Factsheet for Zm00001d034664_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37250	Sorghum	cytosol	89.62	76.96
Solyc04g011630.1.1	Tomato	cytosol	18.96	62.35
Os04t0590400-01	Rice	cytosol, nucleus, peroxisome	66.55	58.49
CDX68389	Canola	cytosol	8.59	56.47
HORVU5Hr1G113620.1	Barley	cytosol, nucleus, peroxisome	63.51	55.12
TraesCS5D01G494900.1	Wheat	cytosol	64.04	54.49
TraesCS5B01G494500.1	Wheat	cytosol	63.86	54.34
TraesCS5A01G481300.1	Wheat	cytosol	63.51	54.2
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	29.87	52.68
CDX80265	Canola	endoplasmic reticulum, golgi	29.7	52.37
VIT_06s0004g04990.t01	Wine grape	cytosol	37.03	46.83
Zm00001d030744_P001	Maize	cytosol	39.0	44.31
PGSC0003DMT400005480	Potato	cytosol	37.75	43.33
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	50.98	40.2
PGSC0003DMT400049420	Potato	cytosol	47.05	39.61
AT3G46600.1	Thale cress	cytosol	40.97	39.28
Bra033813.1-P	Field mustard	nucleus	40.61	39.0
KRH65839	Soybean	cytosol, plastid	49.91	38.22
Zm00001d028603_P001	Maize	cytosol	50.09	38.15
VIT_06s0004g04970.t01	Wine grape	cytosol	44.9	38.15
Solyc06g082530.1.1	Tomato	cytosol	44.54	38.13
VIT_06s0004g04980.t01	Wine grape	nucleus	47.94	38.07
KRH10240	Soybean	cytosol	41.14	37.95
CDX82987	Canola	nucleus	40.25	37.44
KRH29771	Soybean	cytosol	45.44	37.35
PGSC0003DMT400078286	Potato	nucleus	44.54	37.33
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	43.11	37.31
VIT_13s0019g01810.t01	Wine grape	cytosol	49.73	37.17
PGSC0003DMT400016258	Potato	cytosol	48.3	37.09
Solyc10g086530.1.1	Tomato	cytosol	50.45	37.06
CDY33040	Canola	nucleus	39.36	36.85
KRH29773	Soybean	cytosol	40.43	36.81
KRH23095	Soybean	cytosol	43.11	36.68
KRH24773	Soybean	nucleus	45.08	36.68
VIT_13s0019g01780.t01	Wine grape	nucleus	39.36	36.67
KRH49113	Soybean	cytosol	48.12	36.65
KRG99969	Soybean	cytosol	48.12	36.5
Zm00001d011070_P001	Maize	cytosol	40.79	36.36
PGSC0003DMT400022997	Potato	cytosol, plastid	49.02	36.01
KRH29774	Soybean	cytosol	40.61	35.97
Zm00001d035671_P001	Maize	cytosol	40.25	35.94
KRH24775	Soybean	cytosol	43.65	35.88
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	43.11	35.81
CDY07777	Canola	cytosol, nucleus, peroxisome	43.11	35.81
KRH23094	Soybean	cytosol	35.42	35.8
KRH24780	Soybean	cytosol	42.22	35.76
CDX79750	Canola	peroxisome	43.11	35.76
Solyc01g100200.2.1	Tomato	nucleus	42.58	35.74
CDY71578	Canola	nucleus, plastid	33.27	35.7
Solyc09g010920.1.1	Tomato	cytosol	48.48	35.61
KRH29775	Soybean	nucleus	42.75	35.51
AT5G59450.1	Thale cress	nucleus	38.64	35.41
VIT_13s0019g01700.t01	Wine grape	cytosol	47.94	35.26
VIT_13s0019g01710.t01	Wine grape	cytosol	45.62	35.08
AT2G37650.1	Thale cress	cytosol	44.9	34.96
PGSC0003DMT400069949	Potato	cytosol	46.69	34.94
Solyc05g053090.1.1	Tomato	cytosol	46.15	34.72
CDY47877	Canola	nucleus	38.28	34.63
VIT_06s0004g04950.t01	Wine grape	cytosol	46.69	34.62
Zm00001d048601_P001	Maize	cytosol	39.71	34.58
KRH24778	Soybean	nucleus	41.68	34.47
Bra028391.1-P	Field mustard	nucleus	38.1	34.35
KRH23089	Soybean	cytosol	39.53	34.32
CDY39530	Canola	cytosol	37.92	34.25
CDX86475	Canola	nucleus	43.47	34.23
VIT_13s0019g01790.t01	Wine grape	cytosol	44.01	34.21
Bra015584.1-P	Field mustard	cytosol	26.65	34.17
AT2G29060.1	Thale cress	cytosol	41.86	33.72
KRH10243	Soybean	nucleus	40.07	33.68
Zm00001d041536_P001	Maize	cytosol	42.58	33.52
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	37.75	33.49
Solyc06g076280.1.1	Tomato	cytosol	44.72	33.42
Zm00001d047813_P002	Maize	nucleus	49.55	33.41
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	44.36	33.38
KRH29779	Soybean	cytosol	44.19	33.29
CDY06266	Canola	cytosol	37.21	32.91
CDX77228	Canola	cytosol	39.53	32.89
KRH10241	Soybean	cytosol, nucleus, peroxisome	40.25	32.7
Zm00001d042907_P001	Maize	cytosol	47.23	32.63
CDX68388	Canola	cytosol	24.15	32.61
PGSC0003DMT400077972	Potato	cytosol	43.83	32.58
CDY47878	Canola	nucleus	40.25	32.56
KRH23090	Soybean	vacuole	36.14	32.53
AT1G07530.1	Thale cress	cytosol	44.54	32.38
Zm00001d003553_P001	Maize	cytosol	35.06	32.29
Zm00001d048588_P001	Maize	cytosol	36.49	32.18
Bra030688.1-P	Field mustard	nucleus	42.58	32.03
Bra028390.1-P	Field mustard	cytosol	40.43	32.01
CDY15616	Canola	nucleus	40.43	31.61
Bra035653.1-P	Field mustard	cytosol	40.61	31.44
Bra031581.1-P	Field mustard	cytosol	37.57	31.44
CDY31749	Canola	cytosol	40.61	31.27
VIT_06s0004g04960.t01	Wine grape	nucleus	44.54	31.24
Zm00001d048602_P001	Maize	cytosol	37.03	31.08
Zm00001d048604_P001	Maize	cytosol	42.22	30.85
Zm00001d048681_P001	Maize	cytosol	31.31	30.76
Zm00001d007713_P001	Maize	cytosol	32.38	30.22
AT1G07520.3	Thale cress	cytosol	37.57	30.17
CDY06265	Canola	cytosol	37.03	30.0
Zm00001d033166_P001	Maize	nucleus	39.18	29.92
CDY09912	Canola	cytosol	37.39	29.86
Bra031580.1-P	Field mustard	cytosol	36.85	29.86
Zm00001d048600_P001	Maize	nucleus	34.35	29.77
Zm00001d035670_P001	Maize	cytosol	37.92	29.2
Zm00001d007248_P001	Maize	cytosol, endoplasmic reticulum, nucleus	27.91	28.84
CDY09911	Canola	nucleus	28.44	27.23
Zm00001d048682_P001	Maize	nucleus	30.23	26.87
Zm00001d006701_P001	Maize	cytosol	25.04	25.27
Zm00001d021946_P001	Maize	cytosol	25.04	25.09
Zm00001d048199_P001	Maize	mitochondrion, nucleus	23.43	24.44
Zm00001d030500_P001	Maize	nucleus	23.08	23.8
Zm00001d038225_P001	Maize	cytosol	21.65	21.57
Zm00001d006551_P001	Maize	golgi, mitochondrion	22.18	20.1
Zm00001d051461_P001	Maize	cytosol	18.6	17.13
Zm00001d026050_P001	Maize	mitochondrion, nucleus, plastid	18.07	16.21
Zm00001d048603_P001	Maize	cytosol	40.79	16.02
Zm00001d002573_P001	Maize	cytosol	17.71	15.89

