Factsheet for HORVU3Hr1G012520.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G012550.6	Barley	cytosol	82.24	62.92
TraesCS3D01G067700.1	Wheat	cytosol	93.2	58.86
TraesCS3B01G080900.1	Wheat	nucleus	91.45	57.84
TraesCS3A01G067900.1	Wheat	cytosol	90.35	57.06
CDX68389	Canola	cytosol	9.43	50.59
Solyc04g011630.1.1	Tomato	cytosol	18.86	50.59
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	30.04	43.22
CDX80265	Canola	endoplasmic reticulum, golgi	29.82	42.9
OQU91407	Sorghum	nucleus	64.25	42.71
VIT_06s0004g04990.t01	Wine grape	cytosol	41.01	42.31
Zm00001d033166_P001	Maize	nucleus	65.79	40.98
KXG38064	Sorghum	nucleus	63.6	40.28
OQU91406	Sorghum	nucleus	65.35	39.84
EER91260	Sorghum	nucleus	62.28	39.39
PGSC0003DMT400005480	Potato	cytosol	41.01	38.4
Bra015584.1-P	Field mustard	cytosol	35.09	36.7
CDY71578	Canola	nucleus, plastid	41.67	36.47
VIT_13s0019g01780.t01	Wine grape	nucleus	44.08	33.5
HORVU5Hr1G113620.1	Barley	cytosol, nucleus, peroxisome	47.15	33.39
KRH10240	Soybean	cytosol	43.2	32.51
PGSC0003DMT400049420	Potato	cytosol	47.15	32.38
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	44.52	32.22
HORVU1Hr1G004440.1	Barley	cytosol	50.44	31.99
Bra028391.1-P	Field mustard	nucleus	43.42	31.94
CDY47877	Canola	nucleus	43.2	31.88
CDY39530	Canola	cytosol	43.2	31.83
CDY33040	Canola	nucleus	41.23	31.49
GSMUA_Achr8P02550_001	Banana	nucleus	26.75	31.12
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	44.08	31.11
KRH29774	Soybean	cytosol	42.98	31.06
AT5G59450.1	Thale cress	nucleus	41.45	30.98
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	47.81	30.75
GSMUA_Achr6P34090_001	Banana	nucleus	40.79	30.39
Bra033813.1-P	Field mustard	nucleus	38.6	30.24
KRH29773	Soybean	cytosol	40.57	30.13
KRH23094	Soybean	cytosol	36.4	30.02
AT3G46600.1	Thale cress	cytosol	38.38	30.02
KRH24780	Soybean	cytosol	43.42	30.0
KRH23095	Soybean	cytosol	42.98	29.83
PGSC0003DMT400016258	Potato	cytosol	47.59	29.81
Solyc05g053090.1.1	Tomato	cytosol	48.46	29.74
Solyc01g100200.2.1	Tomato	nucleus	43.42	29.73
PGSC0003DMT400069949	Potato	cytosol	48.68	29.72
CDX79750	Canola	peroxisome	43.86	29.67
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	43.64	29.57
CDY07777	Canola	cytosol, nucleus, peroxisome	43.64	29.57
VIT_06s0004g04970.t01	Wine grape	cytosol	42.32	29.33
CDX82987	Canola	nucleus	38.6	29.28
KRH29775	Soybean	nucleus	43.2	29.27
Solyc06g082530.1.1	Tomato	cytosol	41.45	28.94
KRH24773	Soybean	nucleus	43.42	28.82
CDY06266	Canola	cytosol	39.91	28.8
KRH24778	Soybean	nucleus	42.54	28.7
VIT_06s0004g04980.t01	Wine grape	nucleus	44.3	28.69
HORVU5Hr1G045020.29	Barley	cytosol	49.34	28.59
KRH29771	Soybean	cytosol	42.54	28.53
Solyc10g086530.1.1	Tomato	cytosol	47.59	28.52
CDY47878	Canola	nucleus	43.2	28.51
KRH65839	Soybean	cytosol, plastid	45.39	28.36
VIT_13s0019g01810.t01	Wine grape	cytosol	46.49	28.34
HORVU4Hr1G027520.2	Barley	cytosol, peroxisome	40.57	28.33
PGSC0003DMT400078286	Potato	nucleus	41.23	28.19
AT2G37650.1	Thale cress	cytosol	44.3	28.13
KRH24775	Soybean	cytosol	41.89	28.09
VIT_13s0019g01710.t01	Wine grape	cytosol	44.74	28.06
Solyc09g010920.1.1	Tomato	cytosol	46.71	27.99
Bra028390.1-P	Field mustard	cytosol	43.2	27.9
CDX86475	Canola	nucleus	43.42	27.89
VIT_13s0019g01790.t01	Wine grape	cytosol	43.86	27.82
HORVU4Hr1G027900.1	Barley	cytosol	40.35	27.79
KRH49113	Soybean	cytosol	44.74	27.79
CDX68388	Canola	cytosol	25.22	27.78
HORVU4Hr1G027610.1	Barley	cytosol	41.23	27.77
PGSC0003DMT400022997	Potato	cytosol, plastid	46.27	27.73
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	45.18	27.73
KRG99969	Soybean	cytosol	44.52	27.54
VIT_13s0019g01700.t01	Wine grape	cytosol	45.83	27.5
KRH10241	Soybean	cytosol, nucleus, peroxisome	41.23	27.33
HORVU4Hr1G080460.5	Barley	cytosol	34.87	27.32
CDX77228	Canola	cytosol	40.13	27.23
Bra031581.1-P	Field mustard	cytosol	39.69	27.1
AT2G29060.1	Thale cress	cytosol	41.23	27.09
VIT_06s0004g04950.t01	Wine grape	cytosol	44.74	27.06
KRH23089	Soybean	cytosol	37.94	26.86
CDY06265	Canola	cytosol	40.57	26.81
CDY15616	Canola	nucleus	41.89	26.71
GSMUA_AchrUn_...	Banana	cytosol	38.6	26.71
Bra031580.1-P	Field mustard	cytosol	40.35	26.67
KRH29779	Soybean	cytosol	43.2	26.55
HORVU3Hr1G086210.1	Barley	cytosol, nucleus, plasma membrane	46.05	26.55
Bra030688.1-P	Field mustard	nucleus	43.2	26.51
AT1G07520.3	Thale cress	cytosol	40.35	26.44
KRH10243	Soybean	nucleus	38.38	26.32
CDY09912	Canola	cytosol	40.13	26.14
HORVU5Hr1G020900.1	Barley	cytosol	42.54	26.04
Bra035653.1-P	Field mustard	cytosol	41.23	26.04
CDY31749	Canola	cytosol	41.23	25.9
Solyc06g076280.1.1	Tomato	cytosol	42.32	25.8
KRH23090	Soybean	vacuole	35.09	25.76
PGSC0003DMT400077972	Potato	cytosol	42.11	25.53
HORVU4Hr1G027480.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	38.38	24.75
AT1G07530.1	Thale cress	cytosol	41.67	24.71
HORVU4Hr1G027920.1	Barley	peroxisome	41.67	23.96
VIT_06s0004g04960.t01	Wine grape	nucleus	41.45	23.71
CDY09911	Canola	nucleus	29.39	22.95
HORVU2Hr1G036280.1	Barley	cytosol	27.41	22.44
HORVU2Hr1G043780.1	Barley	cytosol	26.32	21.05
HORVU3Hr1G091250.1	Barley	cytosol	25.44	21.01
HORVU4Hr1G071670.1	Barley	cytosol	24.56	20.9
HORVU5Hr1G099160.1	Barley	plastid	25.22	18.25
HORVU2Hr1G094040.2	Barley	cytosol, plastid	13.16	15.58

