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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d028603_P001 Maize cytosol 94.14 94.14
Os03t0690600-03 Rice cytosol 84.06 84.4
Zm00001d047813_P002 Maize nucleus 92.23 81.66
TraesCS5D01G152700.1 Wheat cytosol, plastid 80.38 76.23
TraesCS5A01G139000.1 Wheat cytosol, plastid 80.38 76.03
TraesCS5B01G138100.1 Wheat cytosol, plastid 80.25 75.9
HORVU5Hr1G045020.29 Barley cytosol 80.65 75.22
Solyc04g011630.1.1 Tomato cytosol 15.94 68.82
GSMUA_Achr10P... Banana nucleus 41.01 68.1
GSMUA_Achr10P... Banana cytosol 53.0 64.94
GSMUA_Achr7P15080_001 Banana cytosol 52.32 64.21
CDX68389 Canola cytosol 6.95 60.0
VIT_06s0004g04990.t01 Wine grape cytosol 32.02 53.17
PGSC0003DMT400049420 Potato cytosol 47.55 52.56
VIT_08s0007g00510.t01 Wine grape cytosol, plastid 50.0 51.76
Bra002564.1-P Field mustard endoplasmic reticulum, golgi 22.21 51.42
CDX80265 Canola endoplasmic reticulum, golgi 21.93 50.79
KXG38103 Sorghum cytosol 42.1 49.36
VIT_13s0019g01810.t01 Wine grape cytosol 50.27 49.33
PGSC0003DMT400016258 Potato cytosol 48.23 48.63
KRH65839 Soybean cytosol, plastid 48.09 48.36
KRH49113 Soybean cytosol 48.09 48.09
PGSC0003DMT400005480 Potato cytosol 31.88 48.05
VIT_13s0019g01780.t01 Wine grape nucleus 39.24 48.0
KRH10240 Soybean cytosol 39.37 47.69
KXG21080 Sorghum cytosol 40.6 47.6
KXG21079 Sorghum cytosol 40.33 47.51
KRG99969 Soybean cytosol 47.41 47.22
VIT_13s0019g01710.t01 Wine grape cytosol 46.73 47.18
PGSC0003DMT400022997 Potato cytosol, plastid 48.91 47.17
Solyc09g010920.1.1 Tomato cytosol 48.91 47.17
KRH24780 Soybean cytosol 42.23 46.97
Solyc10g086530.1.1 Tomato cytosol 48.64 46.91
VIT_13s0019g01700.t01 Wine grape cytosol 47.68 46.05
CDY71578 Canola nucleus, plastid 32.56 45.87
KRH29773 Soybean cytosol 38.28 45.77
KXG37250 Sorghum cytosol 40.46 45.62
PGSC0003DMT400069949 Potato cytosol 46.19 45.38
VIT_13s0019g01790.t01 Wine grape cytosol 44.41 45.34
Bra000012.1-P Field mustard cytosol, nucleus, peroxisome 41.28 45.02
CDY07777 Canola cytosol, nucleus, peroxisome 41.28 45.02
CDX79750 Canola peroxisome 41.28 44.96
Solyc05g053090.1.1 Tomato cytosol 45.5 44.95
KRH23094 Soybean cytosol 33.79 44.85
KRH29771 Soybean cytosol 41.28 44.56
KRH24773 Soybean nucleus 41.28 44.1
KRH23095 Soybean cytosol 39.37 43.99
VIT_06s0004g04970.t01 Wine grape cytosol 39.24 43.77
PGSC0003DMT400077972 Potato cytosol 44.82 43.75
CDY47877 Canola nucleus 36.78 43.69
VIT_06s0004g04980.t01 Wine grape nucleus 41.83 43.61
AT2G37650.1 Thale cress cytosol 42.51 43.45
KRH29775 Soybean nucleus 39.78 43.39
Bra028391.1-P Field mustard nucleus 36.65 43.39
VIT_06s0004g04950.t01 Wine grape cytosol 44.55 43.37
AT2G29065.1 Thale cress cytosol, nucleus, plastid 37.19 43.33
Solyc06g076280.1.1 Tomato cytosol 44.14 43.32
KRH24778 Soybean nucleus 39.78 43.2
CDY39530 Canola cytosol 36.38 43.13
