CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU83979	Sorghum	plastid	76.65	78.42
Zm00001d048681_P001	Maize	cytosol	67.79	73.99
OQU83981	Sorghum	cytosol	58.45	73.04
OQU83978	Sorghum	mitochondrion	59.74	58.61
OQU84115	Sorghum	cytosol	44.44	56.67
KXG29228	Sorghum	cytosol	54.91	55.09
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	54.43	53.23
Os11t0706200-00	Rice	nucleus	45.89	48.06
OQU84113	Sorghum	cytosol, nucleus, plastid	43.0	41.78
OQU81651	Sorghum	cytosol	46.86	41.57
OQU84116	Sorghum	nucleus	40.74	40.87
OQU84114	Sorghum	mitochondrion	30.76	39.87
OQU84111	Sorghum	cytosol	43.16	39.76
KXG29219	Sorghum	cytosol	43.96	39.62
OQU84105	Sorghum	cytosol	45.09	38.36
OQU84120	Sorghum	nucleus	38.81	38.01
KXG29232	Sorghum	cytosol	40.1	36.62
EES09053	Sorghum	cytosol	37.68	36.56
OQU84112	Sorghum	cytosol	42.03	36.4
OQU90003	Sorghum	cytosol	44.61	35.88
KXG26392	Sorghum	cytosol	36.55	35.8
EES16206	Sorghum	cytosol	42.03	35.75
KXG29223	Sorghum	cytosol	40.74	35.58
KXG36217	Sorghum	cytosol	47.18	35.3
GSMUA_Achr5P08320_001	Banana	cytosol	25.44	35.19
KXG29224	Sorghum	nucleus	38.97	34.92
OQU84106	Sorghum	cytosol, endoplasmic reticulum, plastid	43.8	33.79
KXG21079	Sorghum	cytosol	31.4	31.3
KXG38103	Sorghum	cytosol	31.4	31.15
KXG21080	Sorghum	cytosol	30.6	30.35
OQU92829	Sorghum	cytosol	34.94	29.56
KXG37250	Sorghum	cytosol	30.92	29.49
EES01740	Sorghum	cytosol	35.43	27.26
OQU91407	Sorghum	nucleus	28.82	26.09
EES18882	Sorghum	cytosol	30.27	25.65
EER91260	Sorghum	nucleus	29.63	25.52
KXG38064	Sorghum	nucleus	29.31	25.28
OQU91406	Sorghum	nucleus	29.47	24.47
EES18880	Sorghum	cytosol	29.15	24.43
EER95348	Sorghum	cytosol	18.52	21.46
EER97346	Sorghum	cytosol	19.0	20.7
EER97449	Sorghum	cytosol	17.87	20.29
KXG33821	Sorghum	cytosol	18.52	20.21
EES18257	Sorghum	cytosol	17.23	19.01
EES05727	Sorghum	cytosol	18.04	17.81
EES12703	Sorghum	cytosol, nucleus, plastid	16.43	15.64

Protein Annotations

EnsemblPlants:OQU83980	EnsemblPlantsGene:SORBI_3005G209200	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS	ncoils:Coil
PANTHER:PTHR31636	PANTHER:PTHR31636:SF41	PFAM:PF03514	PFscan:PS50985	ProteinID:OQU83980	ProteinID:OQU83980.1
UniParc:UPI000B423DFC	UniProt:A0A1Z5RJM9	MapMan:15.5.12	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:69594927..69596932

Molecular Weight (calculated)

70834.4 Da

IEP (calculated)

6.289

GRAVY (calculated)

-0.328

Length

621 amino acids

Sequence
(BLAST)

001: MATTPEEFFI MDLMEQPPAS PPVFIDLPQK PNVSNEVRHR VPNDDMMLPY ISHMLMEDDI DDELNNHPAL LQVQQPFAQI LSSHSLGTNT NNSEGANEFL
101: HEGNGDEGAL NSPLSKGTCV LGAYLKGMEE ANMLLHKDND IRRDELVINQ IRESNITDSW VRKRYNRDHL IEEEVRSANK AVTRSKGPEE KHSNEMLDEM
201: MLHSYETCIK GMEHVTMDNS EVEKRNMKSG RIKVARVVDI RRLLISCAQA LAADDDKTTR ELLKQIQQHA SATGDATQRL AHCFAMGLEA RIVGSGSQLL
301: QRLMLEYPSA IEFLKAYKLF SEVCCFINVT FIFSAMTIMQ AMAGKSRLHI VDYGTRFGFQ WAGLLRLLAS KKGGLPEVKI TAIARPKPMC HPGEQIEKIG
401: CRLRKCAHEL GLPSFKFHTI MKNWEDTFII DMHTDSDEVL VVSDMFSFGI LMEESLFFDD PSPRDTVLHN IKKMRPDVFI QNVINRSYGA SFLSRFRDTV
501: FYYMALFDML DATIPRDSKS RLLLEKVLLG CHAFNSISCE GMDLVEIPEK YKQWQTRNQR AGLRQLPLKS SILNVVKDEV MKHYHKDFMI SQDGQWLLQG
601: WMGRVICAHT TWVANEDTSS E

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.