Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G012520.1 | Barley | cytosol | 58.86 | 93.2 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 91.55 | 91.55 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 91.0 | 91.12 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 77.01 | 82.25 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 75.62 | 79.13 |
| OQU91407 | Sorghum | nucleus | 52.77 | 55.54 |
| KXG38064 | Sorghum | nucleus | 54.71 | 54.86 |
| Zm00001d033166_P001 | Maize | nucleus | 55.54 | 54.78 |
| EER91260 | Sorghum | nucleus | 54.16 | 54.23 |
| OQU91406 | Sorghum | nucleus | 55.82 | 53.88 |
| CDX68389 | Canola | cytosol | 5.96 | 50.59 |
| Solyc04g011630.1.1 | Tomato | cytosol | 11.77 | 50.0 |
| Bra002564.1-P | Field mustard | endoplasmic reticulum, golgi | 19.11 | 43.53 |
| VIT_06s0004g04990.t01 | Wine grape | cytosol | 26.59 | 43.44 |
| CDX80265 | Canola | endoplasmic reticulum, golgi | 18.98 | 43.22 |
| PGSC0003DMT400005480 | Potato | cytosol | 26.87 | 39.84 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 39.47 | 39.31 |
| CDY71578 | Canola | nucleus, plastid | 28.12 | 38.96 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 38.37 | 38.85 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 37.53 | 38.66 |
| GSMUA_Achr8P02550_001 | Banana | nucleus | 20.91 | 38.52 |
| PGSC0003DMT400049420 | Potato | cytosol | 35.04 | 38.1 |
| Bra015584.1-P | Field mustard | cytosol | 22.58 | 37.39 |
| VIT_08s0007g00510.t01 | Wine grape | cytosol, plastid | 36.43 | 37.09 |
| KRH10240 | Soybean | cytosol | 31.02 | 36.96 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 37.26 | 36.9 |
| VIT_13s0019g01780.t01 | Wine grape | nucleus | 30.33 | 36.5 |
| Bra028391.1-P | Field mustard | nucleus | 31.02 | 36.13 |
| CDY47877 | Canola | nucleus | 30.89 | 36.08 |
| GSMUA_Achr6P34090_001 | Banana | nucleus | 30.47 | 35.95 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 32.69 | 35.92 |
| CDY39530 | Canola | cytosol | 30.75 | 35.86 |
| AT2G29065.1 | Thale cress | cytosol, nucleus, plastid | 31.02 | 35.56 |
| KRH29773 | Soybean | cytosol | 30.06 | 35.34 |
| PGSC0003DMT400016258 | Potato | cytosol | 35.6 | 35.3 |
| CDX79750 | Canola | peroxisome | 32.83 | 35.16 |
| PGSC0003DMT400063769 | Potato | cytosol, nucleus, peroxisome | 31.44 | 35.14 |
| Bra000012.1-P | Field mustard | cytosol, nucleus, peroxisome | 32.69 | 35.07 |
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 32.69 | 35.07 |
| CDY33040 | Canola | nucleus | 28.95 | 35.01 |
| Solyc10g086530.1.1 | Tomato | cytosol | 36.84 | 34.95 |
| KRH65839 | Soybean | cytosol, plastid | 35.32 | 34.93 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 37.4 | 34.88 |
| Solyc05g053090.1.1 | Tomato | cytosol | 35.87 | 34.86 |
| PGSC0003DMT400069949 | Potato | cytosol | 36.01 | 34.81 |
| KRH24780 | Soybean | cytosol | 31.72 | 34.7 |
| KRH49113 | Soybean | cytosol | 34.9 | 34.33 |
| KRG99969 | Soybean | cytosol | 35.04 | 34.33 |
| CDY47878 | Canola | nucleus | 32.83 | 34.3 |
