Factsheet for TraesCS3B01G081100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G067900.1	Wheat	nucleus	92.31	95.65
TraesCS3A01G068000.1	Wheat	nucleus	94.55	94.41
HORVU3Hr1G012550.6	Barley	cytosol	73.57	88.25
TraesCS3B01G080900.1	Wheat	nucleus	76.78	76.14
TraesCS3B01G081000.1	Wheat	cytosol	77.34	75.96
OQU91407	Sorghum	nucleus	52.45	54.66
KXG38064	Sorghum	nucleus	54.27	53.89
EER91260	Sorghum	nucleus	54.13	53.68
Zm00001d033166_P001	Maize	nucleus	53.29	52.05
OQU91406	Sorghum	nucleus	53.85	51.47
CDX68389	Canola	cytosol	5.87	49.41
TraesCS1B01G037500.1	Wheat	cytosol	27.83	48.18
Solyc04g011630.1.1	Tomato	cytosol	11.33	47.65
VIT_06s0004g04990.t01	Wine grape	cytosol	28.25	45.7
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	19.44	43.85
CDX80265	Canola	endoplasmic reticulum, golgi	19.3	43.53
TraesCS1B01G037300.1	Wheat	cytosol	38.6	39.2
PGSC0003DMT400005480	Potato	cytosol	26.43	38.81
PGSC0003DMT400049420	Potato	cytosol	35.8	38.55
TraesCS1B01G037400.1	Wheat	cytosol	38.32	37.9
Bra015584.1-P	Field mustard	cytosol	22.94	37.61
GSMUA_Achr8P02550_001	Banana	nucleus	20.56	37.5
VIT_13s0019g01780.t01	Wine grape	nucleus	31.47	37.5
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	36.78	37.09
CDY71578	Canola	nucleus, plastid	26.99	37.04
Bra028391.1-P	Field mustard	nucleus	31.05	35.81
GSMUA_Achr6P34090_001	Banana	nucleus	30.63	35.78
CDY47877	Canola	nucleus	30.91	35.76
KRH10240	Soybean	cytosol	30.07	35.48
TraesCS1B01G037200.1	Wheat	nucleus	37.48	35.4
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	31.19	35.4
CDY39530	Canola	cytosol	30.63	35.38
VIT_06s0004g04970.t01	Wine grape	cytosol	32.45	35.26
TraesCS5B01G494500.1	Wheat	cytosol	32.17	35.01
PGSC0003DMT400016258	Potato	cytosol	35.52	34.89
KRH49113	Soybean	cytosol	35.8	34.88
KRH29773	Soybean	cytosol	29.93	34.85
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	32.73	34.77
CDY07777	Canola	cytosol, nucleus, peroxisome	32.73	34.77
KRG99969	Soybean	cytosol	35.8	34.74
CDX79750	Canola	peroxisome	32.73	34.72
Solyc10g086530.1.1	Tomato	cytosol	36.92	34.69
VIT_13s0019g01710.t01	Wine grape	cytosol	35.24	34.66
KRH65839	Soybean	cytosol, plastid	35.38	34.66
CDY33040	Canola	nucleus	28.81	34.51
VIT_13s0019g01810.t01	Wine grape	cytosol	36.08	34.49
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	31.05	34.37
VIT_06s0004g04980.t01	Wine grape	nucleus	33.71	34.23
TraesCS4B01G141200.1	Wheat	cytosol	26.99	34.04
Solyc09g010920.1.1	Tomato	cytosol	36.22	34.03
Bra033813.1-P	Field mustard	nucleus	27.69	34.02
KRH24780	Soybean	cytosol	31.33	33.94
Solyc05g053090.1.1	Tomato	cytosol	35.24	33.92
TraesCS5B01G138100.1	Wheat	cytosol, plastid	36.78	33.89
PGSC0003DMT400069949	Potato	cytosol	35.38	33.87
Solyc06g082530.1.1	Tomato	cytosol	30.91	33.84
TraesCS4B01G140800.1	Wheat	cytosol	27.97	33.84
PGSC0003DMT400022997	Potato	cytosol, plastid	35.94	33.77
KRH29774	Soybean	cytosol	29.79	33.76
CDY06266	Canola	cytosol	29.79	33.7
VIT_13s0019g01790.t01	Wine grape	cytosol	33.71	33.52
KRH23095	Soybean	cytosol	30.77	33.49
AT3G46600.1	Thale cress	cytosol	27.27	33.45
Solyc01g100200.2.1	Tomato	nucleus	31.05	33.33
AT2G37650.1	Thale cress	cytosol	33.43	33.29
VIT_13s0019g01700.t01	Wine grape	cytosol	35.24	33.16
KRH29775	Soybean	nucleus	31.19	33.14
KRH23094	Soybean	cytosol	25.59	33.09
KRH24773	Soybean	nucleus	31.75	33.04
PGSC0003DMT400078286	Potato	nucleus	30.77	32.98
AT5G59450.1	Thale cress	nucleus	28.11	32.95
CDX82987	Canola	nucleus	27.69	32.95
CDY47878	Canola	nucleus	31.61	32.71
KRH24775	Soybean	cytosol	31.05	32.65
CDX86475	Canola	nucleus	32.31	32.54
KRH29771	Soybean	cytosol	30.77	32.35
AT2G29060.1	Thale cress	cytosol	31.33	32.28
KRH24778	Soybean	nucleus	30.49	32.25
VIT_06s0004g04950.t01	Wine grape	cytosol	33.99	32.23
TraesCS4B01G336200.1	Wheat	cytosol	26.29	32.19
Bra028390.1-P	Field mustard	cytosol	31.75	32.15
TraesCS4B01G141100.1	Wheat	cytosol	28.25	32.11
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	33.15	31.9
Bra031581.1-P	Field mustard	cytosol	29.79	31.89
GSMUA_AchrUn_...	Banana	cytosol	29.37	31.87
CDX77228	Canola	cytosol	29.79	31.7
KRH10241	Soybean	cytosol, nucleus, peroxisome	30.35	31.54
CDY06265	Canola	cytosol	30.21	31.3
KRH23089	Soybean	cytosol	28.11	31.21
CDY15616	Canola	nucleus	31.19	31.19
Bra031580.1-P	Field mustard	cytosol	30.07	31.16
KRH29779	Soybean	cytosol	32.31	31.13
Bra030688.1-P	Field mustard	nucleus	32.17	30.96
TraesCS3B01G392600.1	Wheat	cytosol	35.24	30.92
Bra035653.1-P	Field mustard	cytosol	31.19	30.89
Solyc06g076280.1.1	Tomato	cytosol	32.17	30.75
TraesCS4B01G141400.1	Wheat	cytosol	28.39	30.71
CDY31749	Canola	cytosol	31.05	30.58
CDY09912	Canola	cytosol	29.93	30.57
KRH10243	Soybean	nucleus	28.39	30.53
PGSC0003DMT400077972	Potato	cytosol	32.03	30.45
CDX68388	Canola	cytosol	17.62	30.43
TraesCS4B01G141300.1	Wheat	cytosol	28.67	30.42
AT1G07520.3	Thale cress	cytosol	29.51	30.32
KRH23090	Soybean	vacuole	26.15	30.11
AT1G07530.1	Thale cress	cytosol	31.75	29.52
TraesCS7B01G077800.1	Wheat	cytosol	29.51	28.71
VIT_06s0004g04960.t01	Wine grape	nucleus	31.33	28.11
TraesCS7B01G078300.1	Wheat	cytosol	28.81	27.91
CDY09911	Canola	nucleus	21.96	26.88
TraesCS4B01G141500.1	Wheat	peroxisome	29.09	25.77
TraesCS2B01G217500.1	Wheat	cytosol	18.18	23.47
TraesCS3B01G441600.1	Wheat	cytosol	17.9	23.19
TraesCS4B01G266700.1	Wheat	cytosol	16.36	21.79
TraesCS2B01G239400.1	Wheat	cytosol	17.06	21.4
TraesCS2B01G413500.1	Wheat	cytosol	14.41	16.32

