Factsheet for TraesCS3B01G081000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G067800.1	Wheat	nucleus	83.79	90.24
TraesCS3B01G080900.1	Wheat	nucleus	80.08	80.86
TraesCS3B01G081100.1	Wheat	nucleus	75.96	77.34
OQU91407	Sorghum	nucleus	50.27	53.35
EER91260	Sorghum	nucleus	52.75	53.26
KXG38064	Sorghum	nucleus	52.34	52.92
OQU91406	Sorghum	nucleus	53.85	52.41
Zm00001d033166_P001	Maize	nucleus	52.47	52.19
Solyc04g011630.1.1	Tomato	cytosol	11.54	49.41
TraesCS1B01G037500.1	Wheat	cytosol	27.61	48.67
CDX68389	Canola	cytosol	5.63	48.24
VIT_06s0004g04990.t01	Wine grape	cytosol	27.06	44.57
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	18.96	43.53
CDX80265	Canola	endoplasmic reticulum, golgi	18.82	43.22
TraesCS1B01G037300.1	Wheat	cytosol	38.6	39.91
PGSC0003DMT400005480	Potato	cytosol	26.24	39.22
TraesCS1B01G037400.1	Wheat	cytosol	38.05	38.31
PGSC0003DMT400049420	Potato	cytosol	34.75	38.1
GSMUA_Achr8P02550_001	Banana	nucleus	20.05	37.24
KRH10240	Soybean	cytosol	30.91	37.13
CDY71578	Canola	nucleus, plastid	26.51	37.04
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	35.85	36.81
VIT_13s0019g01780.t01	Wine grape	nucleus	29.95	36.33
TraesCS1B01G037200.1	Wheat	nucleus	37.23	35.8
Bra015584.1-P	Field mustard	cytosol	21.43	35.78
TraesCS5B01G494500.1	Wheat	cytosol	32.28	35.77
Bra028391.1-P	Field mustard	nucleus	30.22	35.48
GSMUA_Achr6P34090_001	Banana	nucleus	29.81	35.46
CDY47877	Canola	nucleus	30.08	35.44
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	30.49	35.24
CDY39530	Canola	cytosol	29.95	35.22
VIT_13s0019g01810.t01	Wine grape	cytosol	35.99	35.03
CDY33040	Canola	nucleus	28.71	35.01
PGSC0003DMT400016258	Potato	cytosol	34.89	34.89
Solyc10g086530.1.1	Tomato	cytosol	36.4	34.82
PGSC0003DMT400069949	Potato	cytosol	35.71	34.81
Solyc05g053090.1.1	Tomato	cytosol	35.3	34.59
KRH24780	Soybean	cytosol	31.32	34.55
PGSC0003DMT400022997	Potato	cytosol, plastid	35.99	34.43
Solyc09g010920.1.1	Tomato	cytosol	35.99	34.43
TraesCS5B01G138100.1	Wheat	cytosol, plastid	36.68	34.41
KRH65839	Soybean	cytosol, plastid	34.48	34.38
KRH29773	Soybean	cytosol	28.98	34.36
KRH49113	Soybean	cytosol	34.62	34.33
KRG99969	Soybean	cytosol	34.75	34.33
KRH23095	Soybean	cytosol	30.91	34.25
KRH24773	Soybean	nucleus	32.28	34.21
CDX79750	Canola	peroxisome	31.59	34.12
KRH29774	Soybean	cytosol	29.53	34.07
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	30.22	34.06
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	31.46	34.03
CDY07777	Canola	cytosol, nucleus, peroxisome	31.46	34.03
KRH23094	Soybean	cytosol	25.82	34.0
VIT_06s0004g04970.t01	Wine grape	cytosol	30.63	33.89
Bra033813.1-P	Field mustard	nucleus	27.06	33.85
AT3G46600.1	Thale cress	cytosol	27.06	33.79
TraesCS4B01G140800.1	Wheat	cytosol	27.34	33.67
AT5G59450.1	Thale cress	nucleus	28.16	33.61
KRH29775	Soybean	nucleus	31.04	33.58
TraesCS4B01G336200.1	Wheat	cytosol	26.92	33.56
TraesCS4B01G141200.1	Wheat	cytosol	26.1	33.51
VIT_13s0019g01710.t01	Wine grape	cytosol	33.1	33.15
CDX82987	Canola	nucleus	27.34	33.11
VIT_13s0019g01700.t01	Wine grape	cytosol	34.48	33.03
CDY47878	Canola	nucleus	31.32	33.0
VIT_06s0004g04980.t01	Wine grape	nucleus	31.87	32.95
KRH29771	Soybean	cytosol	30.77	32.94
CDY06266	Canola	cytosol	28.43	32.75
VIT_13s0019g01790.t01	Wine grape	cytosol	32.28	32.68
TraesCS4B01G141100.1	Wheat	cytosol	28.16	32.59
Bra028390.1-P	Field mustard	cytosol	31.59	32.58
AT2G29060.1	Thale cress	cytosol	31.04	32.56
CDX86475	Canola	nucleus	31.73	32.54
VIT_06s0004g04950.t01	Wine grape	cytosol	33.65	32.49
AT2G37650.1	Thale cress	cytosol	32.01	32.45
KRH24778	Soybean	nucleus	30.08	32.4
Solyc06g082530.1.1	Tomato	cytosol	28.98	32.31
Solyc01g100200.2.1	Tomato	nucleus	29.53	32.28
CDX77228	Canola	cytosol	29.67	32.14
KRH24775	Soybean	cytosol	29.95	32.06
Solyc06g076280.1.1	Tomato	cytosol	32.83	31.95
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	32.42	31.76
CDY15616	Canola	nucleus	31.18	31.75
GSMUA_AchrUn_...	Banana	cytosol	28.71	31.71
PGSC0003DMT400077972	Potato	cytosol	32.69	31.65
PGSC0003DMT400078286	Potato	nucleus	28.98	31.63
Bra035653.1-P	Field mustard	cytosol	31.18	31.44
Bra030688.1-P	Field mustard	nucleus	32.01	31.36
CDY31749	Canola	cytosol	31.18	31.27
KRH10241	Soybean	cytosol, nucleus, peroxisome	29.53	31.25
TraesCS4B01G141400.1	Wheat	cytosol	28.3	31.16
TraesCS4B01G141300.1	Wheat	cytosol	28.71	31.01
KRH29779	Soybean	cytosol	31.46	30.86
Bra031581.1-P	Field mustard	cytosol	28.3	30.84
KRH23089	Soybean	cytosol	27.2	30.75
KRH10243	Soybean	nucleus	28.02	30.68
CDX68388	Canola	cytosol	17.45	30.68
KRH23090	Soybean	vacuole	25.96	30.43
TraesCS3B01G392600.1	Wheat	cytosol	33.93	30.31
CDY06265	Canola	cytosol	28.57	30.14
Bra031580.1-P	Field mustard	cytosol	28.43	30.0
AT1G07520.3	Thale cress	cytosol	28.3	29.6
CDY09912	Canola	cytosol	28.3	29.43
AT1G07530.1	Thale cress	cytosol	31.04	29.39
TraesCS7B01G077800.1	Wheat	cytosol	29.67	29.39
VIT_06s0004g04960.t01	Wine grape	nucleus	31.59	28.86
TraesCS7B01G078300.1	Wheat	cytosol	28.98	28.59
TraesCS4B01G141500.1	Wheat	peroxisome	29.81	26.89
CDY09911	Canola	nucleus	21.15	26.37
TraesCS2B01G217500.1	Wheat	cytosol	17.72	23.29
TraesCS3B01G441600.1	Wheat	cytosol	17.17	22.64
TraesCS4B01G266700.1	Wheat	cytosol	16.07	21.79
TraesCS2B01G239400.1	Wheat	cytosol	16.07	20.53
TraesCS2B01G413500.1	Wheat	cytosol	13.87	16.01

