress | cytosol | 27.16 | 33.96 |
| KRH29775 | Soybean | nucleus | 31.28 | 33.88 |
| TraesCS4D01G136100.1 | Wheat | cytosol | 27.02 | 33.73 |
| KRH23089 | Soybean | cytosol | 29.77 | 33.7 |
| VIT_13s0019g01700.t01 | Wine grape | cytosol | 35.12 | 33.68 |
| VIT_06s0004g04950.t01 | Wine grape | cytosol | 34.71 | 33.55 |
| VIT_06s0004g04980.t01 | Wine grape | nucleus | 32.37 | 33.52 |
| VIT_13s0019g01790.t01 | Wine grape | cytosol | 33.06 | 33.52 |
| KRH10243 | Soybean | nucleus | 30.45 | 33.38 |
| PGSC0003DMT400077972 | Potato | cytosol | 34.29 | 33.24 |
| Solyc01g100200.2.1 | Tomato | nucleus | 30.32 | 33.18 |
| Solyc06g076280.1.1 | Tomato | cytosol | 34.02 | 33.16 |
| AT5G59450.1 | Thale cress | nucleus | 27.71 | 33.11 |
| CDX86475 | Canola | nucleus | 32.24 | 33.1 |
| Solyc06g082530.1.1 | Tomato | cytosol | 29.63 | 33.08 |
| CDY47878 | Canola | nucleus | 31.28 | 33.0 |
| KRH23091 | Soybean | endoplasmic reticulum, plasma membrane | 33.61 | 32.97 |
| TraesCS5D01G092000.1 | Wheat | cytosol | 27.85 | 32.95 |
| TraesCS4D01G136200.1 | Wheat | cytosol | 27.3 | 32.73 |
| KRH10241 | Soybean | cytosol, nucleus, peroxisome | 30.86 | 32.7 |
| KRH24778 | Soybean | nucleus | 30.32 | 32.69 |
| TraesCS4D01G136000.1 | Wheat | cytosol | 29.08 | 32.67 |
| PGSC0003DMT400078286 | Potato | nucleus | 29.77 | 32.53 |
| AT2G29060.1 | Thale cress | cytosol | 30.86 | 32.42 |
| Bra028390.1-P | Field mustard | cytosol | 31.28 | 32.29 |
| KRH23090 | Soybean | vacuole | 27.43 | 32.21 |
| Bra030688.1-P | Field mustard | nucleus | 32.78 | 32.17 |
| TraesCS3D01G354100.1 | Wheat | cytosol, extracellular, nucleus | 35.94 | 32.03 |
| CDX77228 | Canola | cytosol | 29.22 | 31.7 |
| CDX68388 | Canola | cytosol | 17.97 | 31.64 |
| CDY15616 | Canola | nucleus | 31.0 | 31.61 |
| CDY06266 | Canola | cytosol | 27.3 | 31.49 |
| AT2G37650.1 | Thale cress | cytosol | 31.0 | 31.48 |
| Bra015584.1-P | Field mustard | cytosol | 18.79 | 31.42 |
| CDY31749 | Canola | cytosol | 31.28 | 31.41 |
| Bra035653.1-P | Field mustard | cytosol | 31.0 | 31.3 |
| TraesCS7D01G174100.1 | Wheat | cytosol | 30.04 | 31.2 |
| TraesCS4D01G135900.1 | Wheat | cytosol | 27.3 | 31.19 |
| TraesCS4D01G136300.1 | Wheat | cytosol | 28.67 | 31.01 |
| TraesCS7D01G174300.1 | Wheat | cytosol | 30.59 | 30.59 |
| AT1G07530.1 | Thale cress | cytosol | 32.24 | 30.56 |
| TraesCS4D01G135500.1 | Wheat | cytosol | 27.02 | 30.5 |
| VIT_06s0004g04960.t01 | Wine grape | nucleus | 33.2 | 30.36 |
| Bra031581.1-P | Field mustard | cytosol | 27.43 | 29.94 |
| AT1G07520.3 | Thale cress | cytosol | 28.4 | 29.74 |
| Bra031580.1-P | Field mustard | cytosol | 27.98 | 29.57 |
| CDY06265 | Canola | cytosol | 27.98 | 29.57 |
| TraesCS4D01G332000.1 | Wheat | cytosol | 27.16 | 29.33 |
| CDY09912 | Canola | cytosol | 27.85 | 29.0 |
| TraesCS4D01G136400.1 | Wheat | mitochondrion | 28.12 | 28.79 |
| TraesCS4D01G136500.1 | Wheat | peroxisome | 28.94 | 27.51 |
| CDY09911 | Canola | nucleus | 21.26 | 26.54 |
| TraesCS2D01G198200.1 | Wheat | cytosol | 19.07 | 25.05 |
| TraesCS4D01G266400.1 | Wheat | cytosol | 17.56 | 23.88 |
| TraesCS5D01G419400.2 | Wheat | cytosol | 17.83 | 23.64 |
| TraesCS3D01G403100.1 | Wheat | cytosol | 17.01 | 22.46 |
| TraesCS2D01G220200.1 | Wheat | cytosol | 16.46 | 21.05 |
| TraesCS2D01G393200.1 | Wheat | cytosol | 15.23 | 17.7 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G031200.1 | EnsemblPlantsGene:TraesCS1D01G031200 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF14 |
| PFAM:PF03514 | PFscan:PS50985 | MapMan:15.5.12 | : | : | : |
Description
No Description!
