Factsheet for TraesCS1B01G037200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G037300.1	Wheat	cytosol	68.69	73.86
TraesCS1B01G037400.1	Wheat	cytosol	67.9	71.09
TraesCS1B01G037500.1	Wheat	cytosol	38.57	70.7
Zm00001d035670_P001	Maize	cytosol	49.27	51.38
EES18880	Sorghum	cytosol	49.93	51.01
EES18882	Sorghum	cytosol	47.95	49.52
VIT_06s0004g04990.t01	Wine grape	cytosol	25.36	43.44
Solyc04g011630.1.1	Tomato	cytosol	9.64	42.94
GSMUA_Achr8P02550_001	Banana	nucleus	20.87	40.31
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	16.12	38.49
PGSC0003DMT400005480	Potato	cytosol	24.7	38.4
CDX80265	Canola	endoplasmic reticulum, golgi	15.98	38.17
GSMUA_Achr6P34090_001	Banana	nucleus	30.38	37.58
TraesCS3B01G081100.1	Wheat	nucleus	35.4	37.48
PGSC0003DMT400049420	Potato	cytosol	32.76	37.35
TraesCS3B01G081000.1	Wheat	cytosol	35.8	37.23
TraesCS3B01G080900.1	Wheat	nucleus	34.61	36.34
KRH24780	Soybean	cytosol	31.18	35.76
CDY71578	Canola	nucleus, plastid	24.57	35.7
TraesCS5B01G494500.1	Wheat	cytosol	30.91	35.62
KRH10240	Soybean	cytosol	28.4	35.48
KRH23095	Soybean	cytosol	30.78	35.46
VIT_06s0004g04970.t01	Wine grape	cytosol	30.78	35.41
KRH65839	Soybean	cytosol, plastid	34.08	35.34
KRH29773	Soybean	cytosol	28.67	35.34
KRH49113	Soybean	cytosol	34.21	35.29
KRG99969	Soybean	cytosol	34.08	35.01
PGSC0003DMT400069949	Potato	cytosol	34.48	34.94
KRH29771	Soybean	cytosol	31.31	34.85
PGSC0003DMT400016258	Potato	cytosol	33.42	34.75
Solyc05g053090.1.1	Tomato	cytosol	34.08	34.72
VIT_13s0019g01780.t01	Wine grape	nucleus	27.48	34.67
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	32.36	34.56
TraesCS4B01G141100.1	Wheat	cytosol	28.4	34.18
KRH29774	Soybean	cytosol	28.4	34.07
VIT_13s0019g01810.t01	Wine grape	cytosol	33.42	33.82
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	28.14	33.81
KRH24773	Soybean	nucleus	30.52	33.62
Solyc10g086530.1.1	Tomato	cytosol	33.69	33.51
Bra033813.1-P	Field mustard	nucleus	25.76	33.51
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	29.72	33.43
CDY07777	Canola	cytosol, nucleus, peroxisome	29.72	33.43
VIT_13s0019g01710.t01	Wine grape	cytosol	32.1	33.42
CDX79750	Canola	peroxisome	29.72	33.38
TraesCS5B01G138100.1	Wheat	cytosol, plastid	34.21	33.38
TraesCS4B01G141200.1	Wheat	cytosol	24.97	33.33
PGSC0003DMT400022997	Potato	cytosol, plastid	33.42	33.25
Solyc09g010920.1.1	Tomato	cytosol	33.42	33.25
GSMUA_AchrUn_...	Banana	cytosol	28.93	33.23
CDY47877	Canola	nucleus	27.08	33.17
CDX68388	Canola	cytosol	18.1	33.09
KRH24775	Soybean	cytosol	29.72	33.09
Bra028391.1-P	Field mustard	nucleus	27.08	33.06
TraesCS4B01G141400.1	Wheat	cytosol	28.67	32.83
AT3G46600.1	Thale cress	cytosol	25.23	32.76
KRH10241	Soybean	cytosol, nucleus, peroxisome	29.72	32.7
CDY39530	Canola	cytosol	26.68	32.63
CDX82987	Canola	nucleus	25.89	32.61
Bra015584.1-P	Field mustard	cytosol	18.76	32.57
KRH23094	Soybean	cytosol	23.78	32.55
KRH29775	Soybean	nucleus	28.93	32.54
VIT_06s0004g04980.t01	Wine grape	nucleus	30.25	32.53
TraesCS4B01G336200.1	Wheat	cytosol	24.97	32.36
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	27.61	32.35
TraesCS4B01G140800.1	Wheat	cytosol	25.23	32.32
CDY47878	Canola	nucleus	29.46	32.27
CDX86475	Canola	nucleus	30.25	32.25
KRH29779	Soybean	cytosol	31.57	32.21
KRH10243	Soybean	nucleus	28.27	32.18
CDY33040	Canola	nucleus	25.36	32.16
KRH24778	Soybean	nucleus	28.67	32.1
VIT_06s0004g04950.t01	Wine grape	cytosol	31.97	32.1
TraesCS4B01G141300.1	Wheat	cytosol	28.53	32.05
KRH23089	Soybean	cytosol	27.08	31.83
Bra028390.1-P	Field mustard	cytosol	29.59	31.73
AT2G29060.1	Thale cress	cytosol	29.06	31.7
Solyc06g082530.1.1	Tomato	cytosol	27.34	31.7
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	31.04	31.63
AT5G59450.1	Thale cress	nucleus	25.36	31.48
PGSC0003DMT400077972	Potato	cytosol	31.18	31.38
Solyc01g100200.2.1	Tomato	nucleus	27.61	31.38
Bra030688.1-P	Field mustard	nucleus	30.78	31.36
AT2G37650.1	Thale cress	cytosol	29.72	31.34
VIT_13s0019g01790.t01	Wine grape	cytosol	29.72	31.29
Solyc06g076280.1.1	Tomato	cytosol	30.91	31.28
TraesCS3B01G392600.1	Wheat	cytosol	33.55	31.17
VIT_13s0019g01700.t01	Wine grape	cytosol	31.04	30.92
CDY15616	Canola	nucleus	29.19	30.91
PGSC0003DMT400078286	Potato	nucleus	27.21	30.88
VIT_06s0004g04960.t01	Wine grape	nucleus	32.36	30.74
CDY06266	Canola	cytosol	25.5	30.54
AT1G07530.1	Thale cress	cytosol	30.91	30.43
TraesCS7B01G077800.1	Wheat	cytosol	29.33	30.2
KRH23090	Soybean	vacuole	24.7	30.11
CDX77228	Canola	cytosol	26.68	30.06
Bra035653.1-P	Field mustard	cytosol	28.67	30.06
CDY31749	Canola	cytosol	28.67	29.89
TraesCS7B01G078300.1	Wheat	cytosol	29.06	29.81
CDX68389	Canola	cytosol	3.3	29.41
Bra031581.1-P	Field mustard	cytosol	25.76	29.19
Bra031580.1-P	Field mustard	cytosol	26.55	29.13
CDY06265	Canola	cytosol	26.55	29.13
AT1G07520.3	Thale cress	cytosol	26.29	28.59
CDY09912	Canola	cytosol	26.29	28.43
TraesCS4B01G141500.1	Wheat	peroxisome	29.72	27.88
CDY09911	Canola	nucleus	19.95	25.86
TraesCS2B01G217500.1	Wheat	cytosol	17.17	23.47
TraesCS4B01G266700.1	Wheat	cytosol	15.32	21.6
TraesCS3B01G441600.1	Wheat	cytosol	15.19	20.83
TraesCS2B01G239400.1	Wheat	cytosol	15.32	20.35
TraesCS2B01G413500.1	Wheat	cytosol	14.13	16.96

