Factsheet for TraesCS1B01G037400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G030800.1	Wheat	cytosol	87.0	89.73
TraesCS1A01G030300.1	Wheat	cytosol	85.06	87.11
TraesCS1B01G037500.1	Wheat	cytosol	45.5	79.66
TraesCS1B01G037300.1	Wheat	cytosol	73.31	75.28
TraesCS1B01G037200.1	Wheat	nucleus	71.09	67.9
Zm00001d035670_P001	Maize	cytosol	52.14	51.93
EES18880	Sorghum	cytosol	52.7	51.42
EES18882	Sorghum	cytosol	51.18	50.48
Solyc04g011630.1.1	Tomato	cytosol	11.62	49.41
VIT_06s0004g04990.t01	Wine grape	cytosol	28.08	45.93
CDX68389	Canola	cytosol	5.39	45.88
GSMUA_Achr8P02550_001	Banana	nucleus	23.93	44.13
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	18.26	41.64
CDX80265	Canola	endoplasmic reticulum, golgi	18.12	41.32
PGSC0003DMT400005480	Potato	cytosol	27.25	40.45
GSMUA_Achr6P34090_001	Banana	nucleus	33.89	40.03
TraesCS3B01G081100.1	Wheat	nucleus	37.9	38.32
PGSC0003DMT400049420	Potato	cytosol	35.13	38.25
TraesCS3B01G081000.1	Wheat	cytosol	38.31	38.05
KRH24780	Soybean	cytosol	34.58	37.88
KRH10240	Soybean	cytosol	31.54	37.62
TraesCS5B01G494500.1	Wheat	cytosol	33.61	36.99
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	32.23	36.98
TraesCS3B01G080900.1	Wheat	nucleus	36.79	36.89
CDY47877	Canola	nucleus	31.4	36.73
VIT_13s0019g01780.t01	Wine grape	nucleus	30.43	36.67
KRH49113	Soybean	cytosol	37.21	36.65
CDY71578	Canola	nucleus, plastid	26.28	36.47
Bra028391.1-P	Field mustard	nucleus	31.26	36.45
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	35.68	36.39
KRG99969	Soybean	cytosol	36.93	36.23
KRH23095	Soybean	cytosol	32.92	36.23
CDY39530	Canola	cytosol	30.98	36.19
VIT_06s0004g04970.t01	Wine grape	cytosol	32.92	36.17
KRH29773	Soybean	cytosol	30.71	36.16
KRH65839	Soybean	cytosol, plastid	36.38	36.03
PGSC0003DMT400016258	Potato	cytosol	36.24	35.99
Bra033813.1-P	Field mustard	nucleus	28.91	35.91
KRH29771	Soybean	cytosol	33.61	35.74
TraesCS4B01G141100.1	Wheat	cytosol	30.98	35.61
CDX79750	Canola	peroxisome	33.06	35.46
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	32.92	35.36
CDY07777	Canola	cytosol, nucleus, peroxisome	32.92	35.36
VIT_13s0019g01810.t01	Wine grape	cytosol	36.51	35.29
CDX82987	Canola	nucleus	29.32	35.27
Solyc05g053090.1.1	Tomato	cytosol	36.24	35.26
PGSC0003DMT400022997	Potato	cytosol, plastid	36.93	35.09
Solyc09g010920.1.1	Tomato	cytosol	36.93	35.09
KRH23094	Soybean	cytosol	26.83	35.08
PGSC0003DMT400069949	Potato	cytosol	36.24	35.07
TraesCS5B01G138100.1	Wheat	cytosol, plastid	37.62	35.05
KRH29774	Soybean	cytosol	30.57	35.02
TraesCS4B01G141200.1	Wheat	cytosol	27.39	34.92
KRH10243	Soybean	nucleus	32.09	34.89
AT3G46600.1	Thale cress	cytosol	28.08	34.82
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	30.98	34.67
KRH24773	Soybean	nucleus	32.78	34.5
VIT_13s0019g01710.t01	Wine grape	cytosol	34.58	34.39
GSMUA_AchrUn_...	Banana	cytosol	31.26	34.29
KRH29779	Soybean	cytosol	35.13	34.23
Solyc10g086530.1.1	Tomato	cytosol	35.96	34.17
KRH23089	Soybean	cytosol	30.43	34.16
KRH24775	Soybean	cytosol	32.09	34.12
VIT_06s0004g04950.t01	Wine grape	cytosol	35.41	33.95
Bra015584.1-P	Field mustard	cytosol	20.47	33.95
TraesCS4B01G140800.1	Wheat	cytosol	27.66	33.84
CDY33040	Canola	nucleus	27.94	33.84
VIT_13s0019g01790.t01	Wine grape	cytosol	33.47	33.66
VIT_13s0019g01700.t01	Wine grape	cytosol	35.27	33.55
Solyc06g082530.1.1	Tomato	cytosol	30.29	33.54
VIT_06s0004g04980.t01	Wine grape	nucleus	32.64	33.52
Solyc01g100200.2.1	Tomato	nucleus	30.84	33.48
KRH29775	Soybean	nucleus	31.12	33.43
KRH24778	Soybean	nucleus	31.26	33.43
KRH23090	Soybean	vacuole	28.63	33.33
TraesCS4B01G336200.1	Wheat	cytosol	26.83	33.22
AT2G37650.1	Thale cress	cytosol	32.92	33.15
TraesCS3B01G392600.1	Wheat	cytosol	37.21	33.01
CDY47878	Canola	nucleus	31.4	32.85
CDX68388	Canola	cytosol	18.81	32.85
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	33.75	32.84
CDX86475	Canola	nucleus	32.23	32.82
AT5G59450.1	Thale cress	nucleus	27.66	32.79
KRH10241	Soybean	cytosol, nucleus, peroxisome	31.12	32.7
PGSC0003DMT400078286	Potato	nucleus	30.01	32.53
Bra028390.1-P	Field mustard	cytosol	31.54	32.29
CDY06266	Canola	cytosol	28.22	32.28
TraesCS4B01G141400.1	Wheat	cytosol	29.46	32.22
AT2G29060.1	Thale cress	cytosol	30.71	31.99
PGSC0003DMT400077972	Potato	cytosol	33.2	31.91
Solyc06g076280.1.1	Tomato	cytosol	32.92	31.82
TraesCS7B01G077800.1	Wheat	cytosol	32.09	31.56
CDX77228	Canola	cytosol	29.32	31.55
Bra030688.1-P	Field mustard	nucleus	32.37	31.49
TraesCS4B01G141300.1	Wheat	cytosol	29.18	31.31
CDY15616	Canola	nucleus	30.84	31.19
TraesCS7B01G078300.1	Wheat	cytosol	31.81	31.17
AT1G07520.3	Thale cress	cytosol	29.88	31.03
CDY31749	Canola	cytosol	30.98	30.85
Bra035653.1-P	Field mustard	cytosol	30.71	30.75
Bra031581.1-P	Field mustard	cytosol	28.35	30.69
VIT_06s0004g04960.t01	Wine grape	nucleus	33.75	30.61
AT1G07530.1	Thale cress	cytosol	32.5	30.56
Bra031580.1-P	Field mustard	cytosol	29.05	30.43
CDY06265	Canola	cytosol	29.05	30.43
CDY09912	Canola	cytosol	28.91	29.86
TraesCS4B01G141500.1	Wheat	peroxisome	32.09	28.75
CDY09911	Canola	nucleus	21.72	26.88
TraesCS2B01G217500.1	Wheat	cytosol	18.4	24.01
TraesCS4B01G266700.1	Wheat	cytosol	17.15	23.09
TraesCS2B01G239400.1	Wheat	cytosol	17.7	22.46
TraesCS3B01G441600.1	Wheat	cytosol	16.74	21.92
TraesCS2B01G413500.1	Wheat	cytosol	15.49	17.75

