Factsheet for GSMUA_Achr10P22610_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P02550_001	Banana	nucleus	56.56	63.78
GSMUA_Achr7P15080_001	Banana	cytosol	85.29	63.04
CDX68389	Canola	cytosol	10.63	55.29
GSMUA_Achr5P08320_001	Banana	cytosol	54.3	53.45
GSMUA_Achr10P...	Banana	cytosol	66.74	49.25
Os03t0690600-03	Rice	cytosol	69.0	41.72
GSMUA_Achr6P34090_001	Banana	nucleus	57.47	41.5
Zm00001d028603_P001	Maize	cytosol	68.33	41.14
OQU92829	Sorghum	cytosol	68.1	41.01
PGSC0003DMT400049420	Potato	cytosol	58.6	39.01
TraesCS5D01G152700.1	Wheat	cytosol, plastid	66.97	38.24
TraesCS5A01G139000.1	Wheat	cytosol, plastid	66.97	38.14
TraesCS5B01G138100.1	Wheat	cytosol, plastid	66.97	38.14
HORVU5Hr1G045020.29	Barley	cytosol	67.87	38.12
VIT_06s0004g04990.t01	Wine grape	cytosol	37.33	37.33
GSMUA_AchrUn_...	Banana	cytosol	55.66	37.33
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	59.28	36.95
KRH24780	Soybean	cytosol	53.85	36.06
Zm00001d047813_P002	Maize	nucleus	67.42	35.95
Solyc04g011630.1.1	Tomato	cytosol	13.8	35.88
PGSC0003DMT400016258	Potato	cytosol	57.01	34.62
KRH29773	Soybean	cytosol	47.96	34.53
VIT_13s0019g01780.t01	Wine grape	nucleus	46.83	34.5
KRH65839	Soybean	cytosol, plastid	55.66	33.7
Solyc10g086530.1.1	Tomato	cytosol	57.92	33.64
Bra015584.1-P	Field mustard	cytosol	33.03	33.49
PGSC0003DMT400005480	Potato	cytosol	36.88	33.47
Solyc09g010920.1.1	Tomato	cytosol	57.47	33.38
PGSC0003DMT400022997	Potato	cytosol, plastid	57.01	33.11
CDY71578	Canola	nucleus, plastid	38.69	32.82
Solyc05g053090.1.1	Tomato	cytosol	54.98	32.71
PGSC0003DMT400069949	Potato	cytosol	54.52	32.26
KRH29775	Soybean	nucleus	49.09	32.24
CDX79750	Canola	peroxisome	49.09	32.2
VIT_13s0019g01700.t01	Wine grape	cytosol	55.2	32.11
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	48.87	32.1
CDY07777	Canola	cytosol, nucleus, peroxisome	48.87	32.1
Solyc06g076280.1.1	Tomato	cytosol	54.3	32.09
KRH10240	Soybean	cytosol	43.89	32.01
VIT_13s0019g01810.t01	Wine grape	cytosol	54.07	31.95
KRH49113	Soybean	cytosol	52.94	31.88
KRH29774	Soybean	cytosol	45.48	31.85
PGSC0003DMT400077972	Potato	cytosol	54.07	31.78
KRG99969	Soybean	cytosol	52.94	31.75
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	45.25	31.75
VIT_13s0019g01790.t01	Wine grape	cytosol	51.58	31.71
VIT_06s0004g04950.t01	Wine grape	cytosol	54.07	31.7
VIT_13s0019g01710.t01	Wine grape	cytosol	52.04	31.64
CDX86475	Canola	nucleus	50.68	31.55
CDY39530	Canola	cytosol	43.44	31.02
KRH29779	Soybean	cytosol	52.04	31.0
CDY47877	Canola	nucleus	43.21	30.91
VIT_06s0004g04980.t01	Wine grape	nucleus	49.09	30.82
CDY47878	Canola	nucleus	47.96	30.68
Bra028391.1-P	Field mustard	nucleus	42.99	30.65
AT2G37650.1	Thale cress	cytosol	49.77	30.64
KRH24775	Soybean	cytosol	47.06	30.59
KRH24773	Soybean	nucleus	47.51	30.57
VIT_06s0004g04970.t01	Wine grape	cytosol	45.48	30.55
KRH24778	Soybean	nucleus	46.61	30.47
Bra028390.1-P	Field mustard	cytosol	48.64	30.45
KRH29771	Soybean	cytosol	46.83	30.44
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	51.13	30.42
Bra030688.1-P	Field mustard	nucleus	50.45	30.01
KRH10243	Soybean	nucleus	44.57	29.62
KRH23095	Soybean	cytosol	43.89	29.53
CDY15616	Canola	nucleus	47.74	29.51
KRH10241	Soybean	cytosol, nucleus, peroxisome	45.7	29.36
KRH23089	Soybean	cytosol	42.76	29.35
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	21.04	29.34
CDX80265	Canola	endoplasmic reticulum, golgi	21.04	29.34
AT2G29060.1	Thale cress	cytosol	45.7	29.11
AT1G07530.1	Thale cress	cytosol	50.23	28.87
Bra035653.1-P	Field mustard	cytosol	47.06	28.81
CDY31749	Canola	cytosol	47.06	28.65
VIT_06s0004g04960.t01	Wine grape	nucleus	51.58	28.61
KRH23090	Soybean	vacuole	40.05	28.5
AT3G46600.1	Thale cress	cytosol	37.56	28.47
CDY06266	Canola	cytosol	40.05	28.01
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	40.72	27.86
KRH23094	Soybean	cytosol	34.84	27.85
Bra033813.1-P	Field mustard	nucleus	36.43	27.66
Bra031581.1-P	Field mustard	cytosol	41.4	27.4
Solyc06g082530.1.1	Tomato	cytosol	40.27	27.26
CDX77228	Canola	cytosol	41.4	27.23
AT1G07520.3	Thale cress	cytosol	42.53	27.01
PGSC0003DMT400078286	Potato	nucleus	40.72	26.99
CDX82987	Canola	nucleus	36.65	26.96
AT5G59450.1	Thale cress	nucleus	36.88	26.72
Solyc01g100200.2.1	Tomato	nucleus	39.82	26.43
CDY06265	Canola	cytosol	40.72	26.09
CDY33040	Canola	nucleus	35.07	25.96
CDY09912	Canola	cytosol	40.95	25.86
Bra031580.1-P	Field mustard	cytosol	40.27	25.8
CDY09911	Canola	nucleus	33.03	25.0
CDX68388	Canola	cytosol	22.85	24.4
GSMUA_Achr4P07010_001	Banana	cytosol	16.29	21.95
GSMUA_Achr4P11050_001	Banana	nucleus	17.65	19.65
GSMUA_Achr6P11780_001	Banana	cytosol	14.93	19.3
GSMUA_AchrUn_...	Banana	nucleus	17.87	18.46
GSMUA_Achr8P03610_001	Banana	cytosol	5.66	17.36
GSMUA_Achr10P...	Banana	cytosol	20.36	16.3
GSMUA_Achr6P24310_001	Banana	cytosol	19.0	15.7
GSMUA_Achr3P02410_001	Banana	nucleus	20.36	15.33
GSMUA_Achr4P26400_001	Banana	cytosol, mitochondrion, plastid	17.42	13.18
GSMUA_Achr1P03650_001	Banana	mitochondrion	16.74	12.98
GSMUA_AchrUn_...	Banana	plastid	16.97	12.82
GSMUA_Achr9P12070_001	Banana	mitochondrion, plastid	14.93	12.69
GSMUA_Achr9P18770_001	Banana	cytosol	15.84	12.3
GSMUA_Achr4P24960_001	Banana	cytosol	13.12	11.96
GSMUA_Achr5P12810_001	Banana	cytosol, plastid	15.16	11.92
GSMUA_Achr9P24710_001	Banana	endoplasmic reticulum, plastid	14.03	10.63

