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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY47878 Canola nucleus 96.74 98.84
CDY71578 Canola nucleus, plastid 71.67 97.12
AT2G29060.1 Thale cress cytosol 75.5 76.8
Bra035653.1-P Field mustard cytosol 73.37 71.75
Bra030688.1-P Field mustard nucleus 68.98 65.55
KRH24780 Soybean cytosol 48.87 52.27
GSMUA_Achr10P... Banana nucleus 30.45 48.64
Bra002564.1-P Field mustard endoplasmic reticulum, golgi 21.67 48.27
KRH29779 Soybean cytosol 50.14 47.71
VIT_06s0004g04950.t01 Wine grape cytosol 50.0 46.82
GSMUA_Achr8P02550_001 Banana nucleus 25.07 45.15
TraesCS1B01G037500.1 Wheat cytosol 26.2 44.79
GSMUA_Achr10P... Banana cytosol 37.25 43.91
Bra028391.1-P Field mustard nucleus 38.24 43.55
HORVU3Hr1G012520.1 Barley cytosol 27.9 43.2
KRH10243 Soybean nucleus 40.51 43.01
KRH23089 Soybean cytosol 39.09 42.86
VIT_06s0004g04960.t01 Wine grape nucleus 48.16 42.66
GSMUA_Achr7P15080_001 Banana cytosol 35.84 42.31
KRH23090 Soybean vacuole 36.97 42.03
Bra015584.1-P Field mustard cytosol 25.78 41.74
Zm00001d034664_P001 Maize plastid 32.01 40.43
KXG38103 Sorghum cytosol 35.84 40.42
OQU92829 Sorghum cytosol 41.93 40.33
Bra000012.1-P Field mustard cytosol, nucleus, peroxisome 38.24 40.12
GSMUA_Achr6P34090_001 Banana nucleus 34.7 40.03
Os03t0690600-03 Rice cytosol 41.36 39.95
Zm00001d028603_P001 Maize cytosol 41.5 39.92
KXG21079 Sorghum cytosol 34.99 39.65
Bra031581.1-P Field mustard cytosol 37.39 39.52
Os04t0590400-01 Rice cytosol, nucleus, peroxisome 35.55 39.47
KXG21080 Sorghum cytosol 34.56 38.98
Zm00001d011070_P001 Maize cytosol 34.56 38.92
Bra033813.1-P Field mustard nucleus 31.87 38.66
Bra031580.1-P Field mustard cytosol 37.54 38.41
Zm00001d035671_P001 Maize cytosol 33.85 38.18
HORVU5Hr1G113620.1 Barley cytosol, nucleus, peroxisome 33.85 37.11
TraesCS5B01G494500.1 Wheat cytosol 34.42 36.99
TraesCS5D01G494900.1 Wheat cytosol 34.42 36.99
TraesCS5A01G481300.1 Wheat cytosol 34.28 36.95
KXG37250 Sorghum cytosol 33.99 36.87
HORVU3Hr1G012550.6 Barley cytosol 31.02 36.74
TraesCS5D01G152700.1 Wheat cytosol, plastid 39.94 36.43
TraesCS5A01G139000.1 Wheat cytosol, plastid 39.94 36.34
TraesCS5B01G138100.1 Wheat cytosol, plastid 39.8 36.21
GSMUA_AchrUn_... Banana cytosol 33.43 35.81
HORVU5Hr1G045020.29 Barley cytosol 39.8 35.71
Zm00001d047813_P002 Maize nucleus 41.08 34.98
TraesCS1B01G037300.1 Wheat cytosol 33.85 33.95
Bra026077.1-P Field mustard cytosol 13.88 33.33
TraesCS3B01G080900.1 Wheat nucleus 33.85 33.15
EER91260 Sorghum nucleus 33.85 33.15
TraesCS3D01G067700.1 Wheat cytosol 33.85 33.1
TraesCS3D01G067900.1 Wheat nucleus 32.29 33.04
TraesCS1D01G031000.1 Wheat cytosol 33.71 32.83
TraesCS3A01G067900.1 Wheat cytosol 33.57 32.83
TraesCS1D01G030900.1 Wheat cytosol 33.14 32.82
OQU91407 Sorghum nucleus 31.87 32.8
KXG38064 Sorghum nucleus 33.43 32.78
TraesCS3D01G067800.1 Wheat nucleus 31.3 32.69
HORVU1Hr1G004440.1 Barley cytosol 33.29 32.68
Zm00001d035670_P001 Maize cytosol 33.57 32.64
EES18882 Sorghum cytosol 33.85 32.61
TraesCS1A01G030300.1 Wheat cytosol 32.58 32.58
TraesCS3A01G068000.1 Wheat nucleus 32.72 32.26
TraesCS1D01G030800.1 Wheat cytosol 32.01 32.24
Bra015156.1-P Field mustard cytosol 14.31 31.76
TraesCS3B01G081100.1 Wheat nucleus 32.15 31.75
TraesCS3B01G081000.1 Wheat cytosol 32.58 31.59
OQU91406 Sorghum nucleus 33.43 31.55
TraesCS1B01G037400.1 Wheat cytosol 32.29 31.54
TraesCS1D01G031200.1 Wheat cytosol 32.29 31.28
EES18880 Sorghum cytosol 32.72 31.17
Zm00001d033166_P001 Maize nucleus 32.29 31.15
TraesCS1A01G030200.1 Wheat cytosol 31.73 31.07
TraesCS1B01G037200.1 Wheat nucleus 31.73 29.59
Bra036185.1-P Field mustard cytosol 19.26 27.47
Bra020715.1-P Field mustard cytosol, plastid 19.26 27.36
Bra026237.1-P Field mustard plastid 20.54 27.1
Bra017915.1-P Field mustard cytoskeleton, cytosol, nucleus, plastid 15.58 26.96
Bra018860.1-P Field mustard nucleus 19.97 26.86
Bra021063.1-P Field mustard plastid 19.83 26.42
Bra012280.1-P Field mustard cytosol 17.28 22.22
Bra028312.1-P Field mustard cytosol 13.74 21.37
Bra022596.1-P Field mustard plastid 15.44 18.83
Protein Annotations
EnsemblPlants:Bra028390.1EnsemblPlants:Bra028390.1-PEnsemblPlantsGene:Bra028390GO:GO:0006139GO:GO:0006351GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR005202InterPro:TF_GRAS
PANTHER:PTHR31636PANTHER:PTHR31636:SF132PFAM:PF03514PFscan:PS50985SEG:segUniParc:UPI00025431D5
UniProt:M4EHX5MapMan:15.5.12::::
Description
AT2G29060 (E=5e-245) | scarecrow transcription factor family protein
Coordinates
chrA02:+:20799..22919
Molecular Weight (calculated)
80034.2 Da
IEP (calculated)
6.679
GRAVY (calculated)
-0.559
Length
706 amino acids
Sequence
(BLAST)
001: MGSYSAGFPG SFDNFDFNYG DGFYLDDQAL LEIPSPFPPP PPAPPHPDPY SHAADAESDF SDSVLKYISQ VLMEEDMEEK PCMFHDALSL QAAEKSLYEA
101: LGQKYPDHPE RLAHSPDGSS PGYASSTTSS DWSFDCLENS RRPSWLHSPI SNNFVFQSTR SNPKPSGGSN VALKSSFNND LVSNMFNDSE LAFQFNRGKE
201: EASKFLPKSS QLVIDVESYI PPNNDPKEHH SVLPYRSTGK KKHWREDEHF LSEERSKKQS AVYVDEAELS EMFDKVLLFG RPKEQPLCIL NDNFIKETAK
301: DDSSSSYKSD TTQQKHAASG NSYKKETTPD LRTLLVSCAQ AVSSNDRKMA EDLLRQVRQH SSSHGDGTER LAHYLADSLE ARLAGTGTQI YTALSSKKTS
401: ASDMLKAYQT YISVCPFKKT AIIFANHSIM HLAPTDAKTI HIIDFGISYG FQWPPLIHRL AWRRGGSCKL RITGIELPQR GFRPAEGVNE TGERLARYCQ
501: RYNVPFEYNG IAQKWETIKL EDLKLREGEF VAVNSLFRFR NLLDETVAVH SPRDAVLKLI KKIKPNVFIP AVLSGSYNAP FFVTRFREVL FHYSSLFDMC
601: DTSLPRGDPM RVMFEKEFYG REIMNVVACE GSERVERPES YKQWQARAMR AGFRQLTLEK ELVQKLKLMV ESGYRSKEFD VDQDGNWLLQ GWKGRIVYAS
701: CTLVPM
Best Arabidopsis Sequence Match ( AT2G29060.1 )
(BLAST)
001: MGSYSAGFPG SLDWFDFPGL GNGSYLNDQP LLDIGSVPPP LDPYPQQNLA SADADFSDSV LKYISQVLME EDMEDKPCMF HDALSLQAAE KSLYEALGEK
101: YPVDDSDQPL TTTTSLAQLV SSPGGSSYAS STTTTSSDSQ WSFDCLENNR PSSWLQTPIP SNFIFQSTST RASSGNAVFG SSFSGDLVSN MFNDTDLALQ
201: FKKGMEEASK FLPKSSQLVI DNSVPNRLTG KKSHWREEEH LTEERSKKQS AIYVDETDEL TDMFDNILIF GEAKEQPVCI LNESFPKEPA KASTFSKSPK
301: GEKPEASGNS YTKETPDLRT MLVSCAQAVS INDRRTADEL LSRIRQHSSS YGDGTERLAH YFANSLEARL AGIGTQVYTA LSSKKTSTSD MLKAYQTYIS
401: VCPFKKIAII FANHSIMRLA SSANAKTIHI IDFGISDGFQ WPSLIHRLAW RRGSSCKLRI TGIELPQRGF RPAEGVIETG RRLAKYCQKF NIPFEYNAIA
501: QKWESIKLED LKLKEGEFVA VNSLFRFRNL LDETVAVHSP RDTVLKLIRK IKPDVFIPGI LSGSYNAPFF VTRFREVLFH YSSLFDMCDT NLTREDPMRV
601: MFEKEFYGRE IMNVVACEGT ERVERPESYK QWQARAMRAG FRQIPLEKEL VQKLKLMVES GYKPKEFDVD QDCHWLLQGW KGRIVYGSSI WVPL
Arabidopsis Description
SCL33Scarecrow-like protein 33 [Source:UniProtKB/Swiss-Prot;Acc:P0C883]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.