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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • endoplasmic reticulum 3
  • nucleus 1
  • extracellular 2
  • vacuole 2
  • plasma membrane 2
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX80265 Canola endoplasmic reticulum, golgi 97.79 97.79
CDY33040 Canola nucleus 99.68 52.93
AT5G59450.1 Thale cress nucleus 88.64 46.07
Bra033813.1-P Field mustard nucleus 73.5 40.03
VIT_06s0004g04990.t01 Wine grape cytosol 48.9 35.07
Bra026077.1-P Field mustard cytosol 30.28 32.65
HORVU3Hr1G012520.1 Barley cytosol 43.22 30.04
TraesCS1B01G037500.1 Wheat cytosol 39.12 30.02
Zm00001d034664_P001 Maize plastid 52.68 29.87
PGSC0003DMT400063769 Potato cytosol, nucleus, peroxisome 57.73 28.33
Bra015156.1-P Field mustard cytosol 28.39 28.3
Bra015584.1-P Field mustard cytosol 37.54 27.29
Solyc01g100200.2.1 Tomato nucleus 56.78 27.03
KRH10240 Soybean cytosol 51.42 26.9
KRH23095 Soybean cytosol 53.31 25.72
Solyc06g082530.1.1 Tomato cytosol 52.37 25.42
KXG37250 Sorghum cytosol 52.05 25.35
Bra028391.1-P Field mustard nucleus 49.53 25.32
Os04t0590400-01 Rice cytosol, nucleus, peroxisome 50.79 25.31
VIT_06s0004g04970.t01 Wine grape cytosol 52.37 25.23
PGSC0003DMT400078286 Potato nucleus 53.0 25.19
VIT_06s0004g04980.t01 Wine grape nucleus 55.52 25.0
KRH29771 Soybean cytosol 53.0 24.71
KXG38103 Sorghum cytosol 48.58 24.6
KXG21079 Sorghum cytosol 48.27 24.56
HORVU5Hr1G113620.1 Barley cytosol, nucleus, peroxisome 49.84 24.53
KRH24773 Soybean nucleus 53.0 24.45
Zm00001d035671_P001 Maize cytosol 47.95 24.28
Bra000012.1-P Field mustard cytosol, nucleus, peroxisome 50.79 23.92
TraesCS5A01G481300.1 Wheat cytosol 49.21 23.82
TraesCS5B01G494500.1 Wheat cytosol 49.21 23.74
TraesCS5D01G494900.1 Wheat cytosol 49.21 23.74
KRH23094 Soybean cytosol 40.69 23.33
Zm00001d011070_P001 Maize cytosol 46.06 23.29
HORVU3Hr1G012550.6 Barley cytosol 43.53 23.15
KXG21080 Sorghum cytosol 45.43 23.0
Bra031580.1-P Field mustard cytosol 48.9 22.46
OQU92829 Sorghum cytosol 51.42 22.21
GSMUA_Achr10P... Banana cytosol 41.64 22.04
Os03t0690600-03 Rice cytosol 50.47 21.89
Bra031581.1-P Field mustard cytosol 46.06 21.86
Bra028390.1-P Field mustard cytosol 48.27 21.67
Zm00001d028603_P001 Maize cytosol 50.16 21.66
Bra017915.1-P Field mustard cytoskeleton, cytosol, nucleus, plastid 27.76 21.57
Bra030688.1-P Field mustard nucleus 49.84 21.27
GSMUA_Achr10P... Banana nucleus 29.34 21.04
GSMUA_Achr6P34090_001 Banana nucleus 40.06 20.75
OQU91407 Sorghum nucleus 44.48 20.55
Bra035653.1-P Field mustard cytosol 46.69 20.5
TraesCS3D01G067900.1 Wheat nucleus 44.48 20.43
Bra020715.1-P Field mustard cytosol, plastid 31.23 19.92
TraesCS5D01G152700.1 Wheat cytosol, plastid 48.27 19.77
GSMUA_Achr7P15080_001 Banana cytosol 37.22 19.73
TraesCS5A01G139000.1 Wheat cytosol, plastid 48.27 19.72
TraesCS5B01G138100.1 Wheat cytosol, plastid 47.95 19.59
HORVU5Hr1G045020.29 Barley cytosol 48.27 19.44
TraesCS3B01G081100.1 Wheat nucleus 43.85 19.44
TraesCS3B01G080900.1 Wheat nucleus 44.16 19.42
TraesCS3A01G068000.1 Wheat nucleus 43.85 19.41
Zm00001d047813_P002 Maize nucleus 50.47 19.3
Bra036185.1-P Field mustard cytosol 29.97 19.19
