Factsheet for TraesCS1B01G037500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g011630.1.1	Tomato	cytosol	19.85	48.24
TraesCS1B01G037300.1	Wheat	cytosol	79.9	46.88
TraesCS1B01G037400.1	Wheat	cytosol	79.66	45.5
TraesCS1D01G031200.1	Wheat	cytosol	79.9	45.27
VIT_06s0004g04990.t01	Wine grape	cytosol	47.94	44.8
CDX68389	Canola	cytosol	8.96	43.53
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	30.02	39.12
CDX80265	Canola	endoplasmic reticulum, golgi	29.78	38.8
TraesCS1B01G037200.1	Wheat	nucleus	70.7	38.57
PGSC0003DMT400005480	Potato	cytosol	43.1	36.55
Zm00001d035670_P001	Maize	cytosol	59.32	33.75
EES18882	Sorghum	cytosol	59.08	33.29
EES18880	Sorghum	cytosol	59.56	33.2
CDY71578	Canola	nucleus, plastid	41.4	32.82
GSMUA_Achr8P02550_001	Banana	nucleus	29.54	31.12
TraesCS4B01G141100.1	Wheat	cytosol	46.25	30.37
KRH10240	Soybean	cytosol	44.55	30.36
Bra033813.1-P	Field mustard	nucleus	42.37	30.07
GSMUA_Achr6P34090_001	Banana	nucleus	44.55	30.07
VIT_13s0019g01780.t01	Wine grape	nucleus	43.58	30.0
TraesCS5B01G494500.1	Wheat	cytosol	47.7	29.98
PGSC0003DMT400049420	Potato	cytosol	47.94	29.82
VIT_06s0004g04970.t01	Wine grape	cytosol	47.22	29.64
CDX82987	Canola	nucleus	42.62	29.28
TraesCS4B01G141200.1	Wheat	cytosol	40.19	29.28
KRH24780	Soybean	cytosol	46.49	29.09
KRH23095	Soybean	cytosol	46.25	29.07
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	44.31	29.05
Bra015584.1-P	Field mustard	cytosol	30.51	28.9
KRH29771	Soybean	cytosol	47.46	28.82
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	44.79	28.64
KRH65839	Soybean	cytosol, plastid	50.61	28.63
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	48.67	28.35
CDY33040	Canola	nucleus	40.92	28.31
AT3G46600.1	Thale cress	cytosol	39.71	28.13
KRH29774	Soybean	cytosol	42.86	28.05
KRH24773	Soybean	nucleus	46.49	27.95
KRH49113	Soybean	cytosol	49.64	27.93
KRH29773	Soybean	cytosol	41.4	27.85
KRH23094	Soybean	cytosol	37.29	27.85
TraesCS3B01G081100.1	Wheat	nucleus	48.18	27.83
KRG99969	Soybean	cytosol	49.64	27.82
CDX68388	Canola	cytosol	27.84	27.78
TraesCS4B01G140800.1	Wheat	cytosol	39.71	27.75
Solyc01g100200.2.1	Tomato	nucleus	44.55	27.63
TraesCS3B01G081000.1	Wheat	cytosol	48.67	27.61
Solyc06g082530.1.1	Tomato	cytosol	43.58	27.57
AT5G59450.1	Thale cress	nucleus	40.68	27.54
KRH10243	Soybean	nucleus	44.31	27.52
CDY47877	Canola	nucleus	41.16	27.51
VIT_06s0004g04980.t01	Wine grape	nucleus	46.73	27.41
KRH23089	Soybean	cytosol	42.62	27.33
TraesCS5B01G138100.1	Wheat	cytosol, plastid	51.33	27.32
Bra028391.1-P	Field mustard	nucleus	40.92	27.26
PGSC0003DMT400016258	Potato	cytosol	47.94	27.2
TraesCS4B01G336200.1	Wheat	cytosol	38.26	27.05
CDY39530	Canola	cytosol	40.44	26.98
TraesCS4B01G141400.1	Wheat	cytosol	43.1	26.93
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	43.83	26.89
CDY07777	Canola	cytosol, nucleus, peroxisome	43.83	26.89
CDX79750	Canola	peroxisome	43.83	26.85
CDY47878	Canola	nucleus	44.79	26.77
VIT_13s0019g01810.t01	Wine grape	cytosol	48.43	26.74
PGSC0003DMT400078286	Potato	nucleus	43.1	26.69
Solyc05g053090.1.1	Tomato	cytosol	47.94	26.65
TraesCS3B01G080900.1	Wheat	nucleus	46.49	26.63
TraesCS4B01G141300.1	Wheat	cytosol	43.34	26.56
AT2G29060.1	Thale cress	cytosol	44.55	26.51
PGSC0003DMT400069949	Potato	cytosol	47.94	26.51
KRH24775	Soybean	cytosol	43.58	26.47
KRH29775	Soybean	nucleus	43.1	26.45
TraesCS7B01G077800.1	Wheat	cytosol	46.97	26.39
KRH23090	Soybean	vacuole	39.47	26.25
Bra028390.1-P	Field mustard	cytosol	44.79	26.2
PGSC0003DMT400022997	Potato	cytosol, plastid	48.18	26.15
Solyc10g086530.1.1	Tomato	cytosol	48.18	26.15
Solyc09g010920.1.1	Tomato	cytosol	47.7	25.89
VIT_13s0019g01710.t01	Wine grape	cytosol	45.28	25.72
TraesCS7B01G078300.1	Wheat	cytosol	45.76	25.61
KRH29779	Soybean	cytosol	46.0	25.61
VIT_06s0004g04950.t01	Wine grape	cytosol	46.73	25.6
KRH24778	Soybean	nucleus	41.89	25.59
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	45.76	25.44
CDX86475	Canola	nucleus	43.58	25.35
KRH10241	Soybean	cytosol, nucleus, peroxisome	42.13	25.29
VIT_13s0019g01700.t01	Wine grape	cytosol	46.49	25.26
AT2G37650.1	Thale cress	cytosol	43.83	25.21
CDX77228	Canola	cytosol	40.92	25.15
PGSC0003DMT400077972	Potato	cytosol	45.04	24.73
Solyc06g076280.1.1	Tomato	cytosol	44.55	24.6
VIT_13s0019g01790.t01	Wine grape	cytosol	42.62	24.48
GSMUA_AchrUn_...	Banana	cytosol	38.98	24.43
Bra035653.1-P	Field mustard	cytosol	42.62	24.38
Bra030688.1-P	Field mustard	nucleus	43.83	24.36
CDY31749	Canola	cytosol	42.62	24.24
TraesCS3B01G392600.1	Wheat	cytosol	47.7	24.17
CDY06266	Canola	cytosol	36.8	24.05
CDY15616	Canola	nucleus	41.16	23.78
AT1G07530.1	Thale cress	cytosol	43.58	23.41
TraesCS4B01G141500.1	Wheat	peroxisome	45.04	23.05
AT1G07520.3	Thale cress	cytosol	38.5	22.84
Bra031580.1-P	Field mustard	cytosol	37.77	22.61
CDY06265	Canola	cytosol	37.77	22.61
Bra031581.1-P	Field mustard	cytosol	36.56	22.6
VIT_06s0004g04960.t01	Wine grape	nucleus	43.58	22.58
CDY09912	Canola	cytosol	37.53	22.14
TraesCS2B01G217500.1	Wheat	cytosol	27.36	20.4
TraesCS2B01G239400.1	Wheat	cytosol	28.09	20.35
TraesCS3B01G441600.1	Wheat	cytosol	26.63	19.93
TraesCS4B01G266700.1	Wheat	cytosol	25.67	19.74
CDY09911	Canola	nucleus	27.12	19.18
TraesCS2B01G413500.1	Wheat	cytosol	22.28	14.58

