Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06265 | Canola | cytosol | 77.73 | 78.41 |
| Bra031580.1-P | Field mustard | cytosol | 77.59 | 78.26 |
| CDY09912 | Canola | cytosol | 78.02 | 77.57 |
| CDY06266 | Canola | cytosol | 69.97 | 77.06 |
| Bra015584.1-P | Field mustard | cytosol | 47.99 | 76.61 |
| Bra031581.1-P | Field mustard | cytosol | 72.56 | 75.6 |
| CDY09911 | Canola | nucleus | 58.62 | 69.86 |
| AT2G29065.1 | Thale cress | cytosol, nucleus, plastid | 57.61 | 63.65 |
| KRH29773 | Soybean | cytosol | 40.66 | 46.09 |
| PGSC0003DMT400005480 | Potato | cytosol | 32.04 | 45.79 |
| KRH29774 | Soybean | cytosol | 41.38 | 45.64 |
| KRH29775 | Soybean | nucleus | 42.1 | 43.54 |
| KRH24778 | Soybean | nucleus | 41.81 | 43.05 |
| GSMUA_Achr10P... | Banana | nucleus | 27.01 | 42.53 |
| KRH24775 | Soybean | cytosol | 41.52 | 42.5 |
| Solyc06g076280.1.1 | Tomato | cytosol | 45.4 | 42.25 |
| KRH23091 | Soybean | endoplasmic reticulum, plasma membrane | 44.97 | 42.13 |
| PGSC0003DMT400077972 | Potato | cytosol | 45.11 | 41.76 |
| KRH10241 | Soybean | cytosol, nucleus, peroxisome | 40.8 | 41.28 |
| HORVU3Hr1G012520.1 | Barley | cytosol | 26.44 | 40.35 |
| AT3G46600.1 | Thale cress | cytosol | 33.19 | 39.62 |
| GSMUA_Achr10P... | Banana | cytosol | 33.91 | 39.4 |
| Os04t0590400-01 | Rice | cytosol, nucleus, peroxisome | 35.78 | 39.15 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 22.84 | 38.5 |
| AT1G07530.1 | Thale cress | cytosol | 41.67 | 37.71 |
| Zm00001d034664_P001 | Maize | plastid | 30.17 | 37.57 |
| AT2G29060.1 | Thale cress | cytosol | 37.21 | 37.32 |
| HORVU5Hr1G113620.1 | Barley | cytosol, nucleus, peroxisome | 34.2 | 36.96 |
| KXG38103 | Sorghum | cytosol | 33.19 | 36.9 |
| GSMUA_Achr7P15080_001 | Banana | cytosol | 31.61 | 36.79 |
| AT5G59450.1 | Thale cress | nucleus | 32.18 | 36.72 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 34.48 | 36.53 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 34.34 | 36.49 |
| KXG21080 | Sorghum | cytosol | 32.76 | 36.42 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 34.34 | 36.38 |
| GSMUA_Achr6P34090_001 | Banana | nucleus | 31.9 | 36.27 |
| Os03t0690600-03 | Rice | cytosol | 38.07 | 36.25 |
| OQU92829 | Sorghum | cytosol | 38.07 | 36.1 |
| Zm00001d028603_P001 | Maize | cytosol | 37.79 | 35.83 |
| KXG21079 | Sorghum | cytosol | 32.04 | 35.79 |
| Zm00001d035671_P001 | Maize | cytosol | 32.04 | 35.62 |
| GSMUA_Achr8P02550_001 | Banana | nucleus | 19.83 | 35.2 |
| Zm00001d011070_P001 | Maize | cytosol | 31.47 | 34.93 |
| AT2G37650.1 | Thale cress | cytosol | 35.49 | 34.4 |
| KXG37250 | Sorghum | cytosol | 32.04 | 34.26 |
| HORVU3Hr1G012550.6 | Barley | cytosol | 29.17 | 34.06 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 36.78 | 32.99 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 36.64 | 32.95 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 36.64 | 32.86 |
| HORVU5Hr1G045020.29 | Barley | cytosol | 36.78 | 32.53 |
| Zm00001d047813_P002 | Maize | nucleus | 37.93 | 31.85 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 30.75 | 31.01 |
| GSMUA_AchrUn_... | Banana | cytosol | 29.17 | 30.8 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 30.89 | 30.45 |
| OQU91407 | Sorghum | nucleus | 29.89 | 30.32 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 30.46 | 30.24 |
| Zm00001d035670_P001 | Maize | cytosol | 31.47 | 30.17 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 30.89 | 30.15 |
| EER91260 | Sorghum | nucleus | 31.18 | 30.1 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 31.03 | 29.88 |
| KXG38064 | Sorghum | nucleus | 30.89 | 29.86 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 30.03 | 29.69 |
| Zm00001d033166_P001 | Maize | nucleus | 31.18 | 29.64 |