| VIT_13s0019g01810.t01 | Wine grape | cytosol | 35.46 | 34.22 |
| VIT_06s0004g04970.t01 | Wine grape | cytosol | 31.16 | 34.19 |
| KRH23095 | Soybean | cytosol | 31.02 | 34.09 |
| KRH29774 | Soybean | cytosol | 29.78 | 34.07 |
| AT5G59450.1 | Thale cress | nucleus | 28.67 | 33.93 |
| Bra028390.1-P | Field mustard | cytosol | 33.1 | 33.85 |
| Bra033813.1-P | Field mustard | nucleus | 27.29 | 33.85 |
| AT2G37650.1 | Thale cress | cytosol | 33.66 | 33.84 |
| AT3G46600.1 | Thale cress | cytosol | 27.29 | 33.79 |
| PGSC0003DMT400022997 | Potato | cytosol, plastid | 35.6 | 33.77 |
| Solyc09g010920.1.1 | Tomato | cytosol | 35.6 | 33.77 |
| VIT_06s0004g04980.t01 | Wine grape | nucleus | 32.83 | 33.66 |
| KRH23094 | Soybean | cytosol | 25.76 | 33.63 |
| Solyc01g100200.2.1 | Tomato | nucleus | 31.02 | 33.63 |
| KRH24773 | Soybean | nucleus | 31.99 | 33.62 |
| KRH29775 | Soybean | nucleus | 31.3 | 33.58 |
| CDY06266 | Canola | cytosol | 29.36 | 33.54 |
| TraesCS5D01G092000.1 | Wheat | cytosol | 28.53 | 33.44 |
| VIT_13s0019g01710.t01 | Wine grape | cytosol | 33.66 | 33.42 |
| CDX86475 | Canola | nucleus | 32.83 | 33.38 |
| CDX77228 | Canola | cytosol | 31.02 | 33.33 |
| Solyc06g082530.1.1 | Tomato | cytosol | 30.06 | 33.23 |
| GSMUA_AchrUn_... | Banana | cytosol | 30.19 | 33.08 |
| AT2G29060.1 | Thale cress | cytosol | 31.72 | 33.0 |
| KRH29771 | Soybean | cytosol | 31.02 | 32.94 |
| VIT_13s0019g01700.t01 | Wine grape | cytosol | 34.63 | 32.89 |
| TraesCS4D01G136100.1 | Wheat | cytosol | 26.59 | 32.88 |
| CDX82987 | Canola | nucleus | 27.29 | 32.78 |
| VIT_06s0004g04950.t01 | Wine grape | cytosol | 34.21 | 32.76 |
| KRH24778 | Soybean | nucleus | 30.61 | 32.69 |
| VIT_13s0019g01790.t01 | Wine grape | cytosol | 32.41 | 32.55 |
| PGSC0003DMT400078286 | Potato | nucleus | 30.06 | 32.53 |
| TraesCS4D01G136000.1 | Wheat | cytosol | 29.22 | 32.51 |
| CDY15616 | Canola | nucleus | 32.13 | 32.45 |
| KRH24775 | Soybean | cytosol | 30.47 | 32.35 |
| Solyc06g076280.1.1 | Tomato | cytosol | 33.52 | 32.35 |
| TraesCS4D01G136200.1 | Wheat | cytosol | 27.15 | 32.24 |
| TraesCS4D01G135500.1 | Wheat | cytosol | 28.81 | 32.2 |
| Bra035653.1-P | Field mustard | cytosol | 32.13 | 32.13 |
| Bra030688.1-P | Field mustard | nucleus | 32.96 | 32.03 |
| CDY31749 | Canola | cytosol | 32.13 | 31.96 |
| PGSC0003DMT400077972 | Potato | cytosol | 33.24 | 31.91 |
| Bra031581.1-P | Field mustard | cytosol | 29.22 | 31.59 |
| KRH23089 | Soybean | cytosol | 28.12 | 31.52 |
| KRH23091 | Soybean | endoplasmic reticulum, plasma membrane | 32.27 | 31.36 |
| TraesCS4D01G135900.1 | Wheat | cytosol | 27.7 | 31.35 |
| TraesCS4D01G136300.1 | Wheat | cytosol | 29.22 | 31.31 |
| CDY06265 | Canola | cytosol | 29.78 | 31.16 |
| Bra031580.1-P | Field mustard | cytosol | 29.64 | 31.01 |
| KRH29779 | Soybean | cytosol | 31.86 | 31.0 |
| KRH10241 | Soybean | cytosol, nucleus, peroxisome | 29.5 | 30.96 |
| KRH23090 | Soybean | vacuole | 26.59 | 30.92 |
| TraesCS3D01G354100.1 | Wheat | cytosol, extracellular, nucleus | 34.9 | 30.81 |