Protein Annotations

EnsemblPlants:TraesCS1B01G037500.1	EnsemblPlantsGene:TraesCS1B01G037500	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636	PANTHER:PTHR31636:SF14
PFAM:PF03514	PFscan:PS50985	MapMan:15.5.12	:	:	:

Description

No Description!

Coordinates

chr1B:-:17784865..17786106

Molecular Weight (calculated)

47395.0 Da

IEP (calculated)

7.785

GRAVY (calculated)

-0.438

Length

413 amino acids

Sequence
(BLAST)

001: MAEEGNKSSM KGRSKGHQKL WQRKQPRREL VDLGTLLVQC AQAVAEHDHL EASELLKKIR QHSSADGDCT QRLAFYLADG LEARLAGIGS QVYRNLMERR
101: TSTTDWLDAC SHFHSSCPFD RTAHYFASQA ILGVSQGQPR VHIVDFGIGF GLQWPLMIQR FSQQEEGAPK LRITGIDVPQ PGFHPCEMIE ETGKRLADYA
201: NMFKVPFQYQ GIAASRWDTI KIEDLNIDED EVLIINCMFR MKNLGHETEA VNSRDRVLKT MRRMNPKILI LGIVSGLSCS PFFIQRFKEV MFHYSSMFDM
301: LDANFPPPDN KARKMIEKIL FGQDALNIIA CEGAERTERP ESYRQWQARC LKAAFQPLLV DPATLKNIVQ MKNKLSHEEF FVVEDRGWLL QGWKGRVLYA
401: ISKWEPNETH DDK

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.