| HORVU1Hr1G004440.1 | Barley | cytosol | 30.6 | 29.62 |
| EES18882 | Sorghum | cytosol | 31.18 | 29.6 |
| OQU91406 | Sorghum | nucleus | 31.75 | 29.55 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 30.32 | 29.51 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 30.46 | 29.4 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 30.46 | 29.36 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 30.17 | 29.33 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 30.32 | 29.26 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 30.17 | 28.97 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 29.89 | 28.81 |
| EES18880 | Sorghum | cytosol | 30.6 | 28.74 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 27.73 | 28.55 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 29.74 | 28.4 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 29.6 | 28.3 |
| AT2G04890.1 | Thale cress | cytosol | 16.38 | 27.6 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 28.59 | 26.29 |
| AT5G48150.4 | Thale cress | cytosol | 17.82 | 25.31 |
| AT4G17230.1 | Thale cress | cytosol | 18.97 | 24.95 |
| AT1G50600.2 | Thale cress | golgi, mitochondrion | 19.83 | 22.96 |
| AT1G21450.1 | Thale cress | nucleus | 17.1 | 20.07 |
| AT5G52510.1 | Thale cress | nucleus | 14.66 | 15.94 |
Protein Annotations
| MapMan:15.5.12 | EntrezGene:837266 | UniProt:A0A178W5Z6 | UniProt:A0A1P8AT25 | ProteinID:ANM59807.1 | ProteinID:ANM59808.1 |
| ProteinID:ANM59809.1 | ArrayExpress:AT1G07520 | EnsemblPlantsGene:AT1G07520 | RefSeq:AT1G07520 | TAIR:AT1G07520 | RefSeq:AT1G07520-TAIR-G |
| EnsemblPlants:AT1G07520.3 | Unigene:At.63938 | ncoils:Coil | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | RefSeq:NP_001322137.1 |
| RefSeq:NP_001322138.1 | RefSeq:NP_001322139.1 | ProteinID:OAP13141.1 | PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 |
| PANTHER:PTHR31636:SF129 | InterPro:TF_GRAS | UniParc:UPI0007E15E23 | SEG:seg | : | : |
Description
GRAS family transcription factor [Source:TAIR;Acc:AT1G07520]
Coordinates
chr1:-:2309536..2312385
Molecular Weight (calculated)
79386.8 Da
IEP (calculated)
5.323
GRAVY (calculated)
-0.474
Length
696 amino acids
Sequence
(BLAST)
(BLAST)
001: MMESNYSGVV NGYDVSFLPT SIPDLGFGVP SSSDFDLRMD QYYHQPSIWV PDQDHHFSPP ADEIDSENTL LKYVNQLLME ESLAEKQSIF YDSLALRQTE
101: EMLQQVISDS QTQSSIPNNS ITTSSSSNSG DYSNSSNSSV RIENEVLFDN KHLGDSGVVS FPGSNMLRGG EQFGQPANEI LVRSMFSDAE SVLQFKRGLE
201: EASKFLPNTD QWIFNLEPEM ERVVPVKVEE GWSAISKTRK NHHEREEEED DLEEARRRSK QFAVNEEDGK LTEMFDKVLL LDGECDPQII EDGENGSSKA
301: LVKKGRAKKK SRAVDFRTLL TLCAQSVSAG DKITADDLLR QIRKQCSPVG DASQRLAHFF ANALEARLEG STGTMIQSYY DSISSKKRTA AQILKSYSVF
401: LSASPFMTLI YFFSNKMILD AAKDASVLHI VDFGILYGFQ WPMFIQHLSK SNPGLRKLRI TGIEIPQHGL RPTERIQDTG RRLTEYCKRF GVPFEYNAIA
501: SKNWETIKME EFKIRPNEVL AVNAVLRFKN LRDVIPGEED CPRDGFLKLI RDMNPNVFLS STVNGSFNAP FFTTRFKEAL FHYSALFDLF GATLSKENPE
601: RIHFEGEFYG REVMNVIACE GVDRVERPET YKQWQVRMIR AGFKQKPVEA ELVQLFREKM KKWGYHKDFV LDEDSNWFLQ GWKGRILFSS SCWVPS
101: EMLQQVISDS QTQSSIPNNS ITTSSSSNSG DYSNSSNSSV RIENEVLFDN KHLGDSGVVS FPGSNMLRGG EQFGQPANEI LVRSMFSDAE SVLQFKRGLE
201: EASKFLPNTD QWIFNLEPEM ERVVPVKVEE GWSAISKTRK NHHEREEEED DLEEARRRSK QFAVNEEDGK LTEMFDKVLL LDGECDPQII EDGENGSSKA
301: LVKKGRAKKK SRAVDFRTLL TLCAQSVSAG DKITADDLLR QIRKQCSPVG DASQRLAHFF ANALEARLEG STGTMIQSYY DSISSKKRTA AQILKSYSVF
401: LSASPFMTLI YFFSNKMILD AAKDASVLHI VDFGILYGFQ WPMFIQHLSK SNPGLRKLRI TGIEIPQHGL RPTERIQDTG RRLTEYCKRF GVPFEYNAIA
501: SKNWETIKME EFKIRPNEVL AVNAVLRFKN LRDVIPGEED CPRDGFLKLI RDMNPNVFLS STVNGSFNAP FFTTRFKEAL FHYSALFDLF GATLSKENPE
601: RIHFEGEFYG REVMNVIACE GVDRVERPET YKQWQVRMIR AGFKQKPVEA ELVQLFREKM KKWGYHKDFV LDEDSNWFLQ GWKGRILFSS SCWVPS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.