Factsheet for TraesCS3B01G080900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G012520.1	Barley	cytosol	57.84	91.45
TraesCS3A01G067900.1	Wheat	cytosol	91.4	91.27
TraesCS3D01G067700.1	Wheat	cytosol	91.12	91.0
TraesCS3B01G081000.1	Wheat	cytosol	80.86	80.08
TraesCS3B01G081100.1	Wheat	nucleus	76.14	76.78
OQU91407	Sorghum	nucleus	51.46	54.08
KXG38064	Sorghum	nucleus	53.12	53.19
Zm00001d033166_P001	Maize	nucleus	53.95	53.14
OQU91406	Sorghum	nucleus	54.37	52.41
EER91260	Sorghum	nucleus	52.29	52.29
Solyc04g011630.1.1	Tomato	cytosol	12.07	51.18
CDX68389	Canola	cytosol	5.96	50.59
TraesCS1B01G037500.1	Wheat	cytosol	26.63	46.49
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	19.42	44.16
CDX80265	Canola	endoplasmic reticulum, golgi	19.28	43.85
VIT_06s0004g04990.t01	Wine grape	cytosol	26.21	42.76
PGSC0003DMT400005480	Potato	cytosol	26.49	39.22
CDY71578	Canola	nucleus, plastid	28.16	38.96
TraesCS1B01G037300.1	Wheat	cytosol	38.0	38.92
PGSC0003DMT400049420	Potato	cytosol	34.95	37.95
GSMUA_Achr8P02550_001	Banana	nucleus	20.39	37.5
Bra015584.1-P	Field mustard	cytosol	22.33	36.93
VIT_13s0019g01780.t01	Wine grape	nucleus	30.65	36.83
TraesCS1B01G037400.1	Wheat	cytosol	36.89	36.79
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	36.06	36.67
TraesCS5B01G494500.1	Wheat	cytosol	32.59	35.77
Bra028391.1-P	Field mustard	nucleus	30.51	35.48
CDY47877	Canola	nucleus	30.37	35.44
KRH10240	Soybean	cytosol	29.68	35.31
PGSC0003DMT400016258	Potato	cytosol	35.64	35.3
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	30.65	35.08
CDY39530	Canola	cytosol	30.1	35.06
Solyc05g053090.1.1	Tomato	cytosol	36.06	34.99
GSMUA_Achr6P34090_001	Banana	nucleus	29.68	34.97
Solyc10g086530.1.1	Tomato	cytosol	36.89	34.95
PGSC0003DMT400069949	Potato	cytosol	36.2	34.94
VIT_13s0019g01810.t01	Wine grape	cytosol	36.06	34.76
CDX79750	Canola	peroxisome	32.45	34.72
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	31.07	34.67
CDY33040	Canola	nucleus	28.71	34.67
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	32.32	34.62
CDY07777	Canola	cytosol, nucleus, peroxisome	32.32	34.62
TraesCS1B01G037200.1	Wheat	nucleus	36.34	34.61
TraesCS4B01G140800.1	Wheat	cytosol	28.29	34.52
KRH24780	Soybean	cytosol	31.48	34.39
KRH65839	Soybean	cytosol, plastid	34.81	34.38
CDY47878	Canola	nucleus	32.87	34.3
KRH29773	Soybean	cytosol	29.13	34.2
AT5G59450.1	Thale cress	nucleus	28.85	34.1
TraesCS5B01G138100.1	Wheat	cytosol, plastid	36.62	34.02
Bra028390.1-P	Field mustard	cytosol	33.15	33.85
Bra033813.1-P	Field mustard	nucleus	27.32	33.85
PGSC0003DMT400022997	Potato	cytosol, plastid	35.64	33.77
Solyc09g010920.1.1	Tomato	cytosol	35.64	33.77
VIT_06s0004g04970.t01	Wine grape	cytosol	30.79	33.74
TraesCS4B01G336200.1	Wheat	cytosol	27.32	33.73
AT3G46600.1	Thale cress	cytosol	27.18	33.62
KRH29774	Soybean	cytosol	29.4	33.6
AT2G37650.1	Thale cress	cytosol	33.43	33.57
KRH49113	Soybean	cytosol	34.12	33.52
KRG99969	Soybean	cytosol	34.26	33.51
TraesCS4B01G141200.1	Wheat	cytosol	26.35	33.51
CDX86475	Canola	nucleus	32.87	33.38
VIT_13s0019g01710.t01	Wine grape	cytosol	33.56	33.29
AT2G29060.1	Thale cress	cytosol	32.04	33.29
KRH24773	Soybean	nucleus	31.62	33.19
Solyc01g100200.2.1	Tomato	nucleus	30.65	33.18
KRH23095	Soybean	cytosol	30.24	33.18
VIT_06s0004g04980.t01	Wine grape	nucleus	32.32	33.1
CDY06266	Canola	cytosol	28.99	33.07
CDX77228	Canola	cytosol	30.65	32.89
CDX82987	Canola	nucleus	27.32	32.78
Solyc06g082530.1.1	Tomato	cytosol	29.68	32.77
KRH23094	Soybean	cytosol	25.1	32.73
KRH29775	Soybean	nucleus	30.51	32.69
VIT_13s0019g01790.t01	Wine grape	cytosol	32.59	32.68
VIT_13s0019g01700.t01	Wine grape	cytosol	34.4	32.63
VIT_06s0004g04950.t01	Wine grape	cytosol	34.12	32.63
KRH29771	Soybean	cytosol	30.65	32.5
GSMUA_AchrUn_...	Banana	cytosol	29.54	32.32
CDY15616	Canola	nucleus	32.04	32.31
TraesCS4B01G141100.1	Wheat	cytosol	28.16	32.27
KRH24778	Soybean	nucleus	30.1	32.1
PGSC0003DMT400078286	Potato	nucleus	29.68	32.08
Bra030688.1-P	Field mustard	nucleus	33.01	32.03
Bra035653.1-P	Field mustard	cytosol	31.9	31.86
CDY31749	Canola	cytosol	31.9	31.68
KRH24775	Soybean	cytosol	29.68	31.47
TraesCS4B01G141400.1	Wheat	cytosol	28.85	31.47
Solyc06g076280.1.1	Tomato	cytosol	32.45	31.28
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	32.18	31.22
Bra031581.1-P	Field mustard	cytosol	28.85	31.14
KRH23089	Soybean	cytosol	27.74	31.06
TraesCS4B01G141300.1	Wheat	cytosol	28.99	31.01
CDY06265	Canola	cytosol	29.54	30.87
PGSC0003DMT400077972	Potato	cytosol	32.18	30.85
KRH10241	Soybean	cytosol, nucleus, peroxisome	29.4	30.81
TraesCS3B01G392600.1	Wheat	cytosol	34.81	30.8
Bra031580.1-P	Field mustard	cytosol	29.4	30.72
AT1G07530.1	Thale cress	cytosol	32.73	30.69
KRH29779	Soybean	cytosol	31.48	30.59
KRH23090	Soybean	vacuole	26.21	30.43
AT1G07520.3	Thale cress	cytosol	29.26	30.32
KRH10243	Soybean	nucleus	27.74	30.08
CDY09912	Canola	cytosol	29.13	30.0
CDX68388	Canola	cytosol	16.92	29.47
TraesCS7B01G077800.1	Wheat	cytosol	29.54	28.98
VIT_06s0004g04960.t01	Wine grape	nucleus	31.9	28.86
TraesCS7B01G078300.1	Wheat	cytosol	28.99	28.32
CDY09911	Canola	nucleus	21.64	26.71
TraesCS4B01G141500.1	Wheat	peroxisome	29.54	26.39
TraesCS2B01G217500.1	Wheat	cytosol	17.89	23.29
TraesCS3B01G441600.1	Wheat	cytosol	16.78	21.92
TraesCS4B01G266700.1	Wheat	cytosol	15.67	21.04
TraesCS2B01G239400.1	Wheat	cytosol	16.37	20.7
TraesCS2B01G413500.1	Wheat	cytosol	13.87	15.85

