Factsheet for Zm00001d033166_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU91407	Sorghum	nucleus	77.46	82.65
OQU91406	Sorghum	nucleus	84.15	82.35
HORVU3Hr1G012520.1	Barley	cytosol	40.98	65.79
HORVU3Hr1G012550.6	Barley	cytosol	49.04	60.23
TraesCS3D01G067700.1	Wheat	cytosol	54.78	55.54
TraesCS3D01G067800.1	Wheat	nucleus	50.82	55.03
TraesCS3D01G067900.1	Wheat	nucleus	51.37	54.49
TraesCS3A01G067900.1	Wheat	cytosol	53.55	54.29
TraesCS3B01G080900.1	Wheat	nucleus	53.14	53.95
TraesCS3A01G068000.1	Wheat	nucleus	52.32	53.49
TraesCS3B01G081100.1	Wheat	nucleus	52.05	53.29
TraesCS3B01G081000.1	Wheat	cytosol	52.19	52.47
Solyc04g011630.1.1	Tomato	cytosol	12.16	52.35
CDX68389	Canola	cytosol	5.74	49.41
Zm00001d030744_P001	Maize	cytosol	31.69	47.15
VIT_06s0004g04990.t01	Wine grape	cytosol	26.78	44.34
Zm00001d035671_P001	Maize	cytosol	37.57	43.93
Zm00001d011070_P001	Maize	cytosol	36.75	42.9
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	18.44	42.59
CDX80265	Canola	endoplasmic reticulum, golgi	18.31	42.27
GSMUA_Achr8P02550_001	Banana	nucleus	21.86	40.82
Zm00001d028603_P001	Maize	cytosol	39.89	39.78
Zm00001d034664_P001	Maize	plastid	29.92	39.18
PGSC0003DMT400005480	Potato	cytosol	25.96	39.01
VIT_13s0019g01780.t01	Wine grape	nucleus	31.56	38.5
PGSC0003DMT400049420	Potato	cytosol	34.7	38.25
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	36.89	38.08
GSMUA_Achr6P34090_001	Banana	nucleus	31.69	37.91
KRH10240	Soybean	cytosol	30.87	37.29
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	31.97	37.14
PGSC0003DMT400016258	Potato	cytosol	36.75	36.95
CDY71578	Canola	nucleus, plastid	26.09	36.66
Zm00001d035670_P001	Maize	cytosol	36.34	36.64
Bra015584.1-P	Field mustard	cytosol	21.58	36.24
CDY47877	Canola	nucleus	30.46	36.08
VIT_06s0004g04970.t01	Wine grape	cytosol	32.38	36.02
Bra028391.1-P	Field mustard	nucleus	30.33	35.81
CDY39530	Canola	cytosol	30.19	35.7
VIT_13s0019g01710.t01	Wine grape	cytosol	35.38	35.63
KRH24780	Soybean	cytosol	32.1	35.61
VIT_06s0004g04980.t01	Wine grape	nucleus	34.02	35.37
KRH65839	Soybean	cytosol, plastid	35.25	35.34
KRH23095	Soybean	cytosol	31.56	35.16
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	32.24	35.07
CDY07777	Canola	cytosol, nucleus, peroxisome	32.24	35.07
VIT_13s0019g01810.t01	Wine grape	cytosol	35.79	35.03
KRH29773	Soybean	cytosol	29.37	35.02
CDX79750	Canola	peroxisome	32.24	35.01
Solyc09g010920.1.1	Tomato	cytosol	36.2	34.82
Solyc10g086530.1.1	Tomato	cytosol	36.2	34.82
VIT_13s0019g01790.t01	Wine grape	cytosol	34.02	34.63
Zm00001d047813_P002	Maize	nucleus	39.21	34.62
PGSC0003DMT400022997	Potato	cytosol, plastid	35.93	34.56
Zm00001d041536_P001	Maize	cytosol	33.47	34.51
VIT_06s0004g04950.t01	Wine grape	cytosol	35.52	34.48
Zm00001d048601_P001	Maize	cytosol	30.19	34.42
Bra033813.1-P	Field mustard	nucleus	27.32	34.36
KRH23094	Soybean	cytosol	25.96	34.36
KRH49113	Soybean	cytosol	34.43	34.33
KRG99969	Soybean	cytosol	34.56	34.33
KRH29774	Soybean	cytosol	29.51	34.23
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	30.19	34.21
AT3G46600.1	Thale cress	cytosol	27.19	34.13
AT2G37650.1	Thale cress	cytosol	33.2	33.84
KRH29775	Soybean	nucleus	31.01	33.73
VIT_13s0019g01700.t01	Wine grape	cytosol	34.84	33.55
Solyc05g053090.1.1	Tomato	cytosol	34.02	33.51
CDX82987	Canola	nucleus	27.46	33.44
Zm00001d048588_P001	Maize	cytosol	28.96	33.44
Solyc01g100200.2.1	Tomato	nucleus	30.33	33.33
KRH24775	Soybean	cytosol	30.87	33.24
CDY06266	Canola	cytosol	28.69	33.23
PGSC0003DMT400069949	Potato	cytosol	33.88	33.2
Zm00001d003553_P001	Maize	cytosol	27.46	33.11
CDX77228	Canola	cytosol	30.33	33.04
CDX86475	Canola	nucleus	31.97	32.96
AT5G59450.1	Thale cress	nucleus	27.46	32.95
GSMUA_AchrUn_...	Banana	cytosol	29.64	32.93
Solyc06g082530.1.1	Tomato	cytosol	29.37	32.92
KRH24773	Soybean	nucleus	30.87	32.9
Zm00001d042907_P001	Maize	cytosol	36.2	32.76
Zm00001d007248_P001	Maize	cytosol, endoplasmic reticulum, nucleus	24.18	32.72
KRH29771	Soybean	cytosol	30.33	32.65
AT2G29060.1	Thale cress	cytosol	30.87	32.56
CDY47878	Canola	nucleus	30.74	32.56
CDY33040	Canola	nucleus	26.5	32.5
KRH24778	Soybean	nucleus	29.92	32.4
PGSC0003DMT400078286	Potato	nucleus	29.51	32.38
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	32.79	32.3
Bra028390.1-P	Field mustard	cytosol	31.15	32.29
Zm00001d048604_P001	Maize	cytosol	33.74	32.29
Bra035653.1-P	Field mustard	cytosol	31.83	32.27
CDY31749	Canola	cytosol	31.69	31.96
Zm00001d048600_P001	Maize	nucleus	28.14	31.94
Zm00001d048681_P001	Maize	cytosol	24.73	31.81
KRH10241	Soybean	cytosol, nucleus, peroxisome	29.78	31.69
Bra031581.1-P	Field mustard	cytosol	28.83	31.59
PGSC0003DMT400077972	Potato	cytosol	32.38	31.52
CDY15616	Canola	nucleus	30.74	31.47
Solyc06g076280.1.1	Tomato	cytosol	32.1	31.42
CDX68388	Canola	cytosol	17.76	31.4
Zm00001d048682_P001	Maize	nucleus	26.91	31.32
KRH10243	Soybean	nucleus	28.42	31.28
Zm00001d048602_P001	Maize	cytosol	28.42	31.23
Bra030688.1-P	Field mustard	nucleus	31.69	31.22
AT1G07520.3	Thale cress	cytosol	29.64	31.18
KRH29779	Soybean	cytosol	31.56	31.13
CDY06265	Canola	cytosol	29.23	31.01
VIT_06s0004g04960.t01	Wine grape	nucleus	33.74	30.99
Bra031580.1-P	Field mustard	cytosol	29.1	30.87
KRH23090	Soybean	vacuole	25.96	30.6
CDY09912	Canola	cytosol	28.83	30.14
KRH23089	Soybean	cytosol	26.37	29.97
AT1G07530.1	Thale cress	cytosol	31.01	29.52
CDY09911	Canola	nucleus	22.95	28.77
Zm00001d007713_P001	Maize	cytosol	22.95	28.05
Zm00001d006701_P001	Maize	cytosol	19.13	25.27
Zm00001d021946_P001	Maize	cytosol	19.13	25.09
Zm00001d030500_P001	Maize	nucleus	17.76	23.99
Zm00001d038225_P001	Maize	cytosol	18.17	23.71
Zm00001d048199_P001	Maize	mitochondrion, nucleus	17.08	23.32
Zm00001d006551_P001	Maize	golgi, mitochondrion	17.35	20.58
Zm00001d051461_P001	Maize	cytosol	15.03	18.12
Zm00001d048603_P001	Maize	cytosol	33.74	17.36
Zm00001d026050_P001	Maize	mitochondrion, nucleus, plastid	13.52	15.89
Zm00001d002573_P001	Maize	cytosol	13.39	15.73

