Factsheet for GSMUA_Achr7P15080_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	63.04	85.29
GSMUA_Achr10P...	Banana	cytosol	68.06	67.95
GSMUA_Achr8P02550_001	Banana	nucleus	41.47	63.27
GSMUA_Achr5P08320_001	Banana	cytosol	41.3	55.01
Os03t0690600-03	Rice	cytosol	65.22	53.35
CDX68389	Canola	cytosol	7.53	52.94
Zm00001d028603_P001	Maize	cytosol	64.55	52.59
OQU92829	Sorghum	cytosol	64.21	52.32
TraesCS5D01G152700.1	Wheat	cytosol, plastid	61.87	47.8
TraesCS5A01G139000.1	Wheat	cytosol, plastid	61.87	47.68
TraesCS5B01G138100.1	Wheat	cytosol, plastid	61.71	47.55
HORVU5Hr1G045020.29	Barley	cytosol	62.21	47.27
Zm00001d047813_P002	Maize	nucleus	63.55	45.84
GSMUA_Achr6P34090_001	Banana	nucleus	46.32	45.26
VIT_06s0004g04990.t01	Wine grape	cytosol	33.28	45.02
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	52.84	44.57
PGSC0003DMT400049420	Potato	cytosol	47.49	42.77
GSMUA_AchrUn_...	Banana	cytosol	46.49	42.19
PGSC0003DMT400016258	Potato	cytosol	51.0	41.9
KRH65839	Soybean	cytosol, plastid	49.67	40.68
VIT_13s0019g01780.t01	Wine grape	nucleus	40.8	40.67
VIT_13s0019g01700.t01	Wine grape	cytosol	51.17	40.26
PGSC0003DMT400005480	Potato	cytosol	32.78	40.25
Solyc05g053090.1.1	Tomato	cytosol	50.0	40.24
VIT_13s0019g01810.t01	Wine grape	cytosol	50.33	40.24
KRH29773	Soybean	cytosol	41.3	40.23
VIT_13s0019g01790.t01	Wine grape	cytosol	47.83	39.78
PGSC0003DMT400069949	Potato	cytosol	49.5	39.63
VIT_13s0019g01710.t01	Wine grape	cytosol	48.16	39.61
Solyc09g010920.1.1	Tomato	cytosol	50.33	39.55
KRH24780	Soybean	cytosol	43.65	39.55
KRH10240	Soybean	cytosol	39.8	39.27
PGSC0003DMT400022997	Potato	cytosol, plastid	49.83	39.16
Solyc10g086530.1.1	Tomato	cytosol	49.67	39.03
KRG99969	Soybean	cytosol	47.66	38.67
KRH49113	Soybean	cytosol	47.32	38.56
CDX79750	Canola	peroxisome	42.81	37.98
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	42.64	37.89
CDY07777	Canola	cytosol, nucleus, peroxisome	42.64	37.89
CDY71578	Canola	nucleus, plastid	32.94	37.81
VIT_06s0004g04950.t01	Wine grape	cytosol	47.16	37.4
VIT_06s0004g04980.t01	Wine grape	nucleus	43.98	37.36
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	19.73	37.22
Solyc06g076280.1.1	Tomato	cytosol	46.49	37.17
KRH24773	Soybean	nucleus	42.64	37.12
PGSC0003DMT400077972	Potato	cytosol	46.66	37.1
KRH29771	Soybean	cytosol	42.14	37.06
KRH29779	Soybean	cytosol	45.82	36.93
CDX80265	Canola	endoplasmic reticulum, golgi	19.57	36.91
CDX86475	Canola	nucleus	43.81	36.9
KRH29774	Soybean	cytosol	38.8	36.77
VIT_06s0004g04970.t01	Wine grape	cytosol	40.3	36.63
KRH29775	Soybean	nucleus	41.14	36.55
AT2G37650.1	Thale cress	cytosol	43.81	36.49
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	38.13	36.19