Protein Annotations

EnsemblPlants:TraesCS3B01G080900.1	EnsemblPlantsGene:TraesCS3B01G080900	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636	PANTHER:PTHR31636:SF60
PFAM:PF03514	PFscan:PS50985	SEG:seg	MapMan:15.5.12	:	:

Description

No Description!

Coordinates

chr3B:+:51143444..51145609

Molecular Weight (calculated)

81517.2 Da

IEP (calculated)

8.172

GRAVY (calculated)

-0.469

Length

721 amino acids

Sequence
(BLAST)

001: MGTSDKPSSA DFHGIMANTA CCSAYCSQDF IESSTAKYNH SEFILHPPTP MSNYPALSIA ANKIAPQFCN VSCDDTSAGC RLTSVVEHPR TDSDVTLSYI
101: EQMLMQDIDD KVRAPHGETA IRTMEEPFYE LLGQKYPVLP DVTLCGCGRL ENLNGNGSSL NGQVCCNCSV YVSSDDYHPN ENSQTSQAPW TLSTTVGEAK
201: QFPLGAERME IGLNINGLSI AKKPSRDYHS PHMNNRDTMK DASFEVRGRK VYPGIEELDL LEGRRKKQIA FSSDEPARNE AFDKVLLCSD QKPIDEGIIS
301: QRTMADTSTK YAQKDQGRKP ARQKKGGKTR KKKEVVDLRT LLIHCAQAVS VNNHSLASDI LKSIRHHSSP SGDDTQSLAF YLADCLEIRM SGNGSQINRN
401: FITTPRSAAY ILKLFHLCFT VSHYLKSSYY FSNKTILDVS KGKSHVHIID FGICFGFQWP SLLKQFADRE GGPPKLRITG IELPMPGFRP DGRKNSTQLR
501: LLEYAGMFKV PLEYRQISSK WESISIEDLN INKGEVLVVN CINRMKNIAD ETISINSARN RVLNTIKMMK PRVFIHGVVN GYYNNPFFLS RFKEVMHHYA
601: SLFDMLDKTT PRDNETRLIL ERDIYKYEIL NVIACEGSER IERPESYKEW KVRSLRARFE QLPLNPKIVK GIQHIVRQIY HKDLFVDEEG QFLVLGWKGR
701: IVYALSTWKP SESNNEGTAD I

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.