Protein Annotations

MapMan:15.5.12	UniProt:A0A1D6L9Y8	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	ProteinID:ONM10951.1	PFAM:PF03514
PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF23	InterPro:TF_GRAS	UniParc:UPI000842AB1B	EnsemblPlantsGene:Zm00001d034664
EnsemblPlants:Zm00001d034664_P001	EnsemblPlants:Zm00001d034664_T001	SEG:seg	:	:	:

Description

GRAS-transcription factor 40

Coordinates

chr1:+:299204252..299206111

Molecular Weight (calculated)

63323.1 Da

IEP (calculated)

6.635

GRAVY (calculated)

-0.412

Length

559 amino acids

Sequence
(BLAST)

001: MISFSLQQPQ LQFFPSYGFH GHSHSSPVSS HPSPPSAMPG CTTPSPASTT TTEPDSVEDF SETVADDAVL AYINQFLLED EDEESYPITS APVEDSALLA
101: AVEKPFVDIL ESAKPIAAQG YEVKSWITDD CDSTGSGRFR DVVTSSLPRE MVREGLVGAA HKGQKNPRDE DMEMEGRKSK QSALCDEETV REMFDKAAAI
201: DDHRNSSELL KQIRKHSSAT GDAGQRLAHY FADGLEARLA GSGSSIYRSL AAKRTSTGDI LKAFSLYVKA CPFRILSHYV ANTTILNATK SATRLHIIDY
301: GIMYGFQWPV LMQRLSKRPG GPPYLRITGI DFPLSGFRPA ERVEATGRRL HEYARMFNVP FEYQAIAAKW DTIQVKDLNM KSDEFVVVNC LYRMRNMMDE
401: TVTDDSPRTR VLNTIRKLNP HLFVHGIVNG TYNAPFFVTR FKEAMFFFSS IFDMLEANAL RMDEHRLLIE REFFGREAVN VIACEGTERI ERPETYKQWQ
501: MRNLRAGFRQ LALDREIMKR ARYKVSKSYQ GDFLVDEDNK WMLQGWKGRI IYALSAWTS

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.