Bra028391.1-P	Field mustard	nucleus	37.46	36.13
CDY47877	Canola	nucleus	37.29	36.08
KRH23095	Soybean	cytosol	39.63	36.07
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	44.82	36.07
CDY47878	Canola	nucleus	41.64	36.03
Bra028390.1-P	Field mustard	cytosol	42.31	35.84
KRH24775	Soybean	cytosol	40.64	35.74
CDY39530	Canola	cytosol	36.96	35.7
KRH24778	Soybean	nucleus	40.13	35.5
KRH23094	Soybean	cytosol	32.78	35.44
AT3G46600.1	Thale cress	cytosol	34.45	35.33
KRH10241	Soybean	cytosol, nucleus, peroxisome	40.64	35.32
Solyc04g011630.1.1	Tomato	cytosol	10.03	35.29
Bra030688.1-P	Field mustard	nucleus	43.65	35.13
AT2G29060.1	Thale cress	cytosol	40.47	34.87
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	37.63	34.83
CDY15616	Canola	nucleus	41.64	34.83
Bra035653.1-P	Field mustard	cytosol	41.97	34.76
AT1G07530.1	Thale cress	cytosol	44.48	34.59
KRH10243	Soybean	nucleus	38.46	34.59
CDX68388	Canola	cytosol	23.91	34.54
Solyc06g082530.1.1	Tomato	cytosol	37.63	34.46
CDY31749	Canola	cytosol	41.81	34.44
Bra015584.1-P	Field mustard	cytosol	25.08	34.4
VIT_06s0004g04960.t01	Wine grape	nucleus	45.82	34.38
CDX77228	Canola	cytosol	38.63	34.38
Bra033813.1-P	Field mustard	nucleus	33.44	34.36
KRH23089	Soybean	cytosol	36.79	34.16
CDX82987	Canola	nucleus	33.78	33.61
PGSC0003DMT400078286	Potato	nucleus	37.46	33.58
KRH23090	Soybean	vacuole	34.62	33.33
CDY06266	Canola	cytosol	35.12	33.23
Solyc01g100200.2.1	Tomato	nucleus	36.96	33.18
Bra031581.1-P	Field mustard	cytosol	36.12	32.34
AT5G59450.1	Thale cress	nucleus	32.94	32.3
CDY33040	Canola	nucleus	31.77	31.83
AT1G07520.3	Thale cress	cytosol	36.79	31.61
CDY06265	Canola	cytosol	35.62	30.87
Bra031580.1-P	Field mustard	cytosol	35.28	30.58
CDY09912	Canola	cytosol	35.62	30.43
CDY09911	Canola	nucleus	26.25	26.88
GSMUA_Achr6P11780_001	Banana	cytosol	14.21	24.85
GSMUA_Achr4P07010_001	Banana	cytosol	12.21	22.26
GSMUA_Achr10P...	Banana	cytosol	19.23	20.83
GSMUA_Achr6P24310_001	Banana	cytosol	18.39	20.56
GSMUA_Achr3P02410_001	Banana	nucleus	19.57	19.93
GSMUA_Achr4P11050_001	Banana	nucleus	13.04	19.65
GSMUA_AchrUn_...	Banana	nucleus	14.05	19.63
GSMUA_Achr4P26400_001	Banana	cytosol, mitochondrion, plastid	15.89	16.27
GSMUA_Achr8P03610_001	Banana	cytosol	3.85	15.97
GSMUA_AchrUn_...	Banana	plastid	15.55	15.9
GSMUA_Achr9P18770_001	Banana	cytosol	14.55	15.29
GSMUA_Achr5P12810_001	Banana	cytosol, plastid	14.21	15.12
GSMUA_Achr4P24960_001	Banana	cytosol	12.21	15.05
GSMUA_Achr1P03650_001	Banana	mitochondrion	14.21	14.91
GSMUA_Achr9P12070_001	Banana	mitochondrion, plastid	11.2	12.88
GSMUA_Achr9P24710_001	Banana	endoplasmic reticulum, plastid	10.37	10.63