KRH29779 Soybean cytosol 43.46 42.99
KRH29774 Soybean cytosol 36.78 42.79
EES01740 Sorghum cytosol 47.0 42.75
AT3G46600.1 Thale cress cytosol 33.79 42.54
KRH24775 Soybean cytosol 39.37 42.5
Bra015584.1-P Field mustard cytosol 25.2 42.43
CDY47878 Canola nucleus 39.92 42.4
CDX86475 Canola nucleus 40.87 42.25
Bra028390.1-P Field mustard cytosol 40.33 41.93
PGSC0003DMT400063769 Potato cytosol, nucleus, peroxisome 36.78 41.8
OQU91407 Sorghum nucleus 38.96 41.69
AT2G29060.1 Thale cress cytosol 39.37 41.64
EES16206 Sorghum cytosol 41.01 41.23
KXG29219 Sorghum cytosol 38.69 41.22
CDX77228 Canola cytosol 37.6 41.07
OQU84105 Sorghum cytosol 40.6 40.82
OQU84113 Sorghum cytosol, nucleus, plastid 35.42 40.69
KRH23089 Soybean cytosol 35.69 40.68
OQU84115 Sorghum cytosol 26.98 40.66
Bra035653.1-P Field mustard cytosol 39.92 40.58
Bra030688.1-P Field mustard nucleus 41.01 40.51
KRH10243 Soybean nucleus 36.65 40.45
CDY15616 Canola nucleus 39.37 40.42
Solyc01g100200.2.1 Tomato nucleus 36.65 40.39
CDY31749 Canola cytosol 39.92 40.36
Bra033813.1-P Field mustard nucleus 31.88 40.21
AT5G59450.1 Thale cress nucleus 33.24 40.0
KRH23091 Soybean endoplasmic reticulum, plasma membrane 40.46 39.97
Solyc06g082530.1.1 Tomato cytosol 35.56 39.97
KRH10241 Soybean cytosol, nucleus, peroxisome 37.33 39.83
AT1G07530.1 Thale cress cytosol 41.69 39.79
OQU84111 Sorghum cytosol 36.51 39.76
CDY33040 Canola nucleus 32.29 39.7
CDX82987 Canola nucleus 32.43 39.6
VIT_06s0004g04960.t01 Wine grape nucleus 42.92 39.52
PGSC0003DMT400078286 Potato nucleus 35.83 39.43
EES18882 Sorghum cytosol 39.24 39.29
OQU84120 Sorghum nucleus 33.79 39.12
EES09053 Sorghum cytosol 34.06 39.06
KXG29228 Sorghum cytosol 32.83 38.93
CDY06266 Canola cytosol 33.52 38.92
EES18880 Sorghum cytosol 38.96 38.6
OQU91406 Sorghum nucleus 38.96 38.24
KXG38064 Sorghum nucleus 37.47 38.19
KRH23090 Soybean vacuole 32.29 38.16
AT1G07520.3 Thale cress cytosol 36.1 38.07
KXG26392 Sorghum cytosol 32.83 38.01
EER91260 Sorghum nucleus 37.06 37.73
OQU84112 Sorghum cytosol 36.78 37.66
OQU84116 Sorghum nucleus 31.74 37.64
OQU83981 Sorghum cytosol 25.48 37.63
KXG29232 Sorghum cytosol 34.74 37.5
OQU90003 Sorghum cytosol 39.24 37.31
Bra031581.1-P Field mustard cytosol 33.92 37.28
CDY06265 Canola cytosol 34.74 36.96
Bra031580.1-P Field mustard cytosol 34.6 36.81
OQU84114 Sorghum mitochondrion 23.84 36.53
CDY09912 Canola cytosol 34.47 36.14
KXG29223 Sorghum cytosol 34.74 35.87
KXG36217 Sorghum cytosol 40.19 35.54
OQU83979 Sorghum plastid 29.16 35.26
OQU83980 Sorghum cytosol 29.56 34.94
OQU84119 Sorghum cytosol, extracellular, mitochondrion, plastid 29.97 34.65
KXG29224 Sorghum nucleus 32.43 34.34
CDX68388 Canola cytosol 19.35 34.3
OQU84106 Sorghum cytosol, endoplasmic reticulum, plastid 37.19 33.91
CDY09911 Canola nucleus 26.7 33.56