Protein Annotations

EnsemblPlants:GSMUA_Achr10P22610_001	EnsemblPlants:GSMUA_Achr10T22610_001	EnsemblPlantsGene:GSMUA_Achr10G22610_001	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS
PANTHER:PTHR31636	PANTHER:PTHR31636:SF44	PFAM:PF03514	PFscan:PS50985	SEG:seg	UniParc:UPI000294D274
UniProt:M0RKI6	MapMan:15.5.12	:	:	:	:

Description

Putative Scarecrow-like protein 14 [Source:GMGC_GENE;Acc:GSMUA_Achr10G22610_001]

Coordinates

chr10:-:27738580..27740577

Molecular Weight (calculated)

49853.6 Da

IEP (calculated)

8.131

GRAVY (calculated)

-0.631

Length

442 amino acids

Sequence
(BLAST)

001: MEEDIDEKIS TYKEESALRA AEKPFYDILG QKYPPSPDRP PPINIYQSSE SPYERSSNHD SSDNQHSRAH AGSVDYSPQT PSSSSNSVSS SIEEPFNNVS
101: ISPNLFFGSV PAWHFKRGVE EARKFLPIND KLVINLESND DLDLAEGRSN KQSAVSSQEE VRSEMFDMVL LCSSGGKARG KKQTKKEVVD LRTLLILCAQ
201: AVAADDRRTA NELLKQIRQH SSPHGDGSQR LAHCFADGLE ARLAGTGSQI YHALVAKRTT ATDVLKAYHL YLAACPFKRI SHFFSNQTIL NLADKASKPG
301: FRPTERIEET GRRLADYAKS FNVPFEYQAI ASKWETIRVE DLHIAKDEVV VVNCLYRFRN LIDETGPERV ERPETYKQWQ VRNLRAGFVQ LRPNPDIMKK
401: AKDKVKGCYH KDFVIDEDGG WLIQGWKGRI VYAISAWKPK GA

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.