Factsheet for Zm00001d048681_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU83979	Sorghum	plastid	74.87	70.18
OQU83980	Sorghum	cytosol	73.99	67.79
Zm00001d007713_P001	Maize	cytosol	65.91	62.6
Zm00001d048682_P001	Maize	nucleus	61.86	55.96
Zm00001d007248_P001	Maize	cytosol, endoplasmic reticulum, nucleus	47.63	50.09
Os11t0706200-00	Rice	nucleus	46.92	45.03
Zm00001d030744_P001	Maize	cytosol	35.85	41.46
Zm00001d048601_P001	Maize	cytosol	43.41	38.47
Zm00001d048588_P001	Maize	cytosol	40.6	36.44
Zm00001d048600_P001	Maize	nucleus	40.42	35.66
Zm00001d048604_P001	Maize	cytosol	47.63	35.42
Zm00001d003553_P001	Maize	cytosol	37.43	35.09
Zm00001d048602_P001	Maize	cytosol	40.25	34.38
Zm00001d041536_P001	Maize	cytosol	42.53	34.08
GSMUA_Achr5P08320_001	Banana	cytosol	26.36	33.41
Zm00001d034664_P001	Maize	plastid	30.76	31.31
Zm00001d011070_P001	Maize	cytosol	32.69	29.67
Zm00001d035671_P001	Maize	cytosol	31.63	28.75
Zm00001d028603_P001	Maize	cytosol	35.68	27.66
Zm00001d042907_P001	Maize	cytosol	36.56	25.71
Zm00001d035670_P001	Maize	cytosol	31.63	24.79
Zm00001d033166_P001	Maize	nucleus	31.81	24.73
Zm00001d047813_P002	Maize	nucleus	35.15	24.13
Zm00001d048199_P001	Maize	mitochondrion, nucleus	21.97	23.32
Zm00001d030500_P001	Maize	nucleus	21.09	22.14
Zm00001d021946_P001	Maize	cytosol	20.21	20.61
Zm00001d006701_P001	Maize	cytosol	19.68	20.22
Zm00001d038225_P001	Maize	cytosol	19.68	19.96
Zm00001d051461_P001	Maize	cytosol	21.27	19.93
Zm00001d006551_P001	Maize	golgi, mitochondrion	20.04	18.48
Zm00001d048603_P001	Maize	cytosol	45.52	18.2
Zm00001d026050_P001	Maize	mitochondrion, nucleus, plastid	19.51	17.82
Zm00001d002573_P001	Maize	cytosol	18.98	17.34

Protein Annotations

MapMan:15.5.12	ProteinID:AQK48406.1	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	UniProt:K7TYB9	PFAM:PF03514
PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF41	InterPro:TF_GRAS	UniParc:UPI00022138B6	EnsemblPlantsGene:Zm00001d048681
EnsemblPlants:Zm00001d048681_P001	EnsemblPlants:Zm00001d048681_T001	SEG:seg	:	:	:

Description

GRAS-transcription factor 84

Coordinates

chr4:-:3223779..3225488

Molecular Weight (calculated)

64165.2 Da

IEP (calculated)

5.607

GRAVY (calculated)

-0.209

Length

569 amino acids

Sequence
(BLAST)

001: MSMATTPEEF FIKDLMEQPP LSPPVFLDLP HKPNASNEDR HHVPNNDMTL PYISRMLMED DDDELGDHPA LLQVQQPFAE ILSSPPLVGN NTNNSEGPND
101: FLHEGTYELL DQTEESNIIN SRVNRAVMMT TNELEDRCAN EMVDKMILHA YETCIGGMER VTIDVEKRNR KRKAAAAARG GVVDIRRVLT SCAQALAADD
201: HATARELLKR IKQHASATGD TTQRLAHCFA KGLEARILGT GGRIWPLLVL EYPSGVELLK AYSLYSEACC FITVTFIFSA MIIMQAMAGK SRLHIVDYGT
301: RFGFQWAGLL RLLASKEGDL PEVEITAIAR PTPICYPGEQ IEKVGSRLMQ CAHELGLPSF KFHAVTKNWE DATCTMEDHL HRDADEVLVV IDLFSFSILM
401: EESMFFDAPS PRDTVLCNIR KMRPDVFIQS VVNRSYGSSF LSRFREILFY CTAMFDMLDA TLPRESESRL VFEKLVLGCY AFNGISCEGS DLVLRPEKYR
501: QWQARNERAG LRQLPLKPSI VKVVKDEVMK HYHKDFLVCQ DGQWLLQGWM GRVLTAHTTW VANGDASSG

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.