Factsheet for Zm00001d038225_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18257	Sorghum	cytosol	90.55	90.23
Os01t0881500-01	Rice	cytosol	71.66	72.69
TraesCS3A01G408000.1	Wheat	cytosol	69.88	71.01
TraesCS3D01G403100.1	Wheat	cytosol	69.52	70.65
TraesCS3B01G441600.1	Wheat	cytosol	69.34	70.47
HORVU3Hr1G091250.1	Barley	cytosol	69.34	70.47
GSMUA_Achr6P11780_001	Banana	cytosol	42.07	69.01
Bra017915.1-P	Field mustard	cytoskeleton, cytosol, nucleus, plastid	42.6	58.58
GSMUA_Achr10P...	Banana	cytosol	55.44	56.34
VIT_04s0044g01370.t01	Wine grape	nucleus	52.76	52.11
GSMUA_Achr3P02410_001	Banana	nucleus	54.37	51.96
VIT_18s0001g15270.t01	Wine grape	cytosol, plastid	51.52	51.15
CDY61060	Canola	cytosol	47.77	49.72
KRH64568	Soybean	cytosol	52.23	49.16
CDY00377	Canola	cytosol	48.13	49.09
Bra012280.1-P	Field mustard	cytosol	47.77	48.82
KRH53364	Soybean	cytosol	51.69	48.33
KRH18097	Soybean	cytosol	50.62	48.05
Solyc04g064550.1.1	Tomato	mitochondrion	47.77	47.6
PGSC0003DMT400063944	Potato	cytosol, mitochondrion	47.42	47.59
CDY50240	Canola	cytosol	48.84	47.57
KRH15917	Soybean	cytosol	50.09	47.55
CDY68224	Canola	cytosol	48.66	47.4
AT1G21450.1	Thale cress	nucleus	49.2	46.54
Zm00001d048199_P001	Maize	mitochondrion, nucleus	35.83	37.5
Zm00001d006701_P001	Maize	cytosol	36.54	37.0
Zm00001d021946_P001	Maize	cytosol	36.36	36.56
Zm00001d030500_P001	Maize	nucleus	34.4	35.61
Zm00001d006551_P001	Maize	golgi, mitochondrion	37.08	33.71
Zm00001d051461_P001	Maize	cytosol	29.59	27.35
Zm00001d026050_P001	Maize	mitochondrion, nucleus, plastid	29.23	26.32
Zm00001d002573_P001	Maize	cytosol	28.52	25.68
Zm00001d030744_P001	Maize	cytosol	22.46	25.61
Zm00001d035671_P001	Maize	cytosol	24.24	21.73
Zm00001d034664_P001	Maize	plastid	21.57	21.65
Zm00001d048588_P001	Maize	cytosol	23.35	20.66
Zm00001d011070_P001	Maize	cytosol	22.99	20.57
Zm00001d048601_P001	Maize	cytosol	23.35	20.41
Zm00001d003553_P001	Maize	cytosol	21.39	19.77
Zm00001d048681_P001	Maize	cytosol	19.96	19.68
Zm00001d048602_P001	Maize	cytosol	22.82	19.22
Zm00001d007248_P001	Maize	cytosol, endoplasmic reticulum, nucleus	18.36	19.04
Zm00001d048600_P001	Maize	nucleus	21.57	18.76
Zm00001d007713_P001	Maize	cytosol	19.96	18.7
Zm00001d041536_P001	Maize	cytosol	23.53	18.59
Zm00001d033166_P001	Maize	nucleus	23.71	18.17
Zm00001d048682_P001	Maize	nucleus	19.96	17.81
Zm00001d028603_P001	Maize	cytosol	23.17	17.71
Zm00001d048604_P001	Maize	cytosol	22.28	16.34
Zm00001d035670_P001	Maize	cytosol	21.03	16.25
Zm00001d047813_P002	Maize	nucleus	23.71	16.04
Zm00001d042907_P001	Maize	cytosol	22.99	15.95
Zm00001d048603_P001	Maize	cytosol	23.53	9.28