Coordinates
chr1D:-:12254218..12256587
Molecular Weight (calculated)
82976.7 Da
IEP (calculated)
8.003
GRAVY (calculated)
-0.521
Length
729 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIEPLRDNL DGIAATDQPY DGDSSSEQQL TMYNYDLSSP HSTVLNPANQ PSTYLLGGVT SPGLCSVNSS PGQNQVQIAA GRSPEHHQIR SNNALHYISQ
101: MLMEDVDEGV DVCQGETALQ AAEKPFRDIL GEVYASATDW PPLHRNNKPD NADKSGTSRY KRLRTTSFSN DYSSYNVLQP LATPLSPYTC NRSLFLPDHP
201: LVSVGWTSKS GFPALHCQRG VEEEKMCAPS IDKLVIYLKN DVLYISQLTT KVKVVERSEN AIFEVADQRG WDIFQDRSNT HHAITTCAII RNENFDRVLL
301: CYGRKSFDRR TRLRERMAGE GNNNSLKGRS KGRLKLWQRK QPRRELVDLR NLLINCAEAV AEGNHLLASE ILKKIGQHSS PDGTCTQRLA FYLVDGLEAH
401: LAGTRSQVYQ NLMERRTSTT DWLEAYSLFI ASCPFDRASY HFANQAILDV SQGHPRVHII DFGIGFGFQR PLMIQRFAKQ EEGAPKLRIT GIDVPQPGLR
501: PCEMIKETGK RLADYANMFK VPFQYQGIAA SRWETIKIED LNIEEGEVLI INCMFRMKNL GHETKAINST RDEVLKTMRR MNPKIFISGT VNGLRSSPFF
601: IQRFKEVMFH YSSMFDMMDA NVPRENEARK TIERILFGRD ALNSIACEDA EWTERRESYR QWQARFLKAG FQQLPVDPAI LNKIVQKKNT LYHEELFAVE
701: DGGWLLQGWK GRVIYAISKW KPNETHDDK
101: MLMEDVDEGV DVCQGETALQ AAEKPFRDIL GEVYASATDW PPLHRNNKPD NADKSGTSRY KRLRTTSFSN DYSSYNVLQP LATPLSPYTC NRSLFLPDHP
201: LVSVGWTSKS GFPALHCQRG VEEEKMCAPS IDKLVIYLKN DVLYISQLTT KVKVVERSEN AIFEVADQRG WDIFQDRSNT HHAITTCAII RNENFDRVLL
301: CYGRKSFDRR TRLRERMAGE GNNNSLKGRS KGRLKLWQRK QPRRELVDLR NLLINCAEAV AEGNHLLASE ILKKIGQHSS PDGTCTQRLA FYLVDGLEAH
401: LAGTRSQVYQ NLMERRTSTT DWLEAYSLFI ASCPFDRASY HFANQAILDV SQGHPRVHII DFGIGFGFQR PLMIQRFAKQ EEGAPKLRIT GIDVPQPGLR
501: PCEMIKETGK RLADYANMFK VPFQYQGIAA SRWETIKIED LNIEEGEVLI INCMFRMKNL GHETKAINST RDEVLKTMRR MNPKIFISGT VNGLRSSPFF
601: IQRFKEVMFH YSSMFDMMDA NVPRENEARK TIERILFGRD ALNSIACEDA EWTERRESYR QWQARFLKAG FQQLPVDPAI LNKIVQKKNT LYHEELFAVE
701: DGGWLLQGWK GRVIYAISKW KPNETHDDK
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.