OQU83978 Sorghum mitochondrion 28.47 33.02
OQU81651 Sorghum cytosol 31.34 32.86
EER97449 Sorghum cytosol 20.03 26.87
EER95348 Sorghum cytosol 18.39 25.19
KXG33821 Sorghum cytosol 17.57 22.67
EES18257 Sorghum cytosol 17.03 22.2
EER97346 Sorghum cytosol 17.03 21.93
EES05727 Sorghum cytosol 15.67 18.28
EES12703 Sorghum cytosol, nucleus, plastid 14.44 16.26
Protein Annotations
MapMan:15.5.12UniProt:A0A1Z5SAG3ncoils:CoilGO:GO:0006139GO:GO:0006351GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR005202ProteinID:OQU92828.1
EnsemblPlants:OQU92829ProteinID:OQU92829ProteinID:OQU92829.1ProteinID:OQU92830.1PFAM:PF03514PFscan:PS50985
PANTHER:PTHR31636PANTHER:PTHR31636:SF44EnsemblPlantsGene:SORBI_3001G421900InterPro:TF_GRASUniParc:UPI000B4265F6SEG:seg
Description
hypothetical protein
Coordinates
chr1:+:70269442..70274698
Molecular Weight (calculated)
82677.8 Da
IEP (calculated)
6.466
GRAVY (calculated)
-0.487
Length
734 amino acids
Sequence
(BLAST)
001: MGLDNTYGEL SGMFCGGLSY DGYIDHSSGS DYFRFTDPLP VVVPQMTAEA CSNPSSTVSR ANTETDNPED WEFISDESLN YISRMLMEED IDEKVSMYQA
101: ESAALRAAAK PFYDILGHKF PPSPDHQPIP WSMDSPSESS SSICTQSIAS SVTSSSIGGT VDSNWRYDVG RSEQLEAYQG LCGQSSQPLV GTSSDASNAV
201: DGLDDPLITN GQIPEYLFES LPTWDFRRGI EEAQKFLPVS NTLVIDLEAG GITRPQEARK DVSLNAKKAD VLKAKKNRQS EDLDLIEGRN FKQSAFSSDE
301: PDWIEMFDDL LRQTEKKATD LRELMRNEAS KNSQVTQTKG PSGPRPRGRK PTKKDVVDLR TILIHCAQAV AADDRRTANE LLKQIRHHSK PNGDGSQRLA
401: HCFADGLEAR LAGTGSQLYR KLIAKRTTAS DMLKAYHLYL AACPFKRLSH FLSNQTILSM IKNASKVHII DFGIYFGFQW PCLIRRLSKR EGGPPVLRVT
501: GIDVPQPGFR PSERIEETGQ RLAEYAAKFK VPFEYQGIAS KWETIRVEDL KVGKDEVVIV NCLYRFRNLI DETVAVDSPR NRVLNTIRQV NPAIFIHGIV
601: NGSYSVPFFI TRFREALFHF SALFDMLETT VPRDDPQRAL IEREMFGREA LNVIACEGSD RVERPETYKQ WQVRNLRAGF VQSPLNKEIV MKAKDKVKDI
701: YHKDFVIDED SGWLLQGWKG RIIYAISTWK PKNN
Best Arabidopsis Sequence Match ( AT2G37650.1 )
(BLAST)
001: MITEPSLTGI SGMVNRNRLS GLPDQPSSHS FTPVTLYDGF NYNLSSDHIN TVVAAPENSV FIREEEEEED PADDFDFSDA VLGYISQMLN EEDMDDKVCM
101: LQESLDLEAA ERSLYEAIGK KYPPSPERNL AFAERNSENL DRVVPGNYTG GDCIGFGNGG IKPLSSGFTL DFRNPQSCSS ILSVPQSNGL ITIYGDGIDE
201: SSKNNRENHQ SVWLFRREIE EANRFNPEEN ELIVNFREEN CVSKARKNSS RDEICVEEER SSKLPAVFGE DILRSDVVDK ILVHVPGGES MKEFNALRDV
301: LKKGVEKKKA SDAQGGKRRA RGRGRGRGRG GGGGQNGKKE VVDLRSLLIH CAQAVAADDR RCAGQLLKQI RLHSTPFGDG NQRLAHCFAN GLEARLAGTG
401: SQIYKGIVSK PRSAAAVLKA HQLFLACCPF RKLSYFITNK TIRDLVGNSQ RVHVIDFGIL YGFQWPTLIH RFSMYGSPKV RITGIEFPQP GFRPAQRVEE
501: TGQRLAAYAK LFGVPFEYKA IAKKWDAIQL EDLDIDRDEI TVVNCLYRAE NLHDESVKVE SCRDTVLNLI GKINPDLFVF GIVNGAYNAP FFVTRFREAL
601: FHFSSIFDML ETIVPREDEE RMFLEMEVFG REALNVIACE GWERVERPET YKQWHVRAMR SGLVQVPFDP SIMKTSLHKV HTFYHKDFVI DQDNRWLLQG
701: WKGRTVMALS VWKPESKA
Arabidopsis Description
SCL9Scarecrow-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80933]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.