Protein Annotations

EnsemblPlants:TraesCS1B01G037400.1	EnsemblPlantsGene:TraesCS1B01G037400	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636	PANTHER:PTHR31636:SF14
PFAM:PF03514	PFscan:PS50985	MapMan:15.5.12	:	:	:

Description

No Description!

Coordinates

chr1B:-:17767001..17771112

Molecular Weight (calculated)

81734.3 Da

IEP (calculated)

7.688

GRAVY (calculated)

-0.398

Length

723 amino acids

Sequence
(BLAST)

001: MAIEPLRDNL DNLAATAQPY GDSSSHQQLT VYNYDLSGPL STVLSPANQV SINSSHGQNK FQIAAGGSPE HRRIRSNDAL HYISQMLMED VDEEVDICQG
101: AALQATEKPF RDILGEVYVS PTNWPPLHSN NKPDNPDKDY SSYNVLQPSA TPLCPYICNR SPFLPNQPLI SVGWTSGSGF PALHGQRGVG EERTFAPSID
201: KLVIYSKNNI VYISQLTTKA KVRERTENTI FEVSDLRAWD IFQGRSNKHH AITTCAIIRN ENFDKVLLCY GHSGRITRLE ERMAGEGNKT SLKGRSRSRK
301: QPRKELVDLR TLLIHCAQAV AEHSYLLASE LLLKIRHHSS ADGDCTQRLA FYLADGLKSR LAGTGSQVYR NLVERRTSTV DWLEAYSLFL AAFPFGRASY
401: YFANQAILDV SQGKPRVHIV DFGIGFGFQW PLMIQNFAQQ EEGAPKLRIT GIDVPQPGFR PCEMIEETGK RLADYANRFN VPFQYQGIAA SRWETIKIED
501: LNIDEDEVLI VNCMFRMKNL GHETDAVNGA RDKVLKTMWR MNPKIFISGT VNGLLSSPFF IQRFKEVMLY YSSIFDMLDA NVPRDNEARK MIERILFGQD
601: ALNIIACEGA DRTERPECYR QWQARCLKAG FQQLPVDPAI LKNIVHRKKL LFHEEFFAVE DCGWLLQGWK GRVLYALSKW KPNETYEDHY LHDSEHNGSK
701: LLNNILKCAT GIRCTGSTTS TGA

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.