Protein Annotations

EnsemblPlants:HORVU3Hr1G012520.1	EnsemblPlantsGene:HORVU3Hr1G012520	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636
PANTHER:PTHR31636:SF60	PFAM:PF03514	PFscan:PS50985	SEG:seg	UniParc:UPI000B46B9C8	UniProt:A0A287K4G7
MapMan:15.5.12	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:27025471..27026840

Molecular Weight (calculated)

52642.6 Da

IEP (calculated)

10.027

GRAVY (calculated)

-0.441

Length

456 amino acids

Sequence
(BLAST)

001: DLLEGRRNKQ IALFSDEPTR NDAFDKVLLC SEQKPIDEGI ILQRTMAGTS TRYAQKEQGR KAARQKKGGK TKKKEVVDLR TLLIHCARAV SVNNHNLASD
101: ILKSIRQHSS PSGDDTQRLA FYLADCLEIR LSGNGSQINR NFMATPRNAA YILKLFHLCF TVSHYLRSSY YFSNKTILDV SKGKSQVHIV DFGICFGFQW
201: PSLLKQFADR EGGPPKLRIT GIELPLPGFQ PHGRKNYTQL RLVEYASMFK VPLEYRQISS KWESISIEDL NINKGEVLIV NCINRMKNIP DETISINSAR
301: NRVLNTIKMM KPKVFIHGVV NGSYNTPFFL SRFKEVMYHY ASLFDMLDKT TPRDNETRLI LERDIYKYEI LNVIACEGSE RIERPESYKK WKVRSLRAKF
401: EQLPLNPTIV KGIHHIVRQI YHKDLFVDEE DQFLVLGWKG RIVYALSTWK PSESNN

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.