Protein Annotations

EnsemblPlants:TraesCS1B01G037200.1	EnsemblPlantsGene:TraesCS1B01G037200	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636	PANTHER:PTHR31636:SF14
PFAM:PF03514	PFscan:PS50985	SEG:seg	MapMan:15.5.12	:	:

Description

No Description!

Coordinates

chr1B:-:17734729..17738805

Molecular Weight (calculated)

85743.1 Da

IEP (calculated)

7.994

GRAVY (calculated)

-0.496

Length

757 amino acids

Sequence
(BLAST)

001: MATEPLHDNV DNVAATDESD SSSQQQLTVY NYDLSGPQSK VLSPANQEST YLLGGITDPG LCSNKSSLGQ NQFQISPGSS PEHRQIRSND ALHYISQMLM
101: EDVDERVNIC QGEAALQDAE KPFRDILGEV CESATNWPPL HTNNKPDDSH KSGTSRYKRL WTTSFSNDYS SYNVIQPLAT PLSPYMYNRS LFLPNQPLTS
201: LGCASRSDFS AMHCQRGVEE ENRFAASIVK LMIYLKNDIL YISQLTTKAK VGKMSENAIF EVADQRGWDT FQGRSNKHHA ITTCAIIRNE NFDRVLLCYG
301: QKSLDGITRL RERMAGEGNK NSLKSRSKGR KKLWVRKQPR KELVDLRTLL IHCAEAMAKD NHLLANDLLK KIRRHSSADG DCTQRLAFYL VDGLEARLAG
401: IGSQVYRNLV ERRTSTTDWL EAYSLFLEAC PFKRVSYNFA NQTILDVSQR QPRVHIVDYG ISFGFQWPSM IQRFARREEG APRLRITGIE APQPGFRSCQ
501: MIEETGKRLA DYANMFKVPF QYQGIATSRW ETIKIEDLNI EEDEVLVINC IFRMKNLGHE TESINSARDE VLKIMRRMNP KVFISGTMNG LHSSPFFIQR
601: FKEVMLHYSS MFDMLDANVP RDNEAREMIE RIIFGRDALN IIACEDAERT RPESYRQWQA RFLKAGFQQL PVEQAVLEKI IAVGCYKDGK GEREEIGGYK
701: AWAGIGLAAR VKGWGEKRGR ESVAVAAVLL RFERPLFSDS SSGCGDPPPP PPMCSCS

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.