Protein Annotations

EnsemblPlants:TraesCS3B01G081000.1	EnsemblPlantsGene:TraesCS3B01G081000	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636	PANTHER:PTHR31636:SF60
PFAM:PF03514	PFscan:PS50985	MapMan:15.5.12	:	:	:

Description

No Description!

Coordinates

chr3B:+:51148809..51150995

Molecular Weight (calculated)

82785.8 Da

IEP (calculated)

7.385

GRAVY (calculated)

-0.457

Length

728 amino acids

Sequence
(BLAST)

001: MSIIKSIMGT SDKPSSADFH NIMANTAGCG ACSSQDPMSS TAEYNHSEFV LHPPTPMSYS PAVSIVSSKI GPQLCNVSCD DPSAGWRLIS VAEHPRTDSD
101: VTLSYIEQML MQDTDDKVRA AHGETAIKTV EETFYEVLGQ KYPVLPDILP PCGCDRLKNL NGNVSRPNGK LCSNCSLYIS SDDYHPNENS QASQAPWTLS
201: AIVGEAKKIP LGAEKIEIGL NINSLSIAKK PSRDNHSPHM NEKETIKDAS FEVRGRKVFL DKENLDLLEG RRNKQTAIFS DEPIRNEAFD RVLLCSELKP
301: VHEDIIFQRA MADTSTKYAM KDQGRKLDRQ TTRGKTRKKQ EVVDLRTLLI HCAEAVFRNN HSLASEILKS IRQHSSPSGD DTQRLAFYLA DCLEIRLSGN
401: GSQINQNFIA IPRNAEYILK LFHLGLTVSP YLRSSYYFSN KTILDVTKGK PQVHIIDFGI CFGFQWPSLL KQFADREGGP PKLRITGIEL PTPGFRPDEM
501: NNNTRLRLIE YANMFKVPFE YRQISSKWES ITIKDFNIDK DELLVVNCIH RMKNLGDETT SINSARNRVL NNIRMMKPNI FIHGVVNGSY NTPFFLSRFK
601: EVMYRYTSLF DMLDKTTPRD NETRLILERD IYKYEILNAI ACEGSERIER PESYKIWKVR GLRARFEQLP LNPTIVNGIQ HIVRQIYHKE VFVDEEDQFL
701: VLGWKGRILY ALSTWKPSEI DNEGTDDI

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.