Protein Annotations

EnsemblPlants:TraesCS3B01G081100.1	EnsemblPlantsGene:TraesCS3B01G081100	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636	PANTHER:PTHR31636:SF60
PFAM:PF03514	PFscan:PS50985	SEG:seg	MapMan:15.5.12	:	:

Description

No Description!

Coordinates

chr3B:+:51159838..51161985

Molecular Weight (calculated)

81111.1 Da

IEP (calculated)

7.435

GRAVY (calculated)

-0.416

Length

715 amino acids

Sequence
(BLAST)

001: MANTAGCGAY CSQEFIESST AKYNDSEFIL HPPAPMSYYP QLSIVSNKVG RVSWDTSSSC KIYSPQLYSV NCDETSAGWR LISVAEHPKT DSDVTLSHIE
101: QMLMQDTDDK VRAPPGETAI RTMEEPFYEL LGQKYPVLPG LLPLCGCDRL KNLNGSVCRL NNGQLCNNCS VKISSDNYHS NGSSQASQAP WSLSAIVGEA
201: IQFPLGVEKM GIGLNINGLS ISPESHSPHM NDKDTIKHAP FHGRSRKVFP GIEELDLLEG RRNKQIAIFS DEPVRNEVFD KVLLCSENKP VDEDIILQRG
301: MADISTKYAQ KEQGRKPARR MKRGKTRKKK EVVDLRSLLI HCAEAVSVNN RSLASDILKS IRQHCSPSGD DTQRLAFYLA DCLEIRLSGS GSHINQKVIT
401: TPTNAAHILK LCHLCFTVCP YLRSSYYLSN KTILDVSKGK PRVHIIDFGI FYGFQWPSLL KQFSDREGGP PKLRITGIEL PTPGFRPDEM NKNTRLRLTE
501: YADIFQVPLE YQQISSKWES ISIEELNIDK DEVLVVNCIL RMKNVGDETI TIDCARNRVL NTIRMMKPTI FIHGVVNGSY NTPFFLSRFK EVMYHYTSMF
601: DMLDKTTPRD NETRMILERD IYKYAILNAI ACEGSERIER PESYKKWNAR SVRARFEQLP LNPTIVKGIQ SMVRQIYHKD FFVDEEDQCL VLGWKGRILY
701: ALSTWKPSEC EDEDD

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.