TraesCS1B01G037300.1 Wheat cytosol 42.59 19.18
TraesCS3D01G067700.1 Wheat cytosol 43.53 19.11
EES18882 Sorghum cytosol 44.16 19.1
TraesCS3B01G081000.1 Wheat cytosol 43.53 18.96
Zm00001d035670_P001 Maize cytosol 43.22 18.87
TraesCS3A01G067900.1 Wheat cytosol 42.59 18.7
TraesCS1A01G030300.1 Wheat cytosol 41.64 18.7
TraesCS1D01G031200.1 Wheat cytosol 42.9 18.66
TraesCS1D01G030900.1 Wheat cytosol 41.96 18.65
TraesCS1D01G030800.1 Wheat cytosol 41.01 18.54
Bra018860.1-P Field mustard nucleus 30.6 18.48
Zm00001d033166_P001 Maize nucleus 42.59 18.44
Bra021063.1-P Field mustard plastid 30.6 18.3
Bra028312.1-P Field mustard cytosol 26.18 18.28
TraesCS1B01G037400.1 Wheat cytosol 41.64 18.26
HORVU1Hr1G004440.1 Barley cytosol 41.32 18.22
TraesCS3D01G067800.1 Wheat nucleus 38.8 18.2
KXG38064 Sorghum nucleus 41.01 18.06
OQU91406 Sorghum nucleus 42.59 18.05
Bra026237.1-P Field mustard plastid 30.28 17.94
TraesCS1D01G031000.1 Wheat cytosol 41.01 17.93
GSMUA_Achr8P02550_001 Banana nucleus 22.08 17.86
EES18880 Sorghum cytosol 41.64 17.81
EER91260 Sorghum nucleus 40.38 17.75
TraesCS1A01G030200.1 Wheat cytosol 40.06 17.61
GSMUA_AchrUn_... Banana cytosol 35.65 17.15
Bra012280.1-P Field mustard cytosol 28.39 16.39
TraesCS1B01G037200.1 Wheat nucleus 38.49 16.12
Bra022596.1-P Field mustard plastid 25.87 14.16
Protein Annotations
EnsemblPlants:Bra002564.1EnsemblPlants:Bra002564.1-PEnsemblPlantsGene:Bra002564GO:GO:0006139GO:GO:0006351GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009719GO:GO:0009987GO:GO:0010200
InterPro:IPR005202InterPro:TF_GRASPANTHER:PTHR31636PANTHER:PTHR31636:SF56PFAM:PF03514PFscan:PS50985
UniParc:UPI0002543B20UniProt:M4CED3MapMan:15.5.12:::
Description
AT5G59450 (E=1e-168) | scarecrow-like transcription factor 11 (SCL11)
Coordinates
chrA10:+:8855852..8856805
Molecular Weight (calculated)
36881.7 Da
IEP (calculated)
8.663
GRAVY (calculated)
-0.181
Length
317 amino acids
Sequence
(BLAST)
001: MVDILKAYKL FVHVCPIYVA DYFAANKSIY ELALSSTKLH IIDFGVLYGF QWPCLLLALS KRPGGPPKLR VTGIELPQSG FRPSDRVEET GRRLKRFCDM
101: FNVPFEFNFI AKKWESITLD EITITPGETT VVNCIHRLQY TPDETVSLDS PRDTVLKLFR DINPDLFVFA EINGTYNSPF FMTRFKEALF HFSSLFDMFD
201: TTIQAEDEYK NRALLERELL VRDAMSVISS EGAERFARPE TYKQWRVRIL RAGFRPAMIS KEILKGAKEI VRKRYHKDFL IDGDGNWMLQ GWKGRVIYAF
301: SCWKPAEKLT RDDHIII
Best Arabidopsis Sequence Match ( AT5G59450.1 )
(BLAST)
001: MDALLQVSVD GFRFENGSGS CCKPRNNLES GNNLFPDFHE SQNQSSPNDS PPTVCLDNSP VLKYINDMLM DEEDFVGISR DDLALQAAER SFYEIIQQQS
101: PESDQNTSSS SDQNSGDQDF CFPSTTTDSS ALVSSGESQR KYRHRNDEED DLENNRRNKQ PAIFVSEMEE LAVKLEHVLL VCKTNQEEEE ERTVITKQST
201: PNRAGRAKGS SNKSKTHKTN TVDLRSLLTQ CAQAVASFDQ RRATDKLKEI RAHSSSNGDG TQRLAFYFAE ALEARITGNI SPPVSNPFPS STTSMVDILK
301: AYKLFVHTCP IYVTDYFAAN KSIYELAMKA TKLHIVDFGV LYGFQWPCLL RALSKRPGGP PMLRVTGIEL PQAGFRPSDR VEETGRRLKR FCDQFNVPFE
401: FNFIAKKWET ITLDELMINP GETTVVNCIH RLQYTPDETV SLDSPRDTVL KLFRDINPDL FVFAEINGMY NSPFFMTRFR EALFHYSSLF DMFDTTIHAE
501: DEYKNRSLLE RELLVRDAMS VISCEGAERF ARPETYKQWR VRILRAGFKP ATISKQIMKE AKEIVRKRYH RDFVIDSDNN WMLQGWKGRV IYAFSCWKPA
601: EKFTNNNLNI
Arabidopsis Description
SCL11Scarecrow-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTI5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.