Protein Annotations

EntrezGene:103630377	MapMan:15.5.12	UniProt:A0A1D6M4M4	ProteinID:AQK86080.1	ProteinID:AQK86082.1	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR005202	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF10	InterPro:Scarecrow-like_1
InterPro:TF_GRAS	UniParc:UPI00022191CA	EnsemblPlantsGene:Zm00001d038225	EnsemblPlants:Zm00001d038225_P001	EnsemblPlants:Zm00001d038225_T001	SEG:seg

Description

GRAS-transcription factor 69

Coordinates

chr6:+:151983412..151987196

Molecular Weight (calculated)

62830.0 Da

IEP (calculated)

4.675

GRAVY (calculated)

-0.340

Length

561 amino acids

Sequence
(BLAST)

001: MSFVRQADPS ASCAETTYIH KFVPPGSVFP AQRFVSGTDL LHHGPQPYNA EGYKQSGFNG TAPHAFQSFY NTDSYAESHF NEAPYSPAIF DISQQNSQSL
101: SDNQASDLVE FDEDEMRVKL QELEHALLDD GDEIFFDLSG SINDEWNDNI KTNNEWVNTM KNIVSPDSPK EASPESSICC LDNNVGEARN PKQLLFDCAE
201: AISENSIDEA QSIIAELRQK VAIQGDPSQR LAAYLVEGLA ATLQSSGKGI YRALRCKEAP TLYQLSAMQI LFEICPCFRL GFMAANYAIL EACKGEDVVH
301: IIDFDINQGS QYITLIQFLK NNSNKPRLLR ITGVDDPESV HRAVGGLNVV GQRLEKLAED CEVRFEFRAV AANIEDLTAG MLGRRPGEAL IVNFAFLLHH
401: LPDESVSIMN QRDRLLRMVK GLRPKLVTLV EQDANTNTTP FPSRFREVYD YYSALFDSLD ATLPRESPDR MNVERQCLAR EIVNILACEG PDRVERYEVA
501: GKWRARMAMA GFVPSPFNSG AVDGIRSLLK SYCDKYRFEK VQDGLHFGWG DKTLVFSSAW Q

Best Arabidopsis Sequence Match ( AT1G21450.1 )
(BLAST)

001: MVEQTVVREH IKARVMSLVR SAEPSSYRNP KLYTLNENGN NNGVSSAQIF DPDRSKNPCL TDDSYPSQSY EKYFLDSPTD EFVQHPIGSG ASVSSFGSLD
101: SFPYQSRPVL GCSMEFQLPL DSTSTSSTRL LGDYQAVSYS PSMDVVEEFD DEQMRSKIQE LERALLGDED DKMVGIDNLM EIDSEWSYQN ESEQHQDSPK
201: ESSSADSNSH VSSKEVVSQA TPKQILISCA RALSEGKLEE ALSMVNELRQ IVSIQGDPSQ RIAAYMVEGL AARMAASGKF IYRALKCKEP PSDERLAAMQ
301: VLFEVCPCFK FGFLAANGAI LEAIKGEEEV HIIDFDINQG NQYMTLIRSI AELPGKRPRL RLTGIDDPES VQRSIGGLRI IGLRLEQLAE DNGVSFKFKA
401: MPSKTSIVSP STLGCKPGET LIVNFAFQLH HMPDESVTTV NQRDELLHMV KSLNPKLVTV VEQDVNTNTS PFFPRFIEAY EYYSAVFESL DMTLPRESQE
501: RMNVERQCLA RDIVNIVACE GEERIERYEA AGKWRARMMM AGFNPKPMSA KVTNNIQNLI KQQYCNKYKL KEEMGELHFC WEEKSLIVAS AWR

Arabidopsis Description

SCL1Scarecrow-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SDQ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.