| TraesCS7D01G174100.1 | Wheat | cytosol | 29.78 | 30.63 |
| KRH10243 | Soybean | nucleus | 28.12 | 30.53 |
| AT1G07520.3 | Thale cress | cytosol | 29.36 | 30.46 |
| CDY09912 | Canola | cytosol | 29.36 | 30.29 |
| AT1G07530.1 | Thale cress | cytosol | 32.13 | 30.17 |
| TraesCS7D01G174300.1 | Wheat | cytosol | 30.19 | 29.9 |
| CDX68388 | Canola | cytosol | 17.04 | 29.71 |
| TraesCS4D01G136400.1 | Wheat | mitochondrion | 29.09 | 29.49 |
| TraesCS4D01G332000.1 | Wheat | cytosol | 27.56 | 29.48 |
| VIT_06s0004g04960.t01 | Wine grape | nucleus | 31.99 | 28.98 |
| CDY09911 | Canola | nucleus | 22.02 | 27.23 |
| TraesCS4D01G136500.1 | Wheat | peroxisome | 28.39 | 26.73 |
| TraesCS2D01G198200.1 | Wheat | cytosol | 18.14 | 23.6 |
| TraesCS5D01G419400.2 | Wheat | cytosol | 17.73 | 23.27 |
| TraesCS4D01G266400.1 | Wheat | cytosol | 16.34 | 22.01 |
| TraesCS3D01G403100.1 | Wheat | cytosol | 16.76 | 21.92 |
| TraesCS2D01G220200.1 | Wheat | cytosol | 16.48 | 20.88 |
| TraesCS2D01G393200.1 | Wheat | cytosol | 14.68 | 16.91 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G067700.1 | EnsemblPlantsGene:TraesCS3D01G067700 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF60 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr3D:+:29940293..29942461
Molecular Weight (calculated)
81804.3 Da
IEP (calculated)
7.946
GRAVY (calculated)
-0.520
Length
722 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTSDKPSSA DFHGTMANTA CDGAYCSQDF IESSTAKYND SEFILHPPTP MSNYPAPSIA SNKIGSQFCN VSCDDTSAGW RQTSVAEHPR TDSDVTLSYI
101: EQMLMQDIDD KVRAPHGETA IRSMEEPFYE LLGQKYPVLP DLLPLCGCGH LENLNGNVSR LNGKLSCNCS VYISSDDYHP NENSQGSQAP WTLSAIVGEA
201: KQFPLGAERM ELGLNINGLS IAKKPSRDYH SPHMHDRDAM KNGSFEVRGR KVYPGIEELD LLEGRRNKQI AIFSDEPTRN EAFDKVLLCS EQKPIDEGTI
301: SQRTMSDTST KYAQKDQGRK PARQKTRGKT RKKKEVVDLR TLLIHCAQAV SVNNHSLASD ILKTIRQHSS PSGDDTQRLA FYLADCLETR LSGTGSQINR
401: NFIATPRNAA YILKLFHLCF TVSHYLRSSY YFSNKTILDV SKGKSQVHII DFGICFGFQW PSLLKQFADR EGGPPKLRIT GIELPMPGFR PDGRKNNTQL
501: RLVEYAGMFK VPLEYRQISS KWESISIEDL NINKGEVLVV NCINRMKNIA DETISINSAR NRVLHTIKMM KPKVFIHGVV NGSYNTPFFL SRFKEVMYHY
601: ASLFDMLDKT TPRDNETRLI LESDIYKYEM LNVIACEGSE RIERPESYKK WKVRSLRARF EQLPLNPTIV KGVQHIVRQI YHKDLFVDEE DQFLVLGWKG
701: RIVYALSTWK PSESNNESTD DI
101: EQMLMQDIDD KVRAPHGETA IRSMEEPFYE LLGQKYPVLP DLLPLCGCGH LENLNGNVSR LNGKLSCNCS VYISSDDYHP NENSQGSQAP WTLSAIVGEA
201: KQFPLGAERM ELGLNINGLS IAKKPSRDYH SPHMHDRDAM KNGSFEVRGR KVYPGIEELD LLEGRRNKQI AIFSDEPTRN EAFDKVLLCS EQKPIDEGTI
301: SQRTMSDTST KYAQKDQGRK PARQKTRGKT RKKKEVVDLR TLLIHCAQAV SVNNHSLASD ILKTIRQHSS PSGDDTQRLA FYLADCLETR LSGTGSQINR
401: NFIATPRNAA YILKLFHLCF TVSHYLRSSY YFSNKTILDV SKGKSQVHII DFGICFGFQW PSLLKQFADR EGGPPKLRIT GIELPMPGFR PDGRKNNTQL
501: RLVEYAGMFK VPLEYRQISS KWESISIEDL NINKGEVLVV NCINRMKNIA DETISINSAR NRVLHTIKMM KPKVFIHGVV NGSYNTPFFL SRFKEVMYHY
601: ASLFDMLDKT TPRDNETRLI LESDIYKYEM LNVIACEGSE RIERPESYKK WKVRSLRARF EQLPLNPTIV KGVQHIVRQI YHKDLFVDEE DQFLVLGWKG
701: RIVYALSTWK PSESNNESTD DI
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.