Protein Annotations

EnsemblPlants:Zm00001d033166_P001	EnsemblPlants:Zm00001d033166_T001	EnsemblPlantsGene:Zm00001d033166	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS
PANTHER:PTHR31636	PANTHER:PTHR31636:SF60	PFAM:PF03514	PFscan:PS50985	ProteinID:AIB05508.1	ProteinID:ONM06892.1
SEG:seg	UniParc:UPI0002218229	UniProt:A0A060D7B7	MapMan:15.5.12	:	:

Description

GRAS-transcription factor 16GRAS transcription factor (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A060D7B7]

Coordinates

chr1:+:252616117..252618315

Molecular Weight (calculated)

82799.8 Da

IEP (calculated)

6.547

GRAVY (calculated)

-0.485

Length

732 amino acids

Sequence
(BLAST)

001: MDFNDKPSSN FDEDFQSNMS ATSGFYSFIH PANESNELEL FLDQPRSAHH YPPVSNASND SGHITSTTSC STEICGPQFC DLSSNATPDW YGTSVTDSSN
101: NSWINSDITI SYLNKLLTDE DSDDKVKPHH GECALRAMEE PFYRILAQNN PAYPESPSLC SRGHLNNLGD NINKSLGQPC SSCSVAIDWS NSHSNHILQA
201: FEAPWSLSDV VKETSRSAEC TRNMELGVRI DGLSIAEKRS RDNQSLQVNV ADASKHTSSE LPSGNYSRQE DSYLIEARSS KQVAFSFNGP IRDEMFDRVL
301: LFSEHKPTYE AIVLQEMMAN KSTGHPQNEQ GRTPARRKMR GKKQQKKEVV DLRTILIHCA QAVSVNNHTL ANDMLNIIRQ HSSITGDDTQ RLAFCLVNCL
401: EARLAGTGSQ LYRNLIATCS DVAAILKVFQ LSLAVIPLLR VSHYFSNKTI LDVLKGKSKV HIVDFGICFG FQWPSLLEQL AKREGGPPKV RITGIDLPKQ
501: GFRPDRMNKQ NTGQRLADYA SMFNVPFEYQ AISSKWETIR IEDLNIDEDD VLIVNCIDRM KNLGDETVSI NSARNRVLNT IRMMKPKVFV HGIVNGSFGT
601: PFFLTRFKEV MYHYSAFFDI LDKTVPRDNE TRMLIERGIF LCQLLNVIAC EGSERIERPE NYKKWKSRNL NAGLEQLQLN PDIVKVTRDM MGKYHKDYVI
701: NEDDHWLLMG WKGRILNAIS TWKPSESYDG DY

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.