Protein Annotations

MapMan:15.5.12	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr7G15080_001	EnsemblPlants:GSMUA_Achr7P15080_001	EnsemblPlants:GSMUA_Achr7T15080_001	InterPro:IPR005202
UniProt:M0THP5	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF44	InterPro:TF_GRAS
UniParc:UPI00029563EB	SEG:seg	:	:	:	:

Description

Putative Scarecrow-like protein 9 [Source:GMGC_GENE;Acc:GSMUA_Achr7G15080_001]

Coordinates

chr7:-:12092422..12095073

Molecular Weight (calculated)

67394.7 Da

IEP (calculated)

6.441

GRAVY (calculated)

-0.471

Length

598 amino acids

Sequence
(BLAST)

001: MVMDSGLREL SGMMSGLSYD DFYSDQNIFR AIGLGESQPF LGHVNYVDLA QMSSLTNQSS YPTSISTSVE GDNPEDSDIF YSDIALNYIS RMLLEEDIDE
101: KVSTYKEDSA LRAAVKPFYD ILGQKYPPSP DRPLRVADNS SVCDSSDYQQ SLTCPGSVDY SPQTPSSSYN SISSIEEPFN NVTISPNLFF GSMPTWHFKR
201: GVEEARKFLP SNDKLFINLE SNGDLDLTEG RNNKQSAVSS DGEVRSEMFD MVLLYQGDKC SKKMSDLREA MQNEASKSAQ NVPTKGSSGG KTRRKKQTKK
301: EVVDLRTLLI LCAQAVAVDD RRTANELLKQ IRQHSSPNGD GSQRLAHCFA DGLEARLAGM GSQIYQALVA KRTTATDILK AYHLYLAACP FKRISHFFSN
401: QTILNLAEKA SKVHIIDFGI YFGFQWPCLI QRLATREGGP PKLRITGIDV PQPGFRPTER IEETGQRLAA YAKGFNVPFE YQAIASKWES IRVEDLHIAK
501: DEVVVVNCLY RFRNLIDETV IVDKRVERPE TYKQWQVRNL RAGFVQLPLD PDIMKKANDK VKSCYHKDFV IDEDSRWLIQ GWKGRITYAI SAWKPTEA

Best Arabidopsis Sequence Match ( AT2G37650.1 )
(BLAST)

001: MITEPSLTGI SGMVNRNRLS GLPDQPSSHS FTPVTLYDGF NYNLSSDHIN TVVAAPENSV FIREEEEEED PADDFDFSDA VLGYISQMLN EEDMDDKVCM
101: LQESLDLEAA ERSLYEAIGK KYPPSPERNL AFAERNSENL DRVVPGNYTG GDCIGFGNGG IKPLSSGFTL DFRNPQSCSS ILSVPQSNGL ITIYGDGIDE
201: SSKNNRENHQ SVWLFRREIE EANRFNPEEN ELIVNFREEN CVSKARKNSS RDEICVEEER SSKLPAVFGE DILRSDVVDK ILVHVPGGES MKEFNALRDV
301: LKKGVEKKKA SDAQGGKRRA RGRGRGRGRG GGGGQNGKKE VVDLRSLLIH CAQAVAADDR RCAGQLLKQI RLHSTPFGDG NQRLAHCFAN GLEARLAGTG
401: SQIYKGIVSK PRSAAAVLKA HQLFLACCPF RKLSYFITNK TIRDLVGNSQ RVHVIDFGIL YGFQWPTLIH RFSMYGSPKV RITGIEFPQP GFRPAQRVEE
501: TGQRLAAYAK LFGVPFEYKA IAKKWDAIQL EDLDIDRDEI TVVNCLYRAE NLHDESVKVE SCRDTVLNLI GKINPDLFVF GIVNGAYNAP FFVTRFREAL
601: FHFSSIFDML ETIVPREDEE RMFLEMEVFG REALNVIACE GWERVERPET YKQWHVRAMR SGLVQVPFDP SIMKTSLHKV HTFYHKDFVI DQDNRWLLQG
701: WKGRTVMALS VWKPESKA

Arabidopsis Description

SCL